Conservation of cofitness between Psest_2594 and Psest_1284 in Pseudomonas stutzeri RCH2

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_2594 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 1.0 Psest_1284 exodeoxyribonuclease VII, large subunit 0.21 15
Pseudomonas sp. S08-1 0.72 OH686_04500 Oxidoreductase, short-chain dehydrogenase/reductase family 0.81 OH686_17580 exodeoxyribonuclease VII, large subunit 0.38 54
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS08965 sugar dehydrogenase 0.35 HSERO_RS05850 exodeoxyribonuclease VII large subunit low > 78
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2151 Short chain dehydrogenase 0.29 Ac3H11_2382 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.65 GFF1818 Short chain dehydrogenase 0.36 GFF4511 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 90
Pseudomonas simiae WCS417 0.64 PS417_12765 oxidoreductase 0.82 PS417_23095 exodeoxyribonuclease low > 88
Pseudomonas fluorescens SBW25 0.63 PFLU_RS13450 SDR family oxidoreductase 0.82 PFLU_RS24755 exodeoxyribonuclease VII large subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS13450 SDR family oxidoreductase 0.82 PFLU_RS24755 exodeoxyribonuclease VII large subunit low > 109
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_4671 Short-chain dehydrogenase/reductase SDR 0.81 Pf1N1B4_844 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 87
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_22915 oxidoreductase 0.81 AO353_15935 exodeoxyribonuclease low > 101
Variovorax sp. OAS795 0.63 ABID97_RS00750 SDR family oxidoreductase 0.31 ABID97_RS16945 exodeoxyribonuclease VII large subunit low > 91
Variovorax sp. SCN45 0.63 GFF3615 Oxidoreductase, short-chain dehydrogenase/reductase family 0.31 GFF349 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 127
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_15470 NAD(P)-dependent oxidoreductase 0.42 CSW01_03975 exodeoxyribonuclease VII large subunit low > 62
Lysobacter sp. OAE881 0.63 ABIE51_RS01825 SDR family oxidoreductase 0.44 ABIE51_RS13750 exodeoxyribonuclease VII large subunit low > 62
Enterobacter sp. TBS_079 0.63 MPMX20_03761 putative oxidoreductase YgfF 0.41 MPMX20_03383 Exodeoxyribonuclease 7 large subunit low > 85
Pseudomonas sp. RS175 0.62 PFR28_01311 putative oxidoreductase YgfF 0.82 PFR28_00307 Exodeoxyribonuclease 7 large subunit low > 88
Dechlorosoma suillum PS 0.62 Dsui_3259 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 0.40 Dsui_3268 exodeoxyribonuclease VII, large subunit low > 51
Enterobacter asburiae PDN3 0.62 EX28DRAFT_2954 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 0.42 EX28DRAFT_0138 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 76
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_01285 oxidoreductase 0.84 AO356_06540 exodeoxyribonuclease low > 104
Rahnella sp. WP5 0.61 EX31_RS21525 SDR family oxidoreductase 0.40 EX31_RS20455 exodeoxyribonuclease VII large subunit low > 89
Pectobacterium carotovorum WPP14 0.61 HER17_RS04180 SDR family oxidoreductase 0.39 HER17_RS06150 exodeoxyribonuclease VII large subunit low > 75
Klebsiella michiganensis M5al 0.60 BWI76_RS23865 NAD(P)-dependent oxidoreductase 0.42 BWI76_RS21035 exodeoxyribonuclease VII large subunit low > 92
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2128 Short-chain dehydrogenase/reductase SDR 0.83 Pf6N2E2_3168 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 103
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_2487 Short-chain dehydrogenase/reductase SDR 0.81 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_2487 Short-chain dehydrogenase/reductase SDR 0.81 Psyr_1259 Exodeoxyribonuclease VII large subunit low > 86
Serratia liquefaciens MT49 0.60 IAI46_20810 SDR family oxidoreductase 0.39 IAI46_19215 exodeoxyribonuclease VII large subunit low > 86
Escherichia coli ECRC62 0.60 BNILDI_09985 ygfF SDR family oxidoreductase 0.40 BNILDI_12205 xseA exodeoxyribonuclease VII large subunit
