Conservation of cofitness between Psest_3988 and Psest_1473 in Pseudomonas stutzeri RCH2

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 1.0 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.48 3
Pseudomonas sp. S08-1 0.83 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.73 OH686_18990 phosphoribosylglycinamide formyltransferase 0.51 51
Pseudomonas fluorescens FW300-N2E2 0.82 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.71 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.33 15
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] 0.71 AO356_19085 phosphoribosylglycinamide formyltransferase 0.51 10
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.71 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.65 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.71 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas sp. RS175 0.81 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.72 PFR28_03218 Phosphoribosylglycinamide formyltransferase 0.32 30
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.71 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.70 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.49 5
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.72 AO353_02685 phosphoribosylglycinamide formyltransferase 0.42 51
Pseudomonas simiae WCS417 0.79 PS417_01210 hypothetical protein 0.70 PS417_20125 phosphoribosylglycinamide formyltransferase 0.47 5
Pseudomonas fluorescens SBW25 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.70 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.70 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.35 26
Marinobacter adhaerens HP15 0.74 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) 0.51 HP15_1298 phosphoribosylglycinamide formyltransferase — —
Shewanella loihica PV-4 0.71 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) 0.51 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.71 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) 0.51 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.52 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.71 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) 0.53 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.70 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] 0.52 MIT1002_02220 Phosphoribosylglycinamide formyltransferase low > 70
Agrobacterium fabrum C58 0.45 Atu0035 phosphoenolpyruvate carboxykinase 0.37 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 0.41 69
Pontibacter actiniarum KMM 6156, DSM 19842 0.44 CA264_05270 phosphoenolpyruvate carboxykinase (ATP) 0.26 CA264_18635 phosphoribosylglycinamide formyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.44 Echvi_2957 phosphoenolpyruvate carboxykinase (ATP) 0.25 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Sinorhizobium meliloti 1021 0.43 SMc02562 phosphoenolpyruvate carboxykinase 0.43 SMc00614 phosphoribosylglycinamide formyltransferase 0.35 103
Rhodopseudomonas palustris CGA009 0.43 TX73_001865 phosphoenolpyruvate carboxykinase 0.36 TX73_015790 phosphoribosylglycinamide formyltransferase — —
Rhizobium sp. OAE497 0.43 ABIE40_RS19415 phosphoenolpyruvate carboxykinase 0.43 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase low > 107
Sphingomonas koreensis DSMZ 15582 0.43 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) 0.32 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 68
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS23490 phosphoenolpyruvate carboxykinase (ATP) 0.25 CA265_RS02710 phosphoribosylglycinamide formyltransferase — —
Dinoroseobacter shibae DFL-12 0.42 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) 0.46 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) 0.59 23
Phaeobacter inhibens DSM 17395 0.41 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.44 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN 0.68 25
Pantoea sp. MT58 0.37 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) 0.55 IAI47_05175 phosphoribosylglycinamide formyltransferase low > 76
Escherichia coli ECOR38 0.36 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli Nissle 1917 0.36 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) 0.60 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase low > 52
Escherichia coli ECRC62 0.36 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) 0.60 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 73
Escherichia fergusonii Becca 0.36 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) 0.60 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Escherichia coli BW25113 0.36 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) 0.60 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) low > 76
Escherichia coli ECOR27 0.36 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase low > 57
Escherichia coli BL21 0.36 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] 0.60 ECD_02392 phosphoribosylglycinamide formyltransferase 1 low > 60
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.55 CSW01_11355 phosphoribosylglycinamide formyltransferase low > 62
Kangiella aquimarina DSM 16071 0.36 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) 0.50 B158DRAFT_2384 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent — —
Escherichia coli ECRC102 0.36 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC99 0.36 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC101 0.36 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase — —
Serratia liquefaciens MT49 0.36 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) 0.54 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.44 42
Escherichia coli ECRC101 0.36 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase — —
Escherichia coli ECRC98 0.36 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.60 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.60 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Enterobacter sp. TBS_079 0.36 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) 0.60 MPMX20_03355 Phosphoribosylglycinamide formyltransferase low > 85
Enterobacter asburiae PDN3 0.36 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) 0.58 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 76
Dickeya dianthicola ME23 0.36 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) 0.52 DZA65_RS06415 phosphoribosylglycinamide formyltransferase low > 75
Dickeya dianthicola 67-19 0.36 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) 0.52 HGI48_RS06065 phosphoribosylglycinamide formyltransferase low > 71
Erwinia tracheiphila SCR3 0.36 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) 0.51 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase low > 74
Rahnella sp. WP5 0.35 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) 0.53 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Klebsiella michiganensis M5al 0.35 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.59 BWI76_RS20970 phosphoribosylglycinamide formyltransferase low > 92
Dickeya dadantii 3937 0.35 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) 0.51 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase low > 74
Pectobacterium carotovorum WPP14 0.35 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) 0.50 HER17_RS15470 phosphoribosylglycinamide formyltransferase low > 75
Bacteroides thetaiotaomicron VPI-5482 0.34 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) 0.23 BT3360 phosphoribosylglycinamide formyltransferase (NCBI ptt file) — —
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) 0.22 HMPREF1058_RS10780 phosphoribosylglycinamide formyltransferase — —
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) 0.22 ABI39_RS06315 phosphoribosylglycinamide formyltransferase — —
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) 0.23 HMPREF1078_RS07090 phosphoribosylglycinamide formyltransferase — —
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP) 0.23 HMPREF1181_RS02435 phosphoribosylglycinamide formyltransferase — —
Bacteroides ovatus ATCC 8483 0.32 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP) 0.23 BACOVA_01954 putative phosphoribosylglycinamide formyltransferase — —

Not shown: 2 genomes with orthologs for Psest_3988 only; 37 genomes with orthologs for Psest_1473 only