Conservation of cofitness between GFF4032 and GFF2000 in Hydrogenophaga sp. GW460-11-11-14-LB1

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Hydrogenophaga sp. GW460-11-11-14-LB1 1.0 GFF4032 Probable Co/Zn/Cd efflux system membrane fusion protein 1.0 GFF2000 Uracil permease 0.55 19
Acidovorax sp. GW101-3H11 0.57 Ac3H11_932 Probable Co/Zn/Cd efflux system membrane fusion protein 0.83 Ac3H11_4891 Uracil permease low > 79
Variovorax sp. OAS795 0.49 ABID97_RS17620 efflux RND transporter periplasmic adaptor subunit 0.81 ABID97_RS03010 solute carrier family 23 protein low > 91
Variovorax sp. SCN45 0.47 GFF494 RND efflux system, membrane fusion protein 0.86 GFF3368 Pyrimidine permease low > 127
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS07910 RND transporter MFP subunit 0.61 RR42_RS04530 pyrimidine permease low > 128
Dechlorosoma suillum PS 0.33 Dsui_0409 RND family efflux transporter, MFP subunit 0.26 Dsui_2332 uracil-xanthine permease low > 51
Azospirillum sp. SherDot2 0.31 MPMX19_05261 Multidrug resistance protein MdtE 0.56 MPMX19_02961 Putative pyrimidine permease RutG low > 112
Agrobacterium fabrum C58 0.28 Atu5382 HlyD family secretion protein 0.57 Atu3076 uracil transport protein — —
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_16360 RND transporter 0.27 AO353_14850 uracil transporter low > 101
Acinetobacter radioresistens SK82 0.28 MPMX26_03011 Multidrug resistance protein MdtA 0.59 MPMX26_03014 Putative pyrimidine permease RutG low > 36
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_4731 RND efflux membrane fusion protein 0.27 PfGW456L13_1596 Uracil permease low > 87
Pseudomonas sp. S08-1 0.27 OH686_06745 Multidrug efflux system, membrane fusion component 0.29 OH686_17980 Uracil permease or Uracil:proton symporter UraA low > 80
Enterobacter sp. TBS_079 0.27 MPMX20_02161 Multidrug resistance protein MdtA 0.68 MPMX20_01693 Putative pyrimidine permease RutG low > 85
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3062 RND efflux membrane fusion protein 0.27 Pf1N1B4_2933 Uracil permease low > 87
Pseudomonas simiae WCS417 0.26 PS417_01045 RND transporter 0.27 PS417_04430 uracil transporter low > 88
Pseudomonas fluorescens SBW25 0.26 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit 0.27 PFLU_RS04480 uracil-xanthine permease low > 109
Pseudomonas sp. RS175 0.26 PFR28_00378 Multidrug resistance protein MdtA 0.26 PFR28_03642 Uracil permease low > 88
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit 0.27 PFLU_RS04480 uracil-xanthine permease low > 109
Enterobacter asburiae PDN3 0.26 EX28DRAFT_1392 RND family efflux transporter, MFP subunit 0.66 EX28DRAFT_1920 pyrimidine utilization transport protein G low > 76
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_06135 RND transporter 0.26 AO356_16560 uracil transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_3950 Efflux membrane fusion protein, RND family 0.27 Pf6N2E2_5234 Uracil permease low > 103
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_05877 RND family efflux transporter, MFP subunit 0.69 H281DRAFT_02126 uracil-xanthine permease low > 103
Pantoea sp. MT58 0.24 IAI47_07205 efflux RND transporter periplasmic adaptor subunit 0.66 IAI47_12535 pyrimidine utilization transport protein G low > 76
Azospirillum brasilense Sp245 0.24 AZOBR_RS04610 hypothetical protein 0.25 AZOBR_RS31675 uracil transporter low > 97
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2193 Secretion protein HlyD 0.28 Psyr_0968 Xanthine/uracil permease family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2193 Secretion protein HlyD 0.28 Psyr_0968 Xanthine/uracil permease family low > 86
