Conservation of cofitness between Psest_0998 and Psest_1492 in Pseudomonas stutzeri RCH2

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0998 poly(A) polymerase 1.0 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) 0.24 16
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_16070 poly(A) polymerase 0.84 AO356_17990 ferritin low > 104
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_5155 Poly(A) polymerase (EC 2.7.7.19) 0.84 Pf6N2E2_5529 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 103
Pseudomonas sp. RS175 0.77 PFR28_03719 Poly(A) polymerase I 0.84 PFR28_03419 DNA protection during starvation protein 2 low > 88
Pseudomonas simiae WCS417 0.77 PS417_23900 poly(A) polymerase 0.85 PS417_22480 ferritin low > 88
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.85 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Pseudomonas fluorescens SBW25 0.76 PFLU_RS25740 polynucleotide adenylyltransferase PcnB 0.85 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_0830 Poly(A) polymerase 0.84 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_0830 Poly(A) polymerase 0.84 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas sp. S08-1 0.76 OH686_17255 Poly(A) polymerase 0.95 OH686_19105 DNA protection during starvation protein low > 80
Pseudomonas putida KT2440 0.72 PP_4697 poly(A) polymerase 0.81 PP_1210 DNA-binding stress protein low > 96
Marinobacter adhaerens HP15 0.47 HP15_326 polyA polymerase 0.31 HP15_3253 ferritin-like DNA-binding protein low > 73
Alteromonas macleodii MIT1002 0.43 MIT1002_03692 Poly(A) polymerase I precursor 0.64 MIT1002_00525 DNA protection during starvation protein 2 low > 70
Shewanella sp. ANA-3 0.43 Shewana3_3406 poly(A) polymerase (RefSeq) 0.67 Shewana3_0985 Ferritin, Dps family protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.43 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) 0.61 Sama_2598 Dps family protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.43 SO0872 pcnB polyA polymerase (NCBI ptt file) 0.66 SO1158 Dps family protein (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.42 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB 0.32 DDA3937_RS06890 DNA starvation/stationary phase protection protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_03145 polynucleotide adenylyltransferase PcnB 0.26 CSW01_00700 DNA starvation/stationary phase protection protein low > 62
Dickeya dianthicola ME23 0.42 DZA65_RS17145 polynucleotide adenylyltransferase PcnB 0.31 DZA65_RS07220 DNA starvation/stationary phase protection protein low > 75
Serratia liquefaciens MT49 0.42 IAI46_21220 polynucleotide adenylyltransferase PcnB 0.32 IAI46_14135 DNA starvation/stationary phase protection protein low > 86
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3054.1 Poly(A) polymerase (EC 2.7.7.19) 0.62 Xcc-8004.1478.1 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) 0.30 18
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS03620 poly(A) polymerase 0.80 BPHYT_RS03480 ferritin low > 109
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_0058 poly(A) polymerase 0.66 B158DRAFT_0476 DNA-binding ferritin-like protein (oxidative damage protectant) low > 40
Dickeya dianthicola 67-19 0.42 HGI48_RS16060 polynucleotide adenylyltransferase PcnB 0.32 HGI48_RS06880 DNA starvation/stationary phase protection protein low > 71
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS17235 poly(A) polymerase 0.83 RR42_RS17370 ferritin — —
Lysobacter sp. OAE881 0.41 ABIE51_RS08015 polynucleotide adenylyltransferase PcnB 0.66 ABIE51_RS05150 Dps family protein low > 62
Enterobacter asburiae PDN3 0.41 EX28DRAFT_3732 poly(A) polymerase 0.16 EX28DRAFT_2174 DNA-binding ferritin-like protein (oxidative damage protectant) low > 76
Enterobacter sp. TBS_079 0.41 MPMX20_00829 Poly(A) polymerase I 0.16 MPMX20_01442 DNA protection during starvation protein low > 85
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS05300 polynucleotide adenylyltransferase PcnB 0.74 RALBFv3_RS05595 DNA starvation/stationary phase protection protein low > 76
Ralstonia solanacearum GMI1000 0.41 RS_RS13165 polynucleotide adenylyltransferase PcnB 0.74 RS_RS13455 DNA starvation/stationary phase protection protein low > 80
Klebsiella michiganensis M5al 0.41 BWI76_RS05005 polynucleotide adenylyltransferase 0.16 BWI76_RS08980 DNA starvation/stationary phase protection protein low > 92
Castellaniella sp019104865 MT123 0.41 ABCV34_RS08810 polynucleotide adenylyltransferase PcnB 0.69 ABCV34_RS03580 Dps family protein low > 48
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.40 GFF89 Poly(A) polymerase (EC 2.7.7.19) 0.16 GFF707 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 78
Escherichia coli Nissle 1917 0.40 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB 0.16 ECOLIN_RS04330 DNA starvation/stationary phase protection protein Dps — —
Rhodanobacter denitrificans MT42 0.40 LRK55_RS14820 polynucleotide adenylyltransferase PcnB 0.62 LRK55_RS12415 Dps family protein low > 63
Ralstonia solanacearum PSI07 0.40 RPSI07_RS12000 polynucleotide adenylyltransferase PcnB 0.74 RPSI07_RS11705 DNA starvation/stationary phase protection protein low > 81
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS15105 polynucleotide adenylyltransferase PcnB 0.63 LRK54_RS12710 DNA starvation/stationary phase protection protein low > 59
Pantoea sp. MT58 0.40 IAI47_15645 polynucleotide adenylyltransferase PcnB 0.18 IAI47_13195 DNA starvation/stationary phase protection protein Dps low > 76
Erwinia tracheiphila SCR3 0.40 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB 0.18 LU632_RS09460 dps DNA starvation/stationary phase protection protein Dps low > 74
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS00935 polynucleotide adenylyltransferase PcnB 0.75 ABZR87_RS01245 Dps family protein low > 80
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_03875 pcnB tRNA nucleotidyltransferase/poly(A) polymerase 0.63 OKGIIK_02150 dps DNA-binding ferritin-like protein (oxidative damage protectant) low > 52
Dechlorosoma suillum PS 0.39 Dsui_1515 poly(A) polymerase 0.72 Dsui_0822 DNA-binding ferritin-like protein (oxidative damage protectant) low > 51
Dyella japonica UNC79MFTsu3.2 0.39 ABZR86_RS00805 polynucleotide adenylyltransferase PcnB 0.63 ABZR86_RS19715 Dps family protein low > 74
Acidovorax sp. GW101-3H11 0.36 Ac3H11_1313 Poly(A) polymerase (EC 2.7.7.19) 0.71 Ac3H11_786 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF3438 Poly(A) polymerase (EC 2.7.7.19) 0.70 GFF2804 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 90
Acinetobacter radioresistens SK82 0.33 MPMX26_00543 Poly(A) polymerase I 0.71 MPMX26_01495 DNA protection during starvation protein 2 low > 36

Not shown: 17 genomes with orthologs for Psest_0998 only; 29 genomes with orthologs for Psest_1492 only