Conservation of cofitness between ECD_00381 and ECD_02740 in Escherichia coli BL21

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00381 cytochrome o ubiquinol oxidase subunit III 1.0 ECD_02740 proline aminopeptidase P II 0.72 8
Escherichia coli ECRC62 1.00 BNILDI_22720 cyoC cytochrome o ubiquinol oxidase subunit III 1.00 BNILDI_09950 pepP Xaa-Pro aminopeptidase low > 75
Escherichia coli ECOR27 1.00 NOLOHH_01305 cyoC cytochrome o ubiquinol oxidase subunit III 1.00 NOLOHH_11415 pepP Xaa-Pro aminopeptidase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03243 Cytochrome bo(3) ubiquinol oxidase subunit 3 1.00 OHPLBJKB_00807 Xaa-Pro aminopeptidase low > 73
Escherichia coli BW25113 1.00 b0430 cyoC cytochrome o ubiquinol oxidase subunit III (NCBI) 0.99 b2908 pepP proline aminopeptidase P II (NCBI) 0.53 26
Escherichia coli ECOR38 1.00 HEPCGN_06985 cyoC cytochrome o ubiquinol oxidase subunit III 0.99 HEPCGN_18795 pepP Xaa-Pro aminopeptidase low > 87
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02585 cytochrome o ubiquinol oxidase subunit III 0.99 ECOLIN_RS16190 Xaa-Pro aminopeptidase low > 55
Escherichia coli ECRC101 1.00 MCAODC_27595 cyoC cytochrome o ubiquinol oxidase subunit III 1.00 MCAODC_10025 pepP Xaa-Pro aminopeptidase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_12025 cyoC cytochrome o ubiquinol oxidase subunit III 1.00 JDDGAC_23145 pepP Xaa-Pro aminopeptidase low > 86
Escherichia coli ECRC99 1.00 KEDOAH_19595 cyoC cytochrome o ubiquinol oxidase subunit III 1.00 KEDOAH_08635 pepP Xaa-Pro aminopeptidase
Escherichia coli ECRC102 1.00 NIAGMN_06425 cyoC cytochrome o ubiquinol oxidase subunit III 1.00 NIAGMN_17270 pepP Xaa-Pro aminopeptidase
Escherichia coli ECRC100 1.00 OKFHMN_08370 cyoC cytochrome o ubiquinol oxidase subunit III 1.00 OKFHMN_19505 pepP Xaa-Pro aminopeptidase low > 80
Escherichia fergusonii Becca 1.00 EFB2_03627 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.99 EFB2_00994 Xaa-Pro aminopeptidase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF4344 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.93 GFF3009 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.70 25
Klebsiella michiganensis M5al 0.92 BWI76_RS06485 cytochrome o ubiquinol oxidase subunit III 0.87 BWI76_RS23895 Xaa-Pro aminopeptidase 0.23 73
Enterobacter asburiae PDN3 0.86 EX28DRAFT_2541 cytochrome o ubiquinol oxidase, subunit III 0.89 EX28DRAFT_2960 Xaa-Pro aminopeptidase low > 76
Dickeya dianthicola ME23 0.82 DZA65_RS05975 cytochrome o ubiquinol oxidase subunit III 0.78 DZA65_RS02455 Xaa-Pro aminopeptidase low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS05605 cytochrome o ubiquinol oxidase subunit III 0.78 DDA3937_RS02395 Xaa-Pro aminopeptidase
Dickeya dianthicola 67-19 0.81 HGI48_RS05650 cytochrome o ubiquinol oxidase subunit III 0.78 HGI48_RS02350 Xaa-Pro aminopeptidase low > 71
Pantoea sp. MT58 0.81 IAI47_14690 cytochrome o ubiquinol oxidase subunit III 0.77 IAI47_03750 Xaa-Pro aminopeptidase low > 76
Pectobacterium carotovorum WPP14 0.81 HER17_RS15885 cytochrome o ubiquinol oxidase subunit III 0.78 HER17_RS19115 Xaa-Pro aminopeptidase low > 75
Rahnella sp. WP5 0.80 EX31_RS22210 cytochrome o ubiquinol oxidase subunit III 0.80 EX31_RS21495 Xaa-Pro aminopeptidase low > 89
Serratia liquefaciens MT49 0.79 IAI46_04975 cytochrome o ubiquinol oxidase subunit III 0.79 IAI46_20875 Xaa-Pro aminopeptidase low > 86
Erwinia tracheiphila SCR3 0.79 LU632_RS18385 cytochrome o ubiquinol oxidase subunit III 0.79 LU632_RS05880 pepP Xaa-Pro aminopeptidase
Enterobacter sp. TBS_079 0.79 MPMX20_01021 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.90 MPMX20_03767 Xaa-Pro aminopeptidase low > 85
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 0.44 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_1143 cytochrome bo3 quinol oxidase subunit 3 0.44 Psyr_0321 aminopeptidase P, Metallo peptidase, MEROPS family M24B
Pseudomonas fluorescens FW300-N1B4 0.68 Pf1N1B4_971 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.44 Pf1N1B4_2229 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.44 45
Pseudomonas sp. RS175 0.67 PFR28_00244 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.44 PFR28_04321 Xaa-Pro aminopeptidase low > 88
Pseudomonas simiae WCS417 0.67 PS417_23380 cytochrome o ubiquinol oxidase subunit III 0.43 PS417_27285 Xaa-Pro aminopeptidase low > 88
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_16970 cytochrome o ubiquinol oxidase subunit III 0.43 AO356_13010 Xaa-Pro aminopeptidase low > 104
Pseudomonas fluorescens SBW25 0.67 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.43 PFLU_RS28945 Xaa-Pro aminopeptidase 0.60 83
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS25210 cytochrome o ubiquinol oxidase subunit III 0.43 PFLU_RS28945 Xaa-Pro aminopeptidase low > 109
