Conservation of cofitness between HP15_2550 and HP15_1540 in Marinobacter adhaerens HP15

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Marinobacter adhaerens HP15 1.0 HP15_2550 fumarylacetoacetate hydrolase family protein 1.0 HP15_1540 protein YfcK 0.34 17
Pseudomonas sp. S08-1 0.58 OH686_11290 Fumarylacetoacetate hydrolase family protein 0.33 OH686_20990 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 80
Pseudomonas stutzeri RCH2 0.57 Psest_3871 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 0.33 Psest_1634 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain low > 67
Pseudomonas putida KT2440 0.53 PP_5153 putative isomerase/hydrolase 0.30 PP_1751 methyltransferase/FAD-dependent oxidoreductase low > 96
Pseudomonas simiae WCS417 0.53 PS417_27030 hypothetical protein 0.33 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase — —
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_3934 Fumarylacetoacetate hydrolase family protein 0.33 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 103
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_10310 hypothetical protein 0.33 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 104
Pseudomonas fluorescens GW456-L13 0.52 PfGW456L13_945 Fumarylacetoacetate hydrolase family protein 0.34 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 87
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_2275 Fumarylacetoacetate hydrolase family protein 0.33 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 87
Pseudomonas sp. RS175 0.52 PFR28_04840 putative protein YcgM 0.35 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 88
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_08500 hypothetical protein 0.33 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 101
Pseudomonas fluorescens SBW25 0.52 PFLU_RS28685 fumarylacetoacetate hydrolase family protein 0.34 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS28685 fumarylacetoacetate hydrolase family protein 0.34 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Enterobacter sp. TBS_079 0.51 MPMX20_02705 putative protein YcgM 0.27 MPMX20_03259 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 85
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_4850 Fumarylacetoacetate (FAA) hydrolase 0.33 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_4850 Fumarylacetoacetate (FAA) hydrolase 0.33 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 low > 86
Escherichia coli ECOR38 0.51 HEPCGN_24690 ycgM fumarylacetoacetate hydrolase family protein 0.28 HEPCGN_21845 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia coli BL21 0.51 ECD_01155 putative isomerase/hydrolase 0.28 ECD_02249 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme 0.30 35
Escherichia coli ECRC99 0.51 KEDOAH_25255 ycgM fumarylacetoacetate hydrolase family protein 0.28 KEDOAH_05555 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Escherichia coli ECRC100 0.51 OKFHMN_28240 ycgM fumarylacetoacetate hydrolase family protein 0.28 OKFHMN_22640 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Escherichia coli BW25113 0.51 b1180 ycgM predicted isomerase/hydrolase (NCBI) 0.28 b2324 b2324 putative peptidase (VIMSS) low > 76
Escherichia coli ECOR27 0.51 NOLOHH_20780 ycgM fumarylacetoacetate hydrolase family protein 0.29 NOLOHH_14275 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Escherichia coli ECRC98 0.51 JDDGAC_06270 ycgM fumarylacetoacetate hydrolase family protein 0.28 JDDGAC_26600 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_02511 putative protein YcgM 0.28 OHPLBJKB_01381 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 73
Escherichia coli ECRC102 0.51 NIAGMN_27980 ycgM fumarylacetoacetate hydrolase family protein 0.28 NIAGMN_20415 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF2814 FIG094199: Fumarylacetoacetate hydrolase 0.27 GFF1945 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 78
Escherichia coli ECRC62 0.51 BNILDI_18940 ycgM fumarylacetoacetate hydrolase family protein 0.28 BNILDI_13195 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Enterobacter asburiae PDN3 0.51 EX28DRAFT_0760 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 0.28 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain low > 76
Escherichia coli Nissle 1917 0.51 ECOLIN_RS07140 fumarylacetoacetate hydrolase family protein 0.29 ECOLIN_RS13465 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 55
Escherichia coli ECRC101 0.51 MCAODC_21930 ycgM fumarylacetoacetate hydrolase family protein 0.28 MCAODC_13680 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia fergusonii Becca 0.51 EFB2_02751 putative protein YcgM 0.28 EFB2_01534 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 86
Klebsiella michiganensis M5al 0.50 BWI76_RS17770 isomerase/hydrolase 0.26 BWI76_RS20410 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 92
