Conservation of cofitness between DDA3937_RS15930 and DDA3937_RS15745 in Dickeya dadantii 3937

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dadantii 3937 1.0 DDA3937_RS15930 DNA/RNA nuclease SfsA 1.0 DDA3937_RS15745 elongation factor 4 0.60 12
Dickeya dianthicola 67-19 0.97 HGI48_RS16045 DNA/RNA nuclease SfsA 0.99 HGI48_RS15830 elongation factor 4 low > 71
Dickeya dianthicola ME23 0.97 DZA65_RS17130 DNA/RNA nuclease SfsA 0.99 DZA65_RS16910 elongation factor 4 low > 75
Pectobacterium carotovorum WPP14 0.70 HER17_RS05585 DNA/RNA nuclease SfsA 0.94 HER17_RS05805 translation elongation factor 4 low > 75
Rahnella sp. WP5 0.68 EX31_RS03245 DNA/RNA nuclease SfsA 0.92 EX31_RS21825 elongation factor 4 low > 89
Serratia liquefaciens MT49 0.68 IAI46_21205 DNA/RNA nuclease SfsA 0.93 IAI46_19560 elongation factor 4 low > 86
Enterobacter sp. TBS_079 0.67 MPMX20_00832 Sugar fermentation stimulation protein A 0.93 MPMX20_03440 Elongation factor 4 low > 85
Escherichia coli ECRC101 0.66 MCAODC_00855 sfsA DNA/RNA nuclease SfsA 0.91 MCAODC_11930 lepA translation elongation factor 4 low > 87
Escherichia coli ECRC98 0.66 JDDGAC_13935 sfsA DNA/RNA nuclease SfsA 0.91 JDDGAC_25065 lepA translation elongation factor 4 low > 86
Escherichia coli BL21 0.66 ECD_00145 sugar fermentation stimulation protein A 0.91 ECD_02463 back-translocating elongation factor EF4, GTPase low > 61
Escherichia coli ECRC99 0.66 KEDOAH_17815 sfsA DNA/RNA nuclease SfsA 0.91 KEDOAH_06820 lepA translation elongation factor 4 — —
Escherichia coli BW25113 0.66 b0146 sfsA sugar fermentation stimulation protein A (NCBI) 0.91 b2569 lepA GTP-binding protein LepA (NCBI) low > 76
Escherichia coli ECRC102 0.66 NIAGMN_08190 sfsA DNA/RNA nuclease SfsA 0.91 NIAGMN_19170 lepA translation elongation factor 4 — —
Escherichia coli ECRC100 0.66 OKFHMN_10340 sfsA DNA/RNA nuclease SfsA 0.91 OKFHMN_21400 lepA translation elongation factor 4 low > 80
Escherichia coli ECOR27 0.66 NOLOHH_02685 sfsA DNA/RNA nuclease SfsA 0.91 NOLOHH_13075 lepA translation elongation factor 4 low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03516 Sugar fermentation stimulation protein A 0.91 OHPLBJKB_01138 Elongation factor 4 low > 73
Escherichia coli ECRC62 0.66 BNILDI_08985 sfsA DNA/RNA nuclease SfsA 0.91 BNILDI_11875 lepA translation elongation factor 4 low > 75
Escherichia coli ECOR38 0.66 HEPCGN_08290 sfsA DNA/RNA nuclease SfsA 0.91 HEPCGN_20545 lepA translation elongation factor 4 low > 87
Klebsiella michiganensis M5al 0.66 BWI76_RS05020 sugar fermentation stimulation protein SfsA 0.93 BWI76_RS21335 elongation factor 4 — —
Escherichia coli Nissle 1917 0.65 ECOLIN_RS00820 DNA/RNA nuclease SfsA 0.91 ECOLIN_RS14540 translation elongation factor 4 — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3735 sugar fermentation stimulation protein 0.93 EX28DRAFT_0076 elongation factor 4 low > 76
Pantoea sp. MT58 0.65 IAI47_15630 DNA/RNA nuclease SfsA 0.91 IAI47_04870 elongation factor 4 low > 76
Escherichia fergusonii Becca 0.65 EFB2_03898 Sugar fermentation stimulation protein A 0.91 EFB2_01327 Elongation factor 4 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF86 Sugar/maltose fermentation stimulation protein homolog 0.91 GFF2477 Translation elongation factor LepA low > 78
Erwinia tracheiphila SCR3 0.64 LU632_RS20075 sfsA DNA/RNA nuclease SfsA 0.93 LU632_RS15395 lepA translation elongation factor 4 low > 74
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_03160 DNA/RNA nuclease SfsA 0.85 CSW01_12465 elongation factor 4 low > 62
Shewanella loihica PV-4 0.57 Shew_3128 sugar fermentation stimulation protein (RefSeq) 0.82 Shew_1052 GTP-binding protein LepA (RefSeq) low > 60
Shewanella oneidensis MR-1 0.54 SO0875 sfsA sugar fermentation stimulation protein (NCBI ptt file) 0.82 SO1346 lepA GTP-binding protein LepA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_3403 sugar fermentation stimulation protein A (RefSeq) 0.82 Shewana3_3028 GTP-binding protein LepA (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_0781 sugar fermentation stimulation protein A (RefSeq) 0.80 Sama_0878 GTP-binding protein LepA (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.51 B158DRAFT_0055 sugar fermentation stimulation protein 0.82 B158DRAFT_2184 GTP-binding protein LepA low > 40
