| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_03395 | | dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor | 1.0 | ECD_00746 | | exision nuclease of nucleotide excision repair, DNA damage recognition component | 0.48 | 19 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_03520 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | BNILDI_21020 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_08040 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | NOLOHH_22750 | uvrB | excinuclease ABC subunit UvrB | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00162 | | Periplasmic dipeptide transport protein | 1.00 | OHPLBJKB_02934 | | UvrABC system protein B | low | > 73 |
| Escherichia coli BW25113 | 1.00 | b3544 | dppA | dipeptide transporter (NCBI) | 1.00 | b0779 | uvrB | excinuclease ABC subunit B (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_12050 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | KEDOAH_21530 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_16100 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | OKFHMN_06380 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_06615 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | MCAODC_25595 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_19730 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | JDDGAC_10015 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_13860 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | NIAGMN_04425 | uvrB | excinuclease ABC subunit UvrB | — | — |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_14960 | dppA | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | HEPCGN_01660 | uvrB | excinuclease ABC subunit UvrB | low | > 85 |
| Escherichia fergusonii Becca | 1.00 | EFB2_00263 | | Periplasmic dipeptide transport protein | 1.00 | EFB2_03326 | | UvrABC system protein B | low | > 86 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS20280 | | dipeptide ABC transporter substrate-binding protein DppA | 1.00 | ECOLIN_RS04150 | | excinuclease ABC subunit UvrB | low | > 52 |
| Klebsiella michiganensis M5al | 0.93 | BWI76_RS26885 | | ABC transporter substrate-binding protein | 0.93 | BWI76_RS08785 | | excinuclease ABC subunit B | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.93 | GFF475 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.93 | GFF675 | | Excinuclease ABC subunit B | low | > 78 |
| Enterobacter asburiae PDN3 | 0.93 | EX28DRAFT_3804 | | ABC-type dipeptide transport system, periplasmic component | 0.94 | EX28DRAFT_2211 | | Excinuclease ABC subunit B | low | > 76 |
| Enterobacter sp. TBS_079 | 0.93 | MPMX20_00190 | | Periplasmic dipeptide transport protein | 0.94 | MPMX20_01408 | | UvrABC system protein B | low | > 85 |
| Serratia liquefaciens MT49 | 0.87 | IAI46_00475 | | ABC transporter substrate-binding protein | 0.88 | IAI46_06550 | | excinuclease ABC subunit B | low | > 86 |
| Rahnella sp. WP5 | 0.86 | EX31_RS05515 | | ABC transporter substrate-binding protein | 0.87 | EX31_RS23720 | | excinuclease ABC subunit B | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS00220 | | ABC transporter substrate-binding protein | 0.88 | HER17_RS13420 | | excinuclease ABC subunit B | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.84 | LU632_RS00265 | | ABC transporter substrate-binding protein | 0.90 | LU632_RS09160 | uvrB | excinuclease ABC subunit B | low | > 74 |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS00460 | | ABC transporter substrate-binding protein | 0.87 | DDA3937_RS08530 | | excinuclease ABC subunit B | low | > 74 |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS21920 | | ABC transporter substrate-binding protein | 0.87 | DZA65_RS08990 | | excinuclease ABC subunit B | low | > 75 |
| Dickeya dianthicola 67-19 | 0.83 | HGI48_RS20925 | | ABC transporter substrate-binding protein | 0.86 | HGI48_RS08695 | | excinuclease ABC subunit B | low | > 71 |
| Pantoea sp. MT58 | 0.82 | IAI47_18650 | | ABC transporter substrate-binding protein | 0.89 | IAI47_13505 | | excinuclease ABC subunit B | low | > 76 |
| Rhodospirillum rubrum S1H | 0.61 | Rru_A2356 | | extracellular solute-binding protein, family 5 (NCBI) | 0.59 | Rru_A1133 | | Excinuclease ABC, B subunit (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.61 | AZOBR_RS21760 | | peptide ABC transporter substrate-binding protein | 0.61 | AZOBR_RS16420 | | excinuclease ABC subunit B | low | > 97 |
| Azospirillum sp. SherDot2 | 0.59 | MPMX19_04419 | | Periplasmic dipeptide transport protein | 0.59 | MPMX19_01038 | | UvrABC system protein B | low | > 112 |
| Variovorax sp. SCN45 | 0.59 | GFF7288 | | Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) | 0.63 | GFF945 | | Excinuclease ABC subunit B | low | > 127 |
| Variovorax sp. OAS795 | 0.58 | ABID97_RS04470 | | ABC transporter substrate-binding protein | 0.64 | ABID97_RS13995 | | excinuclease ABC subunit UvrB | low | > 91 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_05802 | | dipeptide transport system substrate-binding protein | 0.65 | H281DRAFT_04973 | | Excinuclease ABC subunit B | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS18690 | | ABC transporter | 0.65 | BPHYT_RS06905 | | excinuclease ABC subunit B | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.54 | QEN71_RS28705 | | ABC transporter substrate-binding protein | 0.65 | QEN71_RS23870 | | excinuclease ABC subunit UvrB | low | > 153 |
