| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_00180 | | cytochrome c oxidase accessory protein CcoG | 1.0 | CSW01_14085 | | transcriptional regulator | 0.67 | 9 |
| Shewanella oneidensis MR-1 | 0.62 | SO4737 | | iron-sulfur cluster-binding protein (NCBI ptt file) | 0.69 | SO3401 | | conserved hypothetical protein TIGR01033 (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_4121 | | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) | 0.70 | Shewana3_1155 | | hypothetical protein (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.58 | Shew_3812 | | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) | 0.73 | Shew_3408 | | hypothetical protein (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.58 | Sama_3633 | | iron-sulfur cluster-binding protein (RefSeq) | 0.70 | Sama_2410 | | hypothetical protein (RefSeq) | 0.59 | 31 |
| Alteromonas macleodii MIT1002 | 0.55 | MIT1002_00719 | | cytochrome c oxidase accessory protein CcoG | 0.74 | MIT1002_00845 | | putative transcriptional regulatory protein YeeN | low | > 70 |
| Pseudomonas sp. S08-1 | 0.51 | OH686_02210 | | cytochrome c oxidase accessory protein CcoG | 0.27 | OH686_19120 | | Probable transcriptional regulatory protein YebC | low | > 80 |
| Pseudomonas sp. DMC3 | 0.51 | GFF718 | | hypothetical protein | 0.32 | GFF5187 | | Transcriptional regulatory protein PmpR | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.50 | AO356_02455 | | (Fe-S)-binding protein | 0.31 | AO356_18010 | | hypothetical protein | low | > 104 |
| Pseudomonas segetis P6 | 0.50 | ACVTMO_RS11490 | ccoG | cytochrome c oxidase accessory protein CcoG | 0.27 | ACVTMO_RS08345 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 75 |
| Pseudomonas sp. FW215-L2 | 0.50 | GFF1251 | | hypothetical protein | 0.29 | GFF3356 | | Transcriptional regulatory protein PmpR | low | > 111 |
| Pseudomonas fluorescens FW300-N2E2 | 0.50 | Pf6N2E2_2316 | | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation | 0.31 | Pf6N2E2_5534 | | FIG000859: hypothetical protein YebC | low | > 103 |
| Pseudomonas fluorescens FW300-N2E3 | 0.50 | AO353_00630 | | (Fe-S)-binding protein | 0.30 | AO353_03595 | | hypothetical protein | low | > 101 |
| Pseudomonas aeruginosa PUPa3 | 0.50 | NPBIFN_03625 | ccoG | cytochrome c oxidase accessory protein CcoG | 0.28 | NPBIFN_04220 | pmpR | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Pseudomonas aeruginosa PA14 | 0.50 | IKLFDK_07410 | | cytochrome c oxidase accessory protein CcoG | 0.28 | IKLFDK_04360 | | YebC/PmpR family DNA-binding transcriptional regulator | 0.46 | 72 |
| Pseudomonas aeruginosa MRSN321 | 0.50 | PFGADD_03589 | ccoG | cytochrome c oxidase accessory protein CcoG | 0.28 | PFGADD_04161 | pmpR | YebC/PmpR family DNA-binding transcriptional regulator | low | > 99 |
| Pseudomonas protegens RBAN4 | 0.50 | FABNJH_09955 | ccoG | cytochrome c oxidase accessory protein CcoG | 0.33 | FABNJH_24105 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Pseudomonas simiae WCS417 | 0.50 | PS417_20750 | | (Fe-S)-binding protein | 0.30 | PS417_22460 | | hypothetical protein | — | — |
| Pseudomonas sp. SVBP6 | 0.50 | COO64_RS18670 | ccoG | cytochrome c oxidase accessory protein CcoG | 0.30 | COO64_RS20085 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 91 |
| Pseudomonas sp. RS175 | 0.50 | PFR28_01085 | | hypothetical protein | 0.31 | PFR28_03415 | | Transcriptional regulatory protein PmpR | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.50 | PFLU_RS22360 | | cytochrome c oxidase accessory protein CcoG | 0.30 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.50 | PFLU_RS22360 | | cytochrome c oxidase accessory protein CcoG | 0.30 | PFLU_RS24100 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 109 |
| Pseudomonas orientalis W4I3 | 0.50 | QF045_RS22555 | | cytochrome c oxidase accessory protein CcoG | 0.25 | QF045_RS24625 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 93 |
| Pseudomonas fluorescens GW456-L13 | 0.50 | PfGW456L13_4065 | | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation | 0.32 | PfGW456L13_1850 | | FIG000859: hypothetical protein YebC | low | > 87 |
| Pseudomonas stutzeri RCH2 | 0.50 | Psest_2531 | | cytochrome c oxidase accessory protein FixG | 0.28 | Psest_1494 | | DNA-binding regulatory protein, YebC/PmpR family | — | — |
| Pseudomonas lactucae CFBP13502 | 0.50 | GEMAOFIL_04295 | | hypothetical protein | 0.29 | GEMAOFIL_04644 | | Transcriptional regulatory protein PmpR | 0.59 | 60 |
| Pseudomonas sp. BP01 | 0.49 | JOY50_RS00095 | ccoG | cytochrome c oxidase accessory protein CcoG | 0.28 | JOY50_RS01830 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 84 |
| Pseudomonas putida KT2440 | 0.49 | PP_4259 | | Iron-sulfur cluster-binding protein | 0.27 | PP_1214 | | putative transcriptional regulatory protein | low | > 96 |