Escherichia coli BW25113 0.60 b2902 ygfF predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain (NCBI) 0.40 b2509 xseA exodeoxyribonuclease VII large subunit (NCBI) low > 76
Pantoea sp. MT58 0.59 IAI47_03780 SDR family oxidoreductase 0.39 IAI47_05100 exodeoxyribonuclease VII large subunit low > 76
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_3262 Short-chain dehydrogenase/reductase SDR 0.81 PfGW456L13_4851 Exodeoxyribonuclease VII large subunit (EC 3.1.11.6) low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_00813 putative oxidoreductase YgfF 0.40 OHPLBJKB_01200 Exodeoxyribonuclease 7 large subunit low > 73
Escherichia coli ECOR27 0.59 NOLOHH_11450 ygfF SDR family oxidoreductase 0.40 NOLOHH_13405 xseA exodeoxyribonuclease VII large subunit low > 57
Escherichia coli BL21 0.59 ECD_02734 putative NAD(P)-dependent oxidoreductase 0.40 ECD_02401 exonuclease VII, large subunit low > 60
Dickeya dianthicola ME23 0.59 DZA65_RS07460 SDR family oxidoreductase 0.39 DZA65_RS16615 exodeoxyribonuclease VII large subunit low > 75
Dickeya dianthicola 67-19 0.59 HGI48_RS06980 SDR family oxidoreductase 0.39 HGI48_RS15540 exodeoxyribonuclease VII large subunit low > 71
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_04541 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family 0.35 H281DRAFT_04109 Exodeoxyribonuclease VII large subunit low > 103
Rhizobium sp. OAE497 0.57 ABIE40_RS17965 SDR family oxidoreductase 0.26 ABIE40_RS01205 exodeoxyribonuclease VII large subunit low > 107
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS06495 glucose-1-dehydrogenase 0.34 BPHYT_RS15865 exodeoxyribonuclease VII large subunit low > 109
Paraburkholderia graminis OAS925 0.57 ABIE53_001564 NAD(P)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) 0.34 ABIE53_003344 exodeoxyribonuclease VII large subunit low > 113
Azospirillum sp. SherDot2 0.56 MPMX19_06233 putative oxidoreductase YgfF 0.27 MPMX19_01631 Exodeoxyribonuclease 7 large subunit low > 112
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS24295 SDR family oxidoreductase 0.35 QEN71_RS02835 exodeoxyribonuclease VII large subunit low > 153
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS04935 glucose-1-dehydrogenase 0.33 RALBFv3_RS05060 exodeoxyribonuclease VII large subunit low > 76
Ralstonia solanacearum UW163 0.54 UW163_RS08690 glucose-1-dehydrogenase 0.33 UW163_RS08565 exodeoxyribonuclease VII large subunit
Ralstonia solanacearum PSI07 0.53 RPSI07_RS12355 KR domain-containing protein 0.33 RPSI07_RS12235 exodeoxyribonuclease VII large subunit low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS12555 KR domain-containing protein 0.34 RS_RS12670 exodeoxyribonuclease VII large subunit low > 80
Sinorhizobium meliloti 1021 0.52 SMc02486 oxidoreductase 0.28 SMc00378 exodeoxyribonuclease VII large subunit low > 103
Rhodopseudomonas palustris CGA009 0.52 TX73_000965 SDR family oxidoreductase 0.26 TX73_005960 exodeoxyribonuclease VII large subunit low > 86
Dinoroseobacter shibae DFL-12 0.51 Dshi_1222 short-chain dehydrogenase/reductase SDR (RefSeq) 0.25 Dshi_2727 exodeoxyribonuclease VII, large subunit (RefSeq)
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS00555 SDR family oxidoreductase 0.33 ABZR87_RS00710 exodeoxyribonuclease VII large subunit low > 80
Bosea sp. OAE506 0.39 ABIE41_RS19215 SDR family oxidoreductase 0.28 ABIE41_RS23155 exodeoxyribonuclease VII large subunit low > 77
Agrobacterium fabrum C58 0.33 Atu4877 short-chain dehydrogenase 0.25 Atu0269 exodeoxyribonuclease VII large subunit low > 89
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_15400 short-chain dehydrogenase 0.16 CA264_02365 exodeoxyribonuclease VII large subunit low > 74
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS21865 3-ketoacyl-ACP reductase 0.35 RR42_RS03475 exodeoxyribonuclease VII large subunit low > 128
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00075 glucose 1-dehydrogenase 0.45 ABZR86_RS06815 exodeoxyribonuclease VII large subunit low > 74

Not shown: 2 genomes with orthologs for Psest_2594 only; 45 genomes with orthologs for Psest_1284 only