Conservation of cofitness between PGA1_c20570 and PGA1_c21840 in Phaeobacter inhibens DSM 17395

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Phaeobacter inhibens DSM 17395 1.0 PGA1_c20570 queuine tRNA-ribosyltransferase Tgt 1.0 PGA1_c21840 guanine deaminase GuaD 0.32 14
Dinoroseobacter shibae DFL-12 0.80 Dshi_2346 queuine tRNA-ribosyltransferase (RefSeq) 0.67 Dshi_2771 Guanine deaminase (RefSeq) low > 64
Azospirillum sp. SherDot2 0.66 MPMX19_01697 Queuine tRNA-ribosyltransferase 0.44 MPMX19_05617 Guanine deaminase low > 112
Caulobacter crescentus NA1000 0.64 CCNA_01659 queuine tRNA-ribosyltransferase 0.44 CCNA_02699 guanine deaminase — —
Caulobacter crescentus NA1000 Δfur 0.64 CCNA_01659 queuine tRNA-ribosyltransferase 0.44 CCNA_02699 guanine deaminase low > 67
Rhizobium sp. OAE497 0.63 ABIE40_RS09435 tRNA guanosine(34) transglycosylase Tgt 0.47 ABIE40_RS25220 guanine deaminase low > 107
Sinorhizobium meliloti 1021 0.62 SMc01206 queuine tRNA-ribosyltransferase 0.46 SM_b21293 guanine deaminase low > 103
Bosea sp. OAE506 0.62 ABIE41_RS18290 tRNA guanosine(34) transglycosylase Tgt 0.44 ABIE41_RS21745 guanine deaminase low > 77
Agrobacterium fabrum C58 0.62 Atu1677 queuine tRNA-ribosyltransferase 0.45 Atu2315 guanine deaminase low > 89
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.45 PfGW456L13_4087 Guanine deaminase (EC 3.5.4.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_15790 queuine tRNA-ribosyltransferase 0.45 AO353_00745 guanine deaminase — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.44 Pf1N1B4_3850 Guanine deaminase (EC 3.5.4.3) low > 87
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.44 PFLU_RS22515 guanine deaminase low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS24900 tRNA guanosine(34) transglycosylase Tgt 0.44 PFLU_RS22515 guanine deaminase low > 109
Pseudomonas simiae WCS417 0.55 PS417_23245 queuine tRNA-ribosyltransferase 0.44 PS417_20900 guanine deaminase — —
Pseudomonas sp. RS175 0.55 PFR28_00277 Queuine tRNA-ribosyltransferase 0.45 PFR28_01061 Guanine deaminase low > 88
Alteromonas macleodii MIT1002 0.55 MIT1002_02813 Queuine tRNA-ribosyltransferase 0.39 MIT1002_01570 Guanine deaminase low > 70
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_06690 queuine tRNA-ribosyltransferase 0.44 AO356_02575 guanine deaminase low > 104
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.44 Pf6N2E2_2339 Guanine deaminase (EC 3.5.4.3) low > 103
Pseudomonas putida KT2440 0.54 PP_0833 queuine tRNA-ribosyltransferase 0.44 PP_4281 guanine deaminase low > 96
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_1228 tRNA-guanine transglycosylase 0.45 Psyr_1812 guanine deaminase — —
Pseudomonas stutzeri RCH2 0.54 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.46 Psest_1208 guanine deaminase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_1228 tRNA-guanine transglycosylase 0.45 Psyr_1812 guanine deaminase — —
Rahnella sp. WP5 0.53 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.40 EX31_RS07035 guanine deaminase low > 89
Serratia liquefaciens MT49 0.53 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.41 IAI46_11780 guanine deaminase low > 86
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS06175 queuine tRNA-ribosyltransferase 0.43 HSERO_RS16335 guanine deaminase low > 78
Castellaniella sp019104865 MT123 0.52 ABCV34_RS15365 tRNA guanosine(34) transglycosylase Tgt 0.41 ABCV34_RS12195 guanine deaminase low > 48
Enterobacter sp. TBS_079 0.52 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.43 MPMX20_01658 Guanine deaminase low > 85
Enterobacter asburiae PDN3 0.52 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.43 EX28DRAFT_1948 guanine deaminase (EC 3.5.4.3) low > 76
Dickeya dadantii 3937 0.52 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.43 DDA3937_RS12145 guanine deaminase low > 74
Dickeya dianthicola 67-19 0.52 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.43 HGI48_RS12240 guanine deaminase low > 71
Klebsiella michiganensis M5al 0.52 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.43 BWI76_RS10520 guanine deaminase — —
