Conservation of cofitness between ECD_03509 and ECD_01914 in Escherichia coli BL21

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03509 ATP-dependent DNA helicase 1.0 ECD_01914 exodeoxyribonuclease I; exonuclease I 0.80 9
Escherichia coli BW25113 1.00 b3652 recG ATP-dependent DNA helicase (NCBI) 0.99 b2011 sbcB exonuclease I (NCBI) 0.31 62
Escherichia coli ECRC62 1.00 BNILDI_04090 recG ATP-dependent DNA helicase RecG 0.99 BNILDI_14790 sbcB exodeoxyribonuclease I — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 0.99 OHPLBJKB_01689 Exodeoxyribonuclease I low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.99 ECOLIN_RS11910 exodeoxyribonuclease I low > 52
Escherichia fergusonii Becca 0.99 EFB2_00136 ATP-dependent DNA helicase RecG 0.99 EFB2_01845 Exodeoxyribonuclease I low > 86
Escherichia coli ECOR27 0.99 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 0.99 NOLOHH_15890 sbcB exodeoxyribonuclease I low > 57
Escherichia coli ECRC102 0.99 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 0.99 NIAGMN_22510 sbcB exodeoxyribonuclease I — —
Escherichia coli ECRC101 0.99 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.99 MCAODC_20375 sbcB exodeoxyribonuclease I — —
Escherichia coli ECRC99 0.99 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 0.98 KEDOAH_03585 sbcB exodeoxyribonuclease I — —
Escherichia coli ECRC101 0.99 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 0.98 OKFHMN_24565 sbcB exodeoxyribonuclease I — —
Escherichia coli ECOR38 0.99 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 1.00 HEPCGN_03270 sbcB exodeoxyribonuclease I low > 85
Escherichia coli ECRC98 0.99 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 0.98 JDDGAC_28675 sbcB exodeoxyribonuclease I — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.93 GFF3917 Exodeoxyribonuclease I (EC 3.1.11.1) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.87 EX28DRAFT_0545 Exodeoxyribonuclease I subunit C (EC 3.1.11.1) low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_00084 ATP-dependent DNA helicase RecG 0.87 MPMX20_02997 Exodeoxyribonuclease I low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS27440 DNA helicase RecG 0.87 BWI76_RS18785 exodeoxyribonuclease I low > 92
Pantoea sp. MT58 0.84 IAI47_00500 ATP-dependent DNA helicase RecG 0.76 IAI47_07165 exodeoxyribonuclease I low > 76
Serratia liquefaciens MT49 0.84 IAI46_24905 ATP-dependent DNA helicase RecG 0.72 IAI46_17150 exodeoxyribonuclease I low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS21395 ATP-dependent DNA helicase RecG 0.72 HER17_RS12135 exodeoxyribonuclease I low > 75
Erwinia tracheiphila SCR3 0.82 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.76 LU632_RS15835 sbcB exodeoxyribonuclease I low > 74
Dickeya dadantii 3937 0.80 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.71 DDA3937_RS09820 exodeoxyribonuclease I low > 74
Rahnella sp. WP5 0.80 EX31_RS15820 ATP-dependent DNA helicase RecG 0.72 EX31_RS17885 exodeoxyribonuclease I low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.72 HGI48_RS09830 exodeoxyribonuclease I — —
Dickeya dianthicola ME23 0.80 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.71 DZA65_RS10155 exodeoxyribonuclease I low > 75
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13680 DNA helicase RecG 0.58 CSW01_06240 exodeoxyribonuclease I low > 62
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.51 Sama_1973 sbcB exonuclease I (RefSeq) 0.58 2
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.50 Shewana3_2572 sbcB exonuclease I (RefSeq) 0.53 10
Shewanella loihica PV-4 0.64 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.51 Shew_1611 sbcB exonuclease I (RefSeq) 0.53 36