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5319 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.43 Pf6N2E2_4480 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 103
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4934 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.43 PfGW456L13_896 Xaa-Pro aminopeptidase (EC 3.4.11.9) 0.73 6
Pseudomonas fluorescens FW300-N2E3 0.66 AO353_15460 cytochrome o ubiquinol oxidase subunit III 0.44 AO353_08760 Xaa-Pro aminopeptidase 0.69 5
Pseudomonas putida KT2440 0.63 PP_0814 cytochrome bo terminal oxidase subunit III 0.44 PP_5200 proline aminopeptidase P II
Ralstonia solanacearum UW163 0.62 UW163_RS06975 cytochrome o ubiquinol oxidase subunit III 0.39 UW163_RS01875 Xaa-Pro aminopeptidase
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS06650 cytochrome o ubiquinol oxidase subunit III 0.39 RALBFv3_RS11710 Xaa-Pro aminopeptidase
Ralstonia solanacearum PSI07 0.62 RPSI07_RS10575 cytochrome o ubiquinol oxidase subunit III 0.40 RPSI07_RS21505 Xaa-Pro aminopeptidase
Ralstonia solanacearum GMI1000 0.62 RS_RS14600 cytochrome o ubiquinol oxidase subunit III 0.40 RS_RS02535 Xaa-Pro aminopeptidase
Alteromonas macleodii MIT1002 0.61 MIT1002_03927 Cytochrome o ubiquinol oxidase subunit 3 0.48 MIT1002_02984 Xaa-Pro aminopeptidase low > 70
Cupriavidus basilensis FW507-4G11 0.60 RR42_RS32590 cytochrome o ubiquinol oxidase subunit III 0.42 RR42_RS02745 Xaa-Pro aminopeptidase low > 128
Shewanella loihica PV-4 0.60 Shew_0368 cytochrome c oxidase, subunit III (RefSeq) 0.32 Shew_2358 peptidase M24 (RefSeq) low > 60
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS02325 cytochrome o ubiquinol oxidase subunit III 0.41 ABZR87_RS07665 aminopeptidase P N-terminal domain-containing protein low > 80
Variovorax sp. OAS795 0.59 ABID97_RS07630 cytochrome o ubiquinol oxidase subunit III 0.37 ABID97_RS02460 aminopeptidase P N-terminal domain-containing protein low > 91
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS36890 cytochrome o ubiquinol oxidase subunit III 0.39 QEN71_RS26760 aminopeptidase P N-terminal domain-containing protein low > 153
Variovorax sp. SCN45 0.58 GFF5676 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.36 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 127
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS12310 cytochrome O ubiquinol oxidase 0.42 HSERO_RS03510 proline aminopeptidase P II
Acinetobacter radioresistens SK82 0.56 MPMX26_01160 Cytochrome bo(3) ubiquinol oxidase subunit 3 0.43 MPMX26_02286 Xaa-Pro aminopeptidase low > 36
Dyella japonica UNC79MFTsu3.2 0.55 ABZR86_RS07615 cytochrome o ubiquinol oxidase subunit III 0.36 ABZR86_RS11970 aminopeptidase P N-terminal domain-containing protein low > 74
Paraburkholderia graminis OAS925 0.55 ABIE53_005342 cytochrome o ubiquinol oxidase subunit 3 0.41 ABIE53_003487 Xaa-Pro aminopeptidase low > 113
Xanthomonas campestris pv. campestris strain 8004 0.55 Xcc-8004.3815.1 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.37 Xcc-8004.1147.1 Xaa-Pro aminopeptidase (EC 3.4.11.9) low > 74
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS24925 cytochrome O ubiquinol oxidase 0.42 BPHYT_RS16575 Xaa-Pro aminopeptidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_03428 cytochrome bo3 quinol oxidase subunit 3 (EC 1.10.3.-) 0.41 H281DRAFT_04247 aminopeptidase P Metallo peptidase. MEROPS family M24B low > 103
Lysobacter sp. OAE881 0.53 ABIE51_RS09775 cytochrome o ubiquinol oxidase subunit III 0.37 ABIE51_RS17320 aminopeptidase P N-terminal domain-containing protein low > 62
Acidovorax sp. GW101-3H11 0.53 Ac3H11_3143 Cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-) 0.37 Ac3H11_652 Xaa-Pro aminopeptidase (EC 3.4.11.9)
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2604 ctaE cytochrome c oxidase subunit III 0.35 Synpcc7942_0075 pepP aminopeptidase P. Metallo peptidase. MEROPS family M24B low > 38
Mucilaginibacter yixingensis YX-36 DSM 26809 0.19 ABZR88_RS03680 cytochrome c oxidase subunit 3 0.26 ABZR88_RS17305 aminopeptidase P N-terminal domain-containing protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_2107 Heme/copper-type cytochrome/quinol oxidase, subunit 3 0.29 Echvi_1306 Xaa-Pro aminopeptidase
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_01335 cytochrome oxidase subunit III 0.31 CA264_20445 peptidase M24 family protein
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS17795 cytochrome oxidase subunit III 0.26 CA265_RS22815 X-Pro aminopeptidase
Dechlorosoma suillum PS 0.16 Dsui_3114 heme/copper-type cytochrome/quinol oxidase, subunit 3 0.39 Dsui_1591 Xaa-Pro aminopeptidase low > 51

Not shown: 14 genomes with orthologs for ECD_00381 only; 17 genomes with orthologs for ECD_02740 only