Marinobacter adhaerens HP15 0.47 HP15_333 sugar fermentation stimulation protein-like protein 0.74 HP15_781 GTP-binding protein LepA low > 73
Pseudomonas putida KT2440 0.45 PP_4691 sugar fermentation stimulation protein A 0.76 PP_1431 Elongation factor 4 — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.75 Psyr_3954 GTP-binding protein LepA low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0837 Sugar fermentation stimulation protein 0.75 Psyr_3954 GTP-binding protein LepA low > 86
Pseudomonas sp. RS175 0.44 PFR28_03712 Sugar fermentation stimulation protein A 0.75 PFR28_03525 Elongation factor 4 — —
Dechlorosoma suillum PS 0.44 Dsui_0297 sugar fermentation stimulation protein 0.70 Dsui_2457 GTP-binding protein LepA low > 51
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_5162 Sugar/maltose fermentation stimulation protein homolog 0.75 Pf6N2E2_5423 Translation elongation factor LepA — —
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.75 PFLU_RS05250 elongation factor 4 0.15 34
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_16105 XRE family transcriptional regulator 0.75 AO356_17485 elongation factor 4 low > 104
Pseudomonas fluorescens SBW25 0.43 PFLU_RS25705 DNA/RNA nuclease SfsA 0.75 PFLU_RS05250 elongation factor 4 low > 109
Alteromonas macleodii MIT1002 0.43 MIT1002_03689 Sugar fermentation stimulation protein A 0.81 MIT1002_02715 Elongation factor 4 low > 70
Pseudomonas sp. S08-1 0.42 OH686_17290 sugar fermentation stimulation protein 0.74 OH686_20065 elongation factor 4 low > 80
Pseudomonas simiae WCS417 0.42 PS417_23865 XRE family transcriptional regulator 0.75 PS417_05180 elongation factor 4 — —
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2864 Sugar/maltose fermentation stimulation protein homolog 0.75 Pf1N1B4_895 Translation elongation factor LepA — —
Pseudomonas stutzeri RCH2 0.42 Psest_1005 sugar fermentation stimulation protein 0.75 Psest_3095 GTP-binding protein LepA — —
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1530 Sugar/maltose fermentation stimulation protein homolog 0.75 PfGW456L13_4842 Translation elongation factor LepA low > 87
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_14430 XRE family transcriptional regulator 0.75 AO353_04520 elongation factor 4 low > 101
Magnetospirillum magneticum AMB-1 0.41 AMB_RS08095 DNA/RNA nuclease SfsA 0.64 AMB_RS19545 elongation factor 4 low > 64
Phaeobacter inhibens DSM 17395 0.37 PGA1_c29210 sugar fermentation stimulation protein A 0.59 PGA1_c24090 GTP-binding protein LepA — —
Dinoroseobacter shibae DFL-12 0.36 Dshi_0118 sugar fermentation stimulation protein (RefSeq) 0.58 Dshi_0809 GTP-binding protein LepA (RefSeq) low > 64
Azospirillum brasilense Sp245 0.36 AZOBR_RS04410 XRE family transcriptional regulator 0.62 AZOBR_RS00860 elongation factor 4 low > 97
Agrobacterium fabrum C58 0.36 Atu1605 sugar fermentation stimulation protein 0.61 Atu0241 GTP-binding protein LepA — —
Azospirillum sp. SherDot2 0.35 MPMX19_00188 Sugar fermentation stimulation protein A 0.62 MPMX19_00092 Elongation factor 4 — —
Rhodospirillum rubrum S1H 0.33 Rru_A0735 Sugar fermentation stimulation protein (NCBI) 0.59 Rru_A3365 Small GTP-binding protein domain (NCBI) — —
Sinorhizobium meliloti 1021 0.32 SMc00297 sugar fermentation stimulation protein A 0.61 SMc00349 GTP-binding protein LepA low > 103
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_2040 sfsA sugar fermentation stimulation protein A 0.59 Synpcc7942_0479 lepA GTP-binding protein LepA low > 38
Caulobacter crescentus NA1000 0.29 CCNA_02757 sugar fermentation stimulation protein A 0.61 CCNA_01086 GTP-binding protein lepA low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_02757 sugar fermentation stimulation protein A 0.61 CCNA_01086 GTP-binding protein lepA low > 67
Desulfovibrio vulgaris Hildenborough JW710 0.27 DVU3224 sfsA sugar fermentation stimulation protein (TIGR) 0.61 DVU0703 lepA GTP-binding protein LepA (TIGR) low > 55

Not shown: 0 genomes with orthologs for DDA3937_RS15930 only; 42 genomes with orthologs for DDA3937_RS15745 only