Conservation of cofitness between ECD_00132 and ECD_01798 in Escherichia coli BL21

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00132 pantothenate synthetase 1.0 ECD_01798 KDG regulon transcriptional repressor 0.35 53
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03528 Pantothenate synthetase 1.00 OHPLBJKB_01904 Transcriptional regulator KdgR low > 73
Escherichia coli BW25113 1.00 b0133 panC pantoate--beta-alanine ligase (NCBI) 1.00 b1827 kdgR predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_08920 panC pantoate--beta-alanine ligase 1.00 BNILDI_15785 kdgR DNA-binding transcriptional regulator KdgR low > 75
Escherichia coli ECRC98 0.99 JDDGAC_14000 panC pantoate--beta-alanine ligase 1.00 JDDGAC_01055 kdgR DNA-binding transcriptional regulator KdgR low > 86
Escherichia coli ECRC100 0.99 OKFHMN_10405 panC pantoate--beta-alanine ligase 1.00 OKFHMN_26480 kdgR DNA-binding transcriptional regulator KdgR low > 80
Escherichia coli ECRC101 0.99 MCAODC_00920 panC pantoate--beta-alanine ligase 1.00 MCAODC_18925 kdgR DNA-binding transcriptional regulator KdgR low > 87
Escherichia coli ECRC99 0.99 KEDOAH_17750 panC pantoate--beta-alanine ligase 1.00 KEDOAH_01625 kdgR DNA-binding transcriptional regulator KdgR
Escherichia coli ECRC102 0.99 NIAGMN_08255 panC pantoate--beta-alanine ligase 1.00 NIAGMN_01580 kdgR DNA-binding transcriptional regulator KdgR
Escherichia fergusonii Becca 0.99 EFB2_03911 Pantothenate synthetase 1.00 EFB2_02174 Transcriptional regulator KdgR low > 86
Escherichia coli ECOR38 0.98 HEPCGN_08380 panC pantoate--beta-alanine ligase 1.00 HEPCGN_04880 kdgR DNA-binding transcriptional regulator KdgR low > 87
Klebsiella michiganensis M5al 0.89 BWI76_RS04990 pantoate--beta-alanine ligase 0.95 BWI76_RS17960 DNA-binding transcriptional regulator KdgR
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF92 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.96 GFF2842 Transcriptional regulator KdgR, KDG operon repressor low > 78
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3729 pantoate--beta-alanine ligase 0.95 EX28DRAFT_0729 transcriptional regulator, IclR family low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_00826 Pantothenate synthetase 0.95 MPMX20_02734 Transcriptional regulator KdgR low > 85
Serratia liquefaciens MT49 0.76 IAI46_21245 pantoate--beta-alanine ligase 0.82 IAI46_10820 DNA-binding transcriptional regulator KdgR low > 86
Pectobacterium carotovorum WPP14 0.74 HER17_RS05555 pantoate--beta-alanine ligase 0.89 HER17_RS11535 DNA-binding transcriptional regulator KdgR low > 75
Pantoea sp. MT58 0.73 IAI47_15660 pantoate--beta-alanine ligase 0.85 IAI47_08720 DNA-binding transcriptional regulator KdgR low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS20105 panC pantoate--beta-alanine ligase 0.80 LU632_RS13230 kdgR DNA-binding transcriptional regulator KdgR low > 74
Rahnella sp. WP5 0.73 EX31_RS03285 pantoate--beta-alanine ligase 0.85 EX31_RS24895 DNA-binding transcriptional regulator KdgR low > 89
Dickeya dianthicola ME23 0.70 DZA65_RS17160 pantoate--beta-alanine ligase 0.90 DZA65_RS11830 DNA-binding transcriptional regulator KdgR low > 75
Dickeya dadantii 3937 0.68 DDA3937_RS15960 pantoate--beta-alanine ligase 0.90 DDA3937_RS11445 DNA-binding transcriptional regulator KdgR low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS16075 pantoate--beta-alanine ligase 0.90 HGI48_RS11490 DNA-binding transcriptional regulator KdgR low > 71
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0827 pantothenate synthetase 0.24 Psyr_4014 regulatory protein, IclR low > 86
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0827 pantothenate synthetase 0.24 Psyr_4014 regulatory protein, IclR low > 86
Pseudomonas sp. RS175 0.54 PFR28_03722 Pantothenate synthetase 0.25 PFR28_00618 Pca regulon regulatory protein
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.25 Pf6N2E2_2839 Pca regulon regulatory protein PcaR
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16055 pantoate--beta-alanine ligase 0.52 AO356_28560 transcriptional regulator
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.25 PfGW456L13_4594 Pca regulon regulatory protein PcaR low > 87
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.26 Pf1N1B4_3230 Pca regulon regulatory protein PcaR low > 87