Pseudomonas putida KT2440 0.23 PP_1516 RND membrane fusion protein 0.27 PP_0745 putative uracil permease low > 96
Pectobacterium carotovorum WPP14 0.22 HER17_RS07535 efflux RND transporter periplasmic adaptor subunit 0.31 HER17_RS15455 uracil permease low > 75
Dickeya dadantii 3937 0.22 DDA3937_RS03815 efflux RND transporter periplasmic adaptor subunit 0.31 DDA3937_RS06035 uracil permease low > 74
Dickeya dianthicola 67-19 0.22 HGI48_RS07920 efflux RND transporter periplasmic adaptor subunit 0.31 HGI48_RS06080 uracil permease low > 71
Dickeya dianthicola ME23 0.22 DZA65_RS08515 efflux RND transporter periplasmic adaptor subunit 0.31 DZA65_RS06430 uracil permease low > 75
Pseudomonas stutzeri RCH2 0.22 Psest_1565 RND family efflux transporter, MFP subunit 0.28 Psest_1119 uracil-xanthine permease low > 67
Rahnella sp. WP5 0.21 EX31_RS17705 efflux RND transporter periplasmic adaptor subunit 0.64 EX31_RS24060 pyrimidine utilization transport protein G low > 89
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS11370 RND transporter MFP subunit 0.69 BPHYT_RS01995 pyrimidine permease low > 109
Paraburkholderia graminis OAS925 0.20 ABIE53_002353 multidrug efflux system membrane fusion protein 0.69 ABIE53_000545 putative pyrimidine permease RutG low > 113
Bosea sp. OAE506 0.20 ABIE41_RS18640 efflux RND transporter periplasmic adaptor subunit 0.59 ABIE41_RS13010 uracil-xanthine permease family protein low > 77
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS01320 RND transporter MFP subunit 0.72 HSERO_RS18085 pyrimidine permease low > 78
Klebsiella michiganensis M5al 0.20 BWI76_RS05715 RND family efflux transporter MFP subunit 0.69 BWI76_RS10750 pyrimidine utilization transport protein G low > 92
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS07195 efflux RND transporter periplasmic adaptor subunit 0.70 QEN71_RS00925 solute carrier family 23 protein low > 153
Shewanella sp. ANA-3 0.17 Shewana3_3848 RND family efflux transporter MFP subunit (RefSeq) 0.23 Shewana3_1641 uracil-xanthine permease (RefSeq) low > 73
Shewanella amazonensis SB2B 0.16 Sama_2342 secretion protein HlyD (RefSeq) 0.23 Sama_1918 uracil-xanthine permease (RefSeq) low > 62
Shewanella loihica PV-4 0.16 Shew_0467 RND family efflux transporter MFP subunit (RefSeq) 0.23 Shew_1836 uracil-xanthine permease (RefSeq) low > 60
Shewanella oneidensis MR-1 0.16 SO3278 conserved hypothetical protein (NCBI ptt file) 0.23 SO2879 uraA uracil permease (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.15 CSW01_08420 efflux RND transporter periplasmic adaptor subunit 0.26 CSW01_10810 uracil permease low > 62
Marinobacter adhaerens HP15 0.15 HP15_1119 efflux transporter, RND family, MFP subunit 0.28 HP15_2307 xanthine/uracil permease low > 73
Parabacteroides merdae CL09T00C40 0.15 HMPREF1078_RS01915 efflux RND transporter periplasmic adaptor subunit 0.28 HMPREF1078_RS08125 uracil-xanthine permease family protein low > 61
Bacteroides thetaiotaomicron VPI-5482 0.14 BT2119 transmembrane protein precursor, possibly involved in transport (NCBI ptt file) 0.29 BT0686 putative uracil permease (uracil transporter) (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.13 BACOVA_04447 efflux transporter, RND family, MFP subunit 0.29 BACOVA_02389 putative permease low > 94
Fusobacterium nucleatum SB010 0.12 HUW76_07490 efflux RND transporter periplasmic adaptor subunit 0.30 HUW76_06000 uracil-xanthine permease low > 35

Not shown: 18 genomes with orthologs for GFF4032 only; 20 genomes with orthologs for GFF2000 only