Dickeya dianthicola ME23 0.52 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.43 DZA65_RS12690 guanine deaminase low > 75
Lysobacter sp. OAE881 0.51 ABIE51_RS15020 tRNA guanosine(34) transglycosylase Tgt 0.48 ABIE51_RS09675 guanine deaminase low > 62
Pantoea sp. MT58 0.51 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.40 IAI47_09810 guanine deaminase low > 76
Escherichia coli ECRC62 0.51 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.42 BNILDI_10080 guaD guanine deaminase — —
Escherichia coli ECRC99 0.51 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 0.41 KEDOAH_08510 guaD guanine deaminase — —
Escherichia coli BW25113 0.51 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 0.41 b2883 guaD guanine deaminase (NCBI) low > 76
Escherichia coli BL21 0.51 ECD_00354 tRNA-guanine transglycosylase 0.42 ECD_02716 guanine deaminase low > 60
Escherichia fergusonii Becca 0.51 EFB2_03651 Queuine tRNA-ribosyltransferase 0.41 EFB2_01018 Guanine deaminase low > 86
Escherichia coli ECRC102 0.51 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 0.41 NIAGMN_17395 guaD guanine deaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 0.41 OHPLBJKB_00832 Guanine deaminase low > 73
Escherichia coli ECRC101 0.51 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.41 OKFHMN_19625 guaD guanine deaminase — —
Escherichia coli ECOR38 0.51 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 0.42 HEPCGN_18915 guaD guanine deaminase low > 85
Escherichia coli ECOR27 0.51 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 0.42 NOLOHH_11555 guaD guanine deaminase low > 57
Escherichia coli Nissle 1917 0.51 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 0.41 ECOLIN_RS16065 guanine deaminase — —
Escherichia coli ECRC101 0.51 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 0.41 MCAODC_10150 guaD guanine deaminase — —
Escherichia coli ECRC98 0.51 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 0.41 JDDGAC_23270 guaD guanine deaminase — —
Acinetobacter radioresistens SK82 0.51 MPMX26_00438 Queuine tRNA-ribosyltransferase 0.44 MPMX26_03062 Guanine deaminase low > 36
Paraburkholderia bryophila 376MFSha3.1 0.51 H281DRAFT_04670 tRNA-guanine transglycosylase 0.46 H281DRAFT_03965 guanine deaminase low > 103
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS26640 tRNA guanosine(34) transglycosylase Tgt 0.45 QEN71_RS03900 guanine deaminase low > 153
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS03410 queuine tRNA-ribosyltransferase 0.46 BPHYT_RS15100 guanine deaminase low > 109
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS17400 queuine tRNA-ribosyltransferase 0.44 RR42_RS05320 guanine deaminase low > 128
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS01280 tRNA guanosine(34) transglycosylase Tgt 0.44 ABZR87_RS15060 guanine deaminase low > 80
Ralstonia solanacearum GMI1000 0.49 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt 0.45 RS_RS10530 guanine deaminase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF2798 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.39 GFF213 Guanine deaminase (EC 3.5.4.3) low > 90
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS05685 tRNA guanosine(34) transglycosylase Tgt 0.44 RALBFv3_RS03160 guanine deaminase low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS07940 tRNA guanosine(34) transglycosylase Tgt 0.44 UW163_RS10565 guanine deaminase — —
Acidovorax sp. GW101-3H11 0.47 Ac3H11_861 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.41 Ac3H11_1117 Guanine deaminase (EC 3.5.4.3) low > 79
Variovorax sp. SCN45 0.47 GFF5534 Queuine tRNA-ribosyltransferase (EC 2.4.2.29) 0.39 GFF1914 Guanine deaminase (EC 3.5.4.3) low > 127
Variovorax sp. OAS795 0.47 ABID97_RS01595 tRNA guanosine(34) transglycosylase Tgt 0.40 ABID97_RS22045 guanine deaminase 0.55 1
Ralstonia solanacearum PSI07 0.46 RPSI07_RS11615 tRNA guanosine(34) transglycosylase Tgt 0.44 RPSI07_RS14150 guanine deaminase low > 81
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS01080 tRNA guanosine(34) transglycosylase Tgt 0.39 HMPREF1078_RS02225 guanine deaminase low > 61

Not shown: 37 genomes with orthologs for PGA1_c20570 only; 1 genomes with orthologs for PGA1_c21840 only