Conservation of cofitness between ECD_03281 and ECD_00440 in Escherichia coli BL21

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03281 glycogen synthase 1.0 ECD_00440 PHB domain membrane-anchored putative protease low > 61
Escherichia coli ECRC100 1.00 OKFHMN_16900 glgA glycogen synthase GlgA 1.00 OKFHMN_08000 qmcA Protein QmcA low > 80
Escherichia coli ECRC101 1.00 MCAODC_07430 glgA glycogen synthase GlgA 1.00 MCAODC_27215 qmcA Protein QmcA low > 87
Escherichia coli ECRC62 1.00 BNILDI_02825 glgA glycogen synthase GlgA 1.00 BNILDI_22410 qmcA Protein QmcA low > 75
Escherichia coli ECRC102 1.00 NIAGMN_14670 glgA glycogen synthase GlgA 1.00 NIAGMN_06050 qmcA Protein QmcA
Escherichia coli ECOR38 1.00 HEPCGN_15715 glgA glycogen synthase GlgA 1.00 HEPCGN_06635 qmcA Protein QmcA low > 87
Escherichia coli ECRC99 1.00 KEDOAH_11240 glgA glycogen synthase GlgA 1.00 KEDOAH_19970 qmcA Protein QmcA
Escherichia fergusonii Becca 1.00 EFB2_00390 Glycogen synthase 1.00 EFB2_03566 Protein QmcA low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19625 glycogen synthase GlgA 1.00 ECOLIN_RS02895 SPFH domain-containing protein low > 55
Escherichia coli ECRC98 1.00 JDDGAC_20530 glgA glycogen synthase GlgA 1.00 JDDGAC_11645 qmcA Protein QmcA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00272 Glycogen synthase 1.00 OHPLBJKB_03185 Protein QmcA low > 73
Escherichia coli BW25113 1.00 b3429 glgA glycogen synthase (NCBI) 1.00 b0489 ybbK predicted protease, membrane anchored (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_08690 glgA glycogen synthase GlgA 1.00 NOLOHH_00990 qmcA Protein QmcA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.96 GFF4407 Putative stomatin/prohibitin-family membrane protease subunit YbbK low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.94 EX28DRAFT_2471 Membrane protease subunits, stomatin/prohibitin homologs low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04311 Glycogen synthase 0.94 MPMX20_01087 Protein QmcA low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26200 starch synthase 0.93 BWI76_RS06920 paraslipin low > 92
Pantoea sp. MT58 0.83 IAI47_01695 glycogen synthase GlgA 0.85 IAI47_14385 SPFH/Band 7/PHB domain protein low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS19730 glycogen synthase GlgA 0.80 DDA3937_RS05860 SPFH/Band 7/PHB domain protein low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS19840 glycogen synthase GlgA 0.81 HGI48_RS05905 SPFH/Band 7/PHB domain protein low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS20915 glycogen synthase GlgA 0.81 DZA65_RS06240 SPFH/Band 7/PHB domain protein low > 75
Pectobacterium carotovorum WPP14 0.79 HER17_RS01500 glycogen synthase GlgA 0.84 HER17_RS15610 SPFH/Band 7/PHB domain protein low > 75
Serratia liquefaciens MT49 0.74 IAI46_23925 glycogen synthase GlgA 0.79 IAI46_05325 SPFH/Band 7/PHB domain protein low > 86
Rahnella sp. WP5 0.71 EX31_RS05010 glycogen synthase GlgA 0.78 EX31_RS22590 SPFH/Band 7/PHB domain protein low > 89
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS07615 glycogen synthase 0.36 BPHYT_RS12045 stomatin 2 low > 109
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04861 starch synthase 0.35 H281DRAFT_00629 SPFH domain, Band 7 family protein low > 103
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS23430 glycogen synthase GlgA 0.35 QEN71_RS06515 stomatin-like protein low > 153
Variovorax sp. SCN45 0.48 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.31 GFF234 Protein QmcA (possibly involved in integral membrane quality control) low > 127
Variovorax sp. OAS795 0.48 ABID97_RS04535 glycogen synthase GlgA 0.31 ABID97_RS16545 stomatin-like protein low > 91
Rhodopseudomonas palustris CGA009 0.45 TX73_001985 glycogen synthase GlgA 0.65 TX73_004515 SPFH/Band 7/PHB domain protein low > 86
Paraburkholderia graminis OAS925 0.45 ABIE53_001742 starch synthase 0.35 ABIE53_002483 regulator of protease activity HflC (stomatin/prohibitin superfamily) low > 113