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.49 SO2790 sbcB exodeoxyribonuclease I (NCBI ptt file) 0.50 24
Alteromonas macleodii MIT1002 0.62 MIT1002_00111 ATP-dependent DNA helicase RecG 0.45 MIT1002_01676 Exodeoxyribonuclease I low > 70
Pseudomonas stutzeri RCH2 0.55 Psest_4192 ATP-dependent DNA helicase RecG 0.41 Psest_3180 Exonuclease I — —
Pseudomonas putida KT2440 0.55 PP_5310 junction-specific ATP-dependent DNA helicase 0.42 PP_1365 exodeoxyribonuclease I — —
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.42 PfGW456L13_1823 Exodeoxyribonuclease I (EC 3.1.11.1) low > 87
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.42 Pf1N1B4_668 Exodeoxyribonuclease I (EC 3.1.11.1) low > 87
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.42 PS417_22575 exonuclease I low > 88
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.42 AO353_03720 exonuclease I 0.55 7
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.42 PFLU_RS24210 exodeoxyribonuclease I low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.42 PFLU_RS24210 exodeoxyribonuclease I 0.42 12
Marinobacter adhaerens HP15 0.54 HP15_309 DNA helicase, ATP-dependent, RecG 0.45 HP15_2375 exonuclease I — —
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.41 Pf6N2E2_5506 Exodeoxyribonuclease I (EC 3.1.11.1) 0.29 77
Pseudomonas sp. S08-1 0.54 OH686_13505 ATP-dependent DNA helicase RecG 0.43 OH686_18285 Exodeoxyribonuclease I low > 80
Pseudomonas sp. RS175 0.54 PFR28_04435 ATP-dependent DNA helicase RecG 0.41 PFR28_03441 Exodeoxyribonuclease I low > 88
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_12380 ATP-dependent DNA helicase RecG 0.41 AO356_17885 exonuclease I low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.40 Psyr_4020 Exodeoxyribonuclease I subunit C 0.34 86
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.40 Psyr_4020 Exodeoxyribonuclease I subunit C low > 86
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.37 ABIE51_RS12700 exodeoxyribonuclease I low > 62
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.39 ABZR86_RS01905 exodeoxyribonuclease I low > 74
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.39 LRK55_RS17685 exodeoxyribonuclease I 0.69 31
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.39 OKGIIK_07470 sbcB exodeoxyribonuclease I low > 52
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.39 LRK54_RS17465 exodeoxyribonuclease I low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.38 Xcc-8004.3329.1 Exodeoxyribonuclease I (EC 3.1.11.1) low > 74
Ralstonia solanacearum GMI1000 0.45 RS_RS13565 DNA helicase RecG 0.41 RS_RS15700 exodeoxyribonuclease I — —
Ralstonia solanacearum UW163 0.44 UW163_RS07950 DNA helicase RecG 0.41 UW163_RS05825 exodeoxyribonuclease I — —
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS05675 DNA helicase RecG 0.42 RALBFv3_RS07800 exodeoxyribonuclease I 0.33 40
Ralstonia solanacearum PSI07 0.44 RPSI07_RS11625 DNA helicase RecG 0.41 RPSI07_RS09480 exodeoxyribonuclease I — —
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS01270 ATP-dependent DNA helicase RecG 0.41 ABZR87_RS03495 exodeoxyribonuclease I low > 80
Acidovorax sp. GW101-3H11 0.44 Ac3H11_781 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.40 Ac3H11_2454 Exodeoxyribonuclease I (EC 3.1.11.1) low > 79
Variovorax sp. OAS795 0.40 ABID97_RS01575 ATP-dependent DNA helicase RecG 0.41 ABID97_RS16900 exodeoxyribonuclease I 0.43 66
Variovorax sp. SCN45 0.38 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.41 GFF339 Exodeoxyribonuclease I (EC 3.1.11.1) low > 127

Not shown: 38 genomes with orthologs for ECD_03509 only; 0 genomes with orthologs for ECD_01914 only