| Marinobacter adhaerens HP15 | 0.48 | HP15_2111 | | iron-sulfur cluster-binding protein | 0.67 | HP15_899 | | protein YeeN | low | > 73 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_4673 | | 4Fe-4S ferredoxin, iron-sulfur binding | 0.31 | Pf1N1B4_640 | | FIG000859: hypothetical protein YebC | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3419 | | 4Fe-4S ferredoxin, iron-sulfur binding protein | 0.32 | Psyr_1407 | | Protein of unknown function DUF28 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3419 | | 4Fe-4S ferredoxin, iron-sulfur binding protein | 0.32 | Psyr_1407 | | Protein of unknown function DUF28 | low | > 86 |
| Kangiella aquimarina DSM 16071 | 0.45 | B158DRAFT_1970 | | cytochrome c oxidase accessory protein FixG | 0.67 | B158DRAFT_0606 | | Uncharacterized conserved protein | low | > 40 |
| Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_972 | | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation | 0.29 | Ac3H11_2422 | | FIG000859: hypothetical protein | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF4139 | | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation | 0.27 | GFF4523 | | FIG000859: hypothetical protein YebC | low | > 92 |
| Variovorax sp. SCN45 | 0.40 | GFF6960 | | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation | 0.29 | GFF303 | | Probable transcriptional regulatory protein YebC | low | > 127 |
| Methylophilus sp. DMC18 | 0.39 | GFF1761 | | hypothetical protein | 0.33 | GFF2324 | | Transcriptional regulatory protein PmpR | low | > 43 |
| Variovorax sp. OAS795 | 0.39 | ABID97_RS16205 | | cytochrome c oxidase accessory protein CcoG | 0.28 | ABID97_RS16740 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 91 |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS16035 | | cytochrome C oxidase | 0.33 | HSERO_RS17750 | | transcriptional regulator | — | — |
| Collimonas humicola GW821-FHT01A05 | 0.39 | MPMX01_01783 | | hypothetical protein | 0.32 | MPMX01_01098 | | putative transcriptional regulatory protein | low | > 87 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS06850 | | cytochrome c oxidase accessory protein CcoG | 0.28 | ABCV34_RS02555 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 48 |
| Dechlorosoma suillum PS | 0.39 | Dsui_0928 | | cytochrome c oxidase accessory protein FixG | 0.32 | Dsui_0489 | | DNA-binding regulatory protein, YebC/PmpR family | low | > 51 |
| Lysobacter sp. OAE881 | 0.38 | ABIE51_RS03830 | | 4Fe-4S dicluster domain-containing protein | 0.32 | ABIE51_RS05035 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 62 |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS11165 | | cytochrome c oxidase accessory protein CcoG | 0.33 | ABZR87_RS15405 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS12890 | | cytochrome C oxidase | 0.33 | RR42_RS04735 | | hypothetical protein | low | > 128 |
| Ralstonia solanacearum IBSBF1503 | 0.37 | RALBFv3_RS15635 | | cytochrome c oxidase accessory protein CcoG | 0.32 | RALBFv3_RS03540 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Ralstonia solanacearum UW163 | 0.37 | UW163_RS13095 | | cytochrome c oxidase accessory protein CcoG | 0.32 | UW163_RS10130 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Ralstonia solanacearum GMI1000 | 0.36 | RS_RS06415 | | cytochrome c oxidase accessory protein CcoG | 0.32 | RS_RS10990 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.36 | RPSI07_RS17720 | | cytochrome c oxidase accessory protein CcoG | 0.32 | RPSI07_RS13685 | | YebC/PmpR family DNA-binding transcriptional regulator | — | — |
| Agrobacterium fabrum C58 | 0.29 | Atu1530 | | nitrogen fixation protein FixG | 0.30 | Atu3727 | | hypothetical protein | low | > 89 |
| Rhizobium sp. OAE497 | 0.28 | ABIE40_RS26145 | | cytochrome c oxidase accessory protein CcoG | 0.30 | ABIE40_RS15665 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 107 |
| Bosea sp. OAE506 | 0.28 | ABIE41_RS10545 | | cytochrome c oxidase accessory protein CcoG | 0.28 | ABIE41_RS09460 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 77 |
| Xanthobacter sp. DMC5 | 0.28 | GFF4626 | | hypothetical protein | 0.27 | GFF83 | | putative transcriptional regulatory protein | — | — |
| Dinoroseobacter shibae DFL-12 | 0.27 | Dshi_0665 | | Cytochrome c oxidase cbb3 type accessory protein FixG (RefSeq) | 0.27 | Dshi_2762 | | protein of unknown function DUF28 (RefSeq) | low | > 64 |
| Sinorhizobium meliloti 1021 | 0.27 | SMa1211 | | FixG iron sulfur membrane protein | 0.30 | SMc03969 | | hypothetical protein | low | > 103 |
| Rhodopseudomonas palustris CGA009 | 0.26 | TX73_005210 | | cytochrome c oxidase accessory protein CcoG | 0.29 | TX73_005640 | | YebC/PmpR family DNA-binding transcriptional regulator | low | > 86 |
| Sphingobium sp. HT1-2 | 0.25 | GFF4333 | | Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation | 0.28 | GFF491 | | Probable transcriptional regulatory protein YebC | — | — |
Not shown: 5 genomes with orthologs for CSW01_00180 only; 57 genomes with orthologs for CSW01_14085 only