Azospirillum sp. SherDot2 0.43 MPMX19_02225 Glycogen synthase 0.49 MPMX19_00927 Protein QmcA
Marinobacter adhaerens HP15 0.42 HP15_1713 glycogen/starch synthase, ADP-glucose type 0.29 HP15_3867 SPFH domain, Band 7 family protein low > 73
Sinorhizobium meliloti 1021 0.41 SMc03924 glycogen synthase 0.68 SMc04020 hypothetical protein low > 103
Agrobacterium fabrum C58 0.39 Atu4075 glycogen synthase 0.66 Atu3772 hypothetical protein low > 89
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS17230 glycogen synthase GlgA 0.37 ABZR87_RS11935 SPFH domain-containing protein low > 80
Pseudomonas sp. S08-1 0.37 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase 0.67 OH686_11145 Protein QmcA, putative low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS00900 glycogen synthase GlgA 0.37 RPSI07_RS17005 SPFH/Band 7/PHB domain protein low > 81
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16410 glycogen synthase GlgA 0.70 PFLU_RS28885 SPFH/Band 7/PHB domain protein low > 109
Pseudomonas simiae WCS417 0.36 PS417_14480 glycogen synthase 0.70 PS417_27225 protease low > 88
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16410 glycogen synthase GlgA 0.70 PFLU_RS28885 SPFH/Band 7/PHB domain protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.69 Pf6N2E2_4490 Putative stomatin/prohibitin-family membrane protease subunit YbbK low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_26025 glycogen synthase 0.69 AO356_13055 protease low > 104
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.65 PfGW456L13_907 Putative stomatin/prohibitin-family membrane protease subunit YbbK low > 87
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.35 Pf1N1B4_5313 Putative stomatin/prohibitin-family membrane protease subunit YbbK low > 87
Pseudomonas putida KT2440 0.35 PP_4050 glycogen synthase 0.36 PP_4834 SPFH domain/Band 7 family protein low > 96
Ralstonia solanacearum UW163 0.35 UW163_RS22835 glycogen synthase GlgA 0.36 UW163_RS13815 SPFH/Band 7/PHB domain protein
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS22290 glycogen synthase GlgA 0.36 RALBFv3_RS00485 SPFH/Band 7/PHB domain protein low > 76
Ralstonia solanacearum GMI1000 0.34 RS_RS18320 glycogen synthase 0.36 RS_RS07140 SPFH/Band 7/PHB domain protein low > 80
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS12515 glycogen synthase 0.34 HSERO_RS10975 stomatin 2 low > 78
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.66 Xcc-8004.1565.1 Putative stomatin/prohibitin-family membrane protease subunit YbbK low > 74
Bosea sp. OAE506 0.33 ABIE41_RS13060 glycogen synthase GlgA 0.64 ABIE41_RS08420 SPFH domain-containing protein low > 77
Fusobacterium nucleatum SB010 0.30 HUW76_05855 glycogen synthase 0.36 HUW76_09515 SPFH/Band 7/PHB domain protein low > 35
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_2518 glgA glycogen synthase 0.16 Synpcc7942_2412 phb SPFH domain, Band 7 family protein
Vibrio cholerae E7946 ATCC 55056 0.27 CSW01_08685 glycogen synthase 0.72 CSW01_04985 paraslipin low > 62
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS18980 glycogen synthase 0.09 ABZR88_RS01215 SPFH domain-containing protein low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS04140 glycogen synthase 0.13 CA265_RS19545 protease low > 88
Shewanella amazonensis SB2B 0.16 Sama_2449 starch synthase (RefSeq) 0.29 Sama_0415 SPFH domain-containing protein/band 7 family protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.15 SO1499 glgA glycogen synthase (NCBI ptt file) 0.32 SO4129 SPFH domain/Band 7 family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) 0.31 Shewana3_3677 SPFH domain-containing protein/band 7 family protein (RefSeq) low > 73
Shewanella loihica PV-4 0.13 Shew_1172 starch synthase (RefSeq) 0.31 Shew_3387 band 7 protein (RefSeq) low > 60

Not shown: 13 genomes with orthologs for ECD_03281 only; 19 genomes with orthologs for ECD_00440 only