Pectobacterium carotovorum WPP14 0.49 HER17_RS11245 fumarylacetoacetate hydrolase family protein 0.27 HER17_RS06960 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Dickeya dadantii 3937 0.49 DDA3937_RS11195 fumarylacetoacetate hydrolase family protein 0.25 DDA3937_RS14515 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 74
Erwinia tracheiphila SCR3 0.49 LU632_RS13105 fumarylacetoacetate hydrolase family protein 0.27 LU632_RS07800 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 74
Rahnella sp. WP5 0.49 EX31_RS10565 fumarylacetoacetate hydrolase family protein 0.26 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 89
Dickeya dianthicola 67-19 0.48 HGI48_RS11230 fumarylacetoacetate hydrolase family protein 0.27 HGI48_RS14485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 71
Dickeya dianthicola ME23 0.48 DZA65_RS11575 fumarylacetoacetate hydrolase family protein 0.27 DZA65_RS15420 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Alteromonas macleodii MIT1002 0.48 MIT1002_02584 Ureidoglycolate lyase 0.20 MIT1002_02542 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 70
Pantoea sp. MT58 0.48 IAI47_08865 fumarylacetoacetate hydrolase family protein 0.27 IAI47_06175 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Serratia liquefaciens MT49 0.47 IAI46_14500 fumarylacetoacetate hydrolase family protein 0.27 IAI46_18000 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 86
Acinetobacter radioresistens SK82 0.38 MPMX26_02677 putative protein YcgM 0.23 MPMX26_02642 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 36
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2024 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 0.17 B158DRAFT_1306 Uncharacterized conserved protein low > 40
Castellaniella sp019104865 MT123 0.34 ABCV34_RS04400 fumarylacetoacetate hydrolase family protein 0.18 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 48
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS01965 5-carboxymethyl-2-hydroxymuconate isomerase 0.19 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 128
Variovorax sp. SCN45 0.33 GFF1928 Fumarylacetoacetate hydrolase family protein 0.19 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 127
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS06915 fumarylacetoacetate hydrolase family protein 0.24 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Caulobacter crescentus NA1000 0.32 CCNA_03682 fumarylpyruvate hydrolase 0.18 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 66
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_03682 fumarylpyruvate hydrolase 0.18 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC low > 67
Ralstonia solanacearum PSI07 0.32 RPSI07_RS22260 FAA hydrolase family protein 0.23 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 81
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS11045 FAA hydrolase family protein 0.23 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Ralstonia solanacearum UW163 0.31 UW163_RS02535 FAA hydrolase family protein 0.23 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Ralstonia solanacearum GMI1000 0.31 RS_RS01890 FAA hydrolase family protein 0.24 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Acidovorax sp. GW101-3H11 0.31 Ac3H11_2308 Fumarylacetoacetate hydrolase family protein 0.17 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 79
Variovorax sp. OAS795 0.31 ABID97_RS04260 fumarylacetoacetate hydrolase family protein 0.20 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 91
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_01971 fumarylpyruvate hydrolase 0.25 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 103
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_19130 FAA hydrolase family protein 0.27 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 62
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS01650 fumarylacetoacetate hydrolase family protein 0.24 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 153
Paraburkholderia graminis OAS925 0.30 ABIE53_000698 fumarylpyruvate hydrolase 0.26 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 113
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS17860 5-carboxymethyl-2-hydroxymuconate isomerase 0.15 HSERO_RS23825 hypothetical protein low > 78
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS02800 5-carboxymethyl-2-hydroxymuconate isomerase 0.26 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 109
Shewanella oneidensis MR-1 0.28 SO1585 fumarylacetoacetate hydrolase family protein (NCBI ptt file) 0.10 SO3073 conserved hypothetical protein (NCBI ptt file) low > 76
Dechlorosoma suillum PS 0.28 Dsui_1428 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase 0.26 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein low > 51
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS12090 fumarylacetoacetate hydrolase family protein 0.21 A4249_RS15340 tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD low > 48

Not shown: 32 genomes with orthologs for HP15_2550 only; 1 genomes with orthologs for HP15_1540 only