Conservation of cofitness between GFF670 and GFF1358 in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 1.0 GFF670 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 1.0 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.63 7
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_02939 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.96 OHPLBJKB_04030 Methionine synthase low > 73
Escherichia coli BW25113 0.87 b0774 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase (NCBI) 0.96 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli ECRC62 0.87 BNILDI_21045 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 BNILDI_06140 metH methionine synthase — —
Escherichia coli ECOR27 0.87 NOLOHH_22775 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 NOLOHH_05380 metH methionine synthase low > 57
Escherichia coli ECRC99 0.86 KEDOAH_21505 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 KEDOAH_14920 metH methionine synthase — —
Escherichia coli ECRC101 0.86 OKFHMN_06405 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 OKFHMN_13240 metH methionine synthase — —
Escherichia coli BL21 0.86 ECD_00741 7,8-diaminopelargonic acid synthase, PLP-dependent 0.96 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 60
Escherichia coli ECRC101 0.86 MCAODC_25620 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 MCAODC_03740 metH methionine synthase — —
Escherichia coli ECRC102 0.86 NIAGMN_04450 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 NIAGMN_10990 metH methionine synthase — —
Escherichia fergusonii Becca 0.86 EFB2_03331 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.95 EFB2_04592 Methionine synthase low > 86
Escherichia coli ECOR38 0.86 HEPCGN_01635 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 HEPCGN_11885 metH methionine synthase low > 85
Escherichia coli ECRC98 0.86 JDDGAC_10040 bioA adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 JDDGAC_16865 metH methionine synthase — —
Escherichia coli Nissle 1917 0.86 ECOLIN_RS04125 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.96 ECOLIN_RS23160 methionine synthase low > 52
Klebsiella michiganensis M5al 0.85 BWI76_RS08755 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.95 BWI76_RS01685 methionine synthase low > 92
Enterobacter sp. TBS_079 0.85 MPMX20_01402 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.94 MPMX20_00235 Methionine synthase low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2217 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.95 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 76
Dickeya dadantii 3937 0.76 DDA3937_RS08505 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.86 DDA3937_RS19040 methionine synthase low > 74
Dickeya dianthicola 67-19 0.75 HGI48_RS08670 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.86 HGI48_RS19130 methionine synthase low > 71
Serratia liquefaciens MT49 0.75 IAI46_06520 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.86 IAI46_23155 methionine synthase low > 86
Dickeya dianthicola ME23 0.75 DZA65_RS08960 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.86 DZA65_RS20250 methionine synthase low > 75
Pectobacterium carotovorum WPP14 0.75 HER17_RS13465 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 HER17_RS02310 methionine synthase low > 75
Rahnella sp. WP5 0.74 EX31_RS23690 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 EX31_RS11760 methionine synthase low > 89
Pantoea sp. MT58 0.72 IAI47_13535 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.87 IAI47_17990 methionine synthase low > 76
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_05640 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA 0.76 CSW01_02060 methionine synthase low > 62
Parabacteroides merdae CL09T00C40 0.62 HMPREF1078_RS15295 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.49 HMPREF1078_RS14955 methionine synthase low > 61
Acinetobacter radioresistens SK82 0.57 MPMX26_02454 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.62 MPMX26_02351 Methionine synthase low > 36
Shewanella sp. ANA-3 0.57 Shewana3_2520 aminotransferase (RefSeq) 0.66 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) — —
Shewanella oneidensis MR-1 0.56 SO2741 bioA adenosylmethionine--8-amino-7-oxononanoate aminotransferase (NCBI ptt file) 0.65 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) — —
Shewanella loihica PV-4 0.55 Shew_1718 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.65 Shew_0710 metH B12-dependent methionine synthase (RefSeq) — —
Shewanella amazonensis SB2B 0.51 Sama_1437 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq) 0.66 Sama_0758 metH B12-dependent methionine synthase (RefSeq) — —
Mycobacterium tuberculosis H37Rv 0.47 Rv1568 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase BioA 0.21 Rv2124c 5-methyltetrahydrofolate--homocystein methyltransferase MetH (methionine synthase, vitamin-B12 dependent isozyme) (ms) low > 58
Castellaniella sp019104865 MT123 0.41 ABCV34_RS15300 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.57 ABCV34_RS14560 methionine synthase low > 48
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS07530 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.60 CA265_RS23440 methionine synthase low > 88
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2377 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.66 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.44 75
Pseudomonas sp. RS175 0.34 PFR28_04208 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.66 PFR28_01369 Methionine synthase 0.30 54
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_13570 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.66 AO356_00545 methionine synthase low > 104
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.65 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.65 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_08045 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.66 AO353_21615 methionine synthase low > 101
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_4631 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.66 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.35 87
Pseudomonas sp. S08-1 0.34 OH686_10850 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.66 OH686_03335 methionine synthase low > 80
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_1044 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) 0.66 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas putida KT2440 0.33 PP_4984 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.66 PP_2375 cobalamin-dependent methionine synthase 0.35 80
Marinobacter adhaerens HP15 0.33 HP15_2925 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.62 HP15_1792 B12-dependent methionine synthase low > 73
Pseudomonas simiae WCS417 0.33 PS417_26540 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.66 PS417_12310 methionine synthase low > 88
Pseudomonas fluorescens SBW25 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.66 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS28195 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.66 PFLU_RS13000 methionine synthase 0.45 18
Pseudomonas stutzeri RCH2 0.33 Psest_0306 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.66 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_0179 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.65 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_02410 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.60 CA264_16785 methionine synthase low > 74
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_0031 bioA aminotransferase 0.24 Synpcc7942_1372 metH methionine synthase (B12-dependent) — —
Magnetospirillum magneticum AMB-1 0.31 AMB_RS13895 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.22 AMB_RS02225 methionine synthase — —
Rhodopseudomonas palustris CGA009 0.31 TX73_015405 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.60 TX73_019180 methionine synthase low > 86
Agrobacterium fabrum C58 0.30 Atu4000 adenosylmethionine-8-amino-7-oxononanoate aminotransferase 0.60 Atu2155 methionine synthase 0.51 73
Rhizobium sp. OAE497 0.30 ABIE40_RS21060 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.61 ABIE40_RS12135 methionine synthase low > 107
Fusobacterium nucleatum SB010 0.29 HUW76_05105 adenosylmethionine--8-amino-7-oxononanoate transaminase 0.28 HUW76_02290 homocysteine S-methyltransferase family protein low > 35
Dechlorosoma suillum PS 0.28 Dsui_2880 adenosylmethionine-8-amino-7-oxononanoate transaminase 0.62 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase — —
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS12250 adenosylmethionine--8-amino-7-oxononanoate aminotransferase 0.61 HSERO_RS21740 methionine synthase low > 78
Azospirillum sp. SherDot2 0.20 MPMX19_02440 Putrescine--pyruvate aminotransferase 0.22 MPMX19_00637 Methionine synthase — —
Rhodospirillum rubrum S1H 0.19 Rru_A1254 Aminotransferase class-III (NCBI) 0.21 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) — —

Not shown: 35 genomes with orthologs for GFF670 only; 2 genomes with orthologs for GFF1358 only