Pseudomonas putida KT2440 0.53 PP_4700 pantothenate synthetase 0.24 PP_1375 transcription regulatory protein (pca regulon) low > 96
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_14380 pantoate--beta-alanine ligase 0.25 AO353_17185 IclR family transcriptional regulator low > 101
Pseudomonas stutzeri RCH2 0.52 Psest_0995 pantoate--beta-alanine ligase 0.19 Psest_3073 beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS25755 pantoate--beta-alanine ligase 0.26 PFLU_RS06715 IclR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS25755 pantoate--beta-alanine ligase 0.26 PFLU_RS06715 IclR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.50 PS417_23915 pantoate--beta-alanine ligase 0.25 PS417_06690 IclR family transcriptional regulator low > 88
Shewanella sp. ANA-3 0.47 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) 0.15 Shewana3_1275 IclR family transcriptional regulator (RefSeq)
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS15120 pantoate--beta-alanine ligase 0.21 LRK54_RS04475 helix-turn-helix domain-containing protein
Rhodanobacter denitrificans MT42 0.45 LRK55_RS14835 pantoate--beta-alanine ligase 0.21 LRK55_RS04250 IclR family transcriptional regulator C-terminal domain-containing protein low > 63
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_2453 pantoate--beta-alanine ligase 0.10 Ga0059261_1684 transcriptional regulator, IclR family
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS00820 pantoate--beta-alanine ligase 0.13 ABZR86_RS01165 IclR family transcriptional regulator
Acinetobacter radioresistens SK82 0.43 MPMX26_00546 Pantothenate synthetase 0.19 MPMX26_01897 hypothetical protein
Rhodopseudomonas palustris CGA009 0.43 TX73_016310 pantoate--beta-alanine ligase 0.26 TX73_024130 IclR family transcriptional regulator
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.3051.1 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.22 Xcc-8004.484.1 Pca regulon regulatory protein PcaR
Variovorax sp. OAS795 0.40 ABID97_RS07430 pantoate--beta-alanine ligase 0.21 ABID97_RS24205 IclR family transcriptional regulator C-terminal domain-containing protein low > 91
Variovorax sp. SCN45 0.40 GFF2578 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.25 GFF3166 Transcriptional regulator, IclR family low > 127
Agrobacterium fabrum C58 0.39 Atu3482 pantoate--beta-alanine ligase 0.26 Atu0706 transcriptional regulator, IclR family low > 89
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS15520 pantoate--beta-alanine ligase 0.22 HSERO_RS02910 IclR family transcriptional regulator
Phaeobacter inhibens DSM 17395 0.39 PGA1_c32040 pantothenate synthetase PanC 0.20 PGA1_c07430 putative transcriptional regulator, IclR family
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS14680 pantoate--beta-alanine ligase 0.21 HMPREF1078_RS01425 IclR family transcriptional regulator low > 61
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS00030 pantoate--beta-alanine ligase 0.63 ABZR87_RS20805 DNA-binding transcriptional regulator KdgR
Azospirillum sp. SherDot2 0.37 MPMX19_04465 Pantothenate synthetase 0.21 MPMX19_04439 Pca regulon regulatory protein low > 112
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00150 pantothenate synthetase 0.62 H281DRAFT_01160 transcriptional regulator, IclR family
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16055 pantothenate synthetase 0.27 RR42_RS34920 IclR family transcriptional regulator
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS04925 pantothenate synthetase 0.63 BPHYT_RS10950 transcriptional regulator
Paraburkholderia graminis OAS925 0.36 ABIE53_001260 pantoate--beta-alanine ligase 0.62 ABIE53_002286 IclR family KDG regulon transcriptional repressor
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS25065 pantoate--beta-alanine ligase 0.61 QEN71_RS37295 DNA-binding transcriptional regulator KdgR
Acidovorax sp. GW101-3H11 0.34 Ac3H11_3840 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.21 Ac3H11_3923 Transcriptional regulator, IclR family low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF1220 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.22 GFF2386 Pca regulon regulatory protein PcaR

Not shown: 39 genomes with orthologs for ECD_00132 only; 1 genomes with orthologs for ECD_01798 only