| Pseudomonas putida KT2440 | 0.53 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | 0.70 | PP_1974 | | excinuclease UvrABC protein B | — | — |
| Pseudomonas sp. S08-1 | 0.53 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | 0.70 | OH686_04580 | | excinuclease ABC subunit B | low | > 80 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.53 | Psyr_4236 | | extracellular solute-binding protein, family 5 | 0.71 | Psyr_1974 | | Excinuclease ABC subunit B | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.53 | Psyr_4236 | | extracellular solute-binding protein, family 5 | 0.71 | Psyr_1974 | | Excinuclease ABC subunit B | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_07240 | | peptide ABC transporter substrate-binding protein | 0.71 | AO356_21335 | | excinuclease ABC subunit B | low | > 104 |
| Pseudomonas fluorescens FW300-N1B4 | 0.52 | Pf1N1B4_1120 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.71 | Pf1N1B4_26 | | Excinuclease ABC subunit B | low | > 87 |
| Pseudomonas sp. RS175 | 0.52 | PFR28_00131 | | Periplasmic dipeptide transport protein | 0.71 | PFR28_02837 | | UvrABC system protein B | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.52 | PfGW456L13_5051 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.70 | PfGW456L13_3959 | | Excinuclease ABC subunit B | low | > 87 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_04085 | | peptide ABC transporter substrate-binding protein | 0.70 | PS417_18685 | | excinuclease ABC subunit B | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.51 | PFLU_RS04115 | | ABC transporter substrate-binding protein | 0.70 | PFLU_RS20655 | | excinuclease ABC subunit B | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.51 | PFLU_RS04115 | | ABC transporter substrate-binding protein | 0.70 | PFLU_RS20655 | | excinuclease ABC subunit B | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_05370 | | peptide ABC transporter substrate-binding protein | 0.71 | AO353_20545 | | excinuclease ABC subunit B | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_3307 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.71 | Pf6N2E2_52 | | Excinuclease ABC subunit B | low | > 103 |
| Kangiella aquimarina DSM 16071 | 0.50 | B158DRAFT_1047 | | ABC-type dipeptide transport system, periplasmic component | 0.70 | B158DRAFT_2341 | | Excinuclease ABC subunit B | low | > 40 |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_003951 | | dipeptide transport system substrate-binding protein | 0.65 | ABIE53_001645 | | excinuclease ABC subunit B | low | > 113 |
| Shewanella sp. ANA-3 | 0.43 | Shewana3_2650 | | acetate kinase (RefSeq) | 0.74 | Shewana3_2166 | | excinuclease ABC subunit B (RefSeq) | — | — |
| Shewanella amazonensis SB2B | 0.43 | Sama_1235 | | peptide ABC transporter, periplasmic peptide-binding protein (RefSeq) | 0.74 | Sama_1828 | | excinuclease ABC subunit B (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.42 | SO1805 | sapA | peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) | 0.75 | SO2506 | uvrB | excinuclease ABC, B subunit (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.41 | Shew_2498 | | extracellular solute-binding protein (RefSeq) | 0.74 | Shew_2064 | | excinuclease ABC subunit B (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.40 | MIT1002_01141 | | Dipeptide-binding protein | 0.74 | MIT1002_01261 | | Excinuclease ABC subunit B | low | > 70 |
| Fusobacterium nucleatum SB010 | 0.21 | HUW76_05125 | | ABC transporter substrate-binding protein | 0.55 | HUW76_02625 | | excinuclease ABC subunit UvrB | low | > 35 |
| Cupriavidus basilensis FW507-4G11 | 0.16 | RR42_RS18210 | | ABC transporter substrate-binding protein | 0.66 | RR42_RS05995 | | excinuclease ABC subunit B | low | > 128 |
| Phaeobacter inhibens DSM 17395 | 0.16 | PGA1_262p00300 | | ABC transporter, extracellular solute-binding protein | 0.59 | PGA1_c26160 | | uvrABC system protein B | low | > 62 |
| Dechlorosoma suillum PS | 0.15 | Dsui_2238 | | ABC-type dipeptide transport system, periplasmic component | 0.67 | Dsui_2434 | | excinuclease ABC, B subunit | low | > 51 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.14 | CA265_RS01030 | | ABC transporter substrate-binding protein | 0.56 | CA265_RS19430 | | excinuclease ABC subunit B | low | > 88 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.14 | DVU2084 | appA | oligopeptide-binding protein, putative (TIGR) | 0.58 | DVU1605 | uvrB | excinuclease ABC, B subunit (TIGR) | low | > 55 |
| Synechococcus elongatus PCC 7942 | 0.11 | Synpcc7942_1169 | | oligopeptide-binding protein of oligopeptide ABC transporter | 0.57 | Synpcc7942_0563 | uvrB | excinuclease ABC subunit B | low | > 38 |
| Dinoroseobacter shibae DFL-12 | 0.11 | Dshi_0872 | | extracellular solute-binding protein family 5 (RefSeq) | 0.59 | Dshi_2192 | | excinuclease ABC, B subunit (RefSeq) | low | > 64 |
Not shown: 3 genomes with orthologs for ECD_03395 only; 38 genomes with orthologs for ECD_00746 only