Conservation of cofitness between CSW01_05965 and CSW01_13375 in Vibrio cholerae E7946 ATCC 55056

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_05965 threonylcarbamoyl-AMP synthase 1.0 CSW01_13375 acetylglutamate kinase 0.47 7
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2720 Hypothetical YciO protein, TsaC/YrdC paralog 0.52 GFF2345 Acetylglutamate kinase (EC 2.7.2.8) low > 78
Escherichia coli ECRC62 0.77 BNILDI_18450 yciO L-threonylcarbamoyladenylate synthase 0.53 BNILDI_05800 acetylglutamate kinase low > 75
Escherichia coli ECRC100 0.77 OKFHMN_02640 yciO L-threonylcarbamoyladenylate synthase 0.53 OKFHMN_13580 acetylglutamate kinase low > 79
Escherichia coli ECRC102 0.77 NIAGMN_26810 yciO L-threonylcarbamoyladenylate synthase 0.53 NIAGMN_11330 acetylglutamate kinase low > 80
Escherichia coli BW25113 0.77 b1267 yciO orf, hypothetical protein (VIMSS) 0.53 b3959 argB acetylglutamate kinase (RefSeq) — —
Escherichia coli ECRC98 0.77 JDDGAC_05185 yciO L-threonylcarbamoyladenylate synthase 0.53 JDDGAC_17205 acetylglutamate kinase low > 87
Escherichia coli ECOR27 0.77 NOLOHH_20300 yciO L-threonylcarbamoyladenylate synthase 0.53 NOLOHH_05725 acetylglutamate kinase low > 76
Escherichia coli Nissle 1917 0.77 ECOLIN_RS07625 L-threonylcarbamoyladenylate synthase 0.53 ECOLIN_RS22850 acetylglutamate kinase — —
Escherichia fergusonii Becca 0.77 EFB2_02660 putative protein YciO 0.53 EFB2_04655 Acetylglutamate kinase low > 86
Escherichia coli BL21 0.77 ECD_01241 putative RNA binding protein 0.53 ECD_03844 acetylglutamate kinase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_02417 putative protein YciO 0.53 OHPLBJKB_04091 Acetylglutamate kinase low > 74
Escherichia coli ECRC101 0.77 MCAODC_15625 yciO L-threonylcarbamoyladenylate synthase 0.53 MCAODC_04080 acetylglutamate kinase low > 87
Escherichia coli ECOR38 0.77 HEPCGN_25550 yciO L-threonylcarbamoyladenylate synthase 0.52 HEPCGN_12225 acetylglutamate kinase low > 88
Escherichia coli ECRC99 0.77 KEDOAH_26110 yciO L-threonylcarbamoyladenylate synthase 0.53 KEDOAH_14580 acetylglutamate kinase — —
Klebsiella michiganensis M5al 0.77 BWI76_RS11870 hypothetical protein 0.54 BWI76_RS00850 acetylglutamate kinase low > 92
Klebsiella pneumoniae MKP103 0.77 KDGMDA_19575 L-threonylcarbamoyladenylate synthase 0.53 KDGMDA_09370 acetylglutamate kinase low > 95
Rahnella sp. WP5 0.76 EX31_RS09945 threonylcarbamoyl-AMP synthase 0.55 EX31_RS14185 acetylglutamate kinase low > 89
Enterobacter sp. TBS_079 0.76 MPMX20_02508 putative protein YciO 0.52 MPMX20_04521 Acetylglutamate kinase low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0939 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 0.53 EX28DRAFT_4421 N-acetylglutamate kinase (EC 2.7.2.8) low > 76
Serratia liquefaciens MT49 0.76 IAI46_14010 threonylcarbamoyl-AMP synthase 0.57 IAI46_24510 acetylglutamate kinase low > 87
Dickeya dadantii 3937 0.75 DDA3937_RS10495 threonylcarbamoyl-AMP synthase 0.59 DDA3937_RS20345 acetylglutamate kinase low > 74
Dickeya dianthicola ME23 0.74 DZA65_RS10975 threonylcarbamoyl-AMP synthase 0.59 DZA65_RS00940 acetylglutamate kinase low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS10495 threonylcarbamoyl-AMP synthase 0.59 HGI48_RS00880 acetylglutamate kinase low > 71
Erwinia tracheiphila SCR3 0.74 LU632_RS12745 threonylcarbamoyl-AMP synthase 0.57 LU632_RS19610 argB acetylglutamate kinase low > 73
Erwinia tracheiphila HP pepo 2.2 0.74 IJEDHG_23520 L-threonylcarbamoyladenylate synthase 0.57 IJEDHG_13050 acetylglutamate kinase low > 61
Alteromonas macleodii MIT1002 0.74 MIT1002_01432 t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN 0.39 MIT1002_00470 Acetylglutamate kinase low > 70
Erwinia amylovora T8 0.73 OLJFJH_13505 L-threonylcarbamoyladenylate synthase 0.54 OLJFJH_06120 acetylglutamate kinase low > 58
Pectobacterium carotovorum WPP14 0.73 HER17_RS10905 threonylcarbamoyl-AMP synthase 0.58 HER17_RS20625 acetylglutamate kinase low > 75
Shewanella amazonensis SB2B 0.73 Sama_2127 Sua5/YciO/YrdC/YwlC family protein (RefSeq) 0.43 Sama_0257 acetylglutamate kinase (RefSeq) low > 62
Pantoea sp. MT58 0.72 IAI47_09200 threonylcarbamoyl-AMP synthase 0.58 IAI47_00910 acetylglutamate kinase low > 76
Pantoea agglomerans CFBP13505 P0401 0.72 PagCFBP13505_RS06985 threonylcarbamoyl-AMP synthase 0.58 PagCFBP13505_RS18430 acetylglutamate kinase low > 74
Shewanella sp. ANA-3 0.67 Shewana3_1522 translation factor SUA5 (RefSeq) 0.46 Shewana3_3904 acetylglutamate kinase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO3016 Sua5/YciO/YrdC/YwlC family protein (NCBI ptt file) 0.45 SO0276 argB acetylglutamate kinase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.67 Shew_2249 Sua5/YciO/YrdC/YwlC family protein (RefSeq) 0.48 Shew_0203 acetylglutamate kinase (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.66 Psest_1888 Sua5/YciO/YrdC/YwlC family protein 0.23 Psest_3807 acetylglutamate kinase — —
Marinobacter adhaerens HP15 0.66 HP15_1188 Sua5/YciO/YrdC/YwlC family protein 0.19 HP15_3317 acetylglutamate kinase low > 73
Pseudomonas sp. S08-1 0.65 OH686_20800 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 0.22 OH686_13600 N-acetylglutamate kinase low > 80
Pseudomonas sp. BP01 0.64 JOY50_RS01070 L-threonylcarbamoyladenylate synthase 0.21 JOY50_RS09040 argB acetylglutamate kinase — —
Pseudomonas segetis P6 0.64 MPMX49_02912 putative protein YciO 0.22 MPMX49_00025 Acetylglutamate kinase — —
Pseudomonas aeruginosa PA14 0.64 IKLFDK_16260 L-threonylcarbamoyladenylate synthase 0.21 IKLFDK_26840 Acetylglutamate kinase low > 98
Pseudomonas aeruginosa MRSN321 0.64 DY961_RS00920 L-threonylcarbamoyladenylate synthase 0.21 DY961_RS12505 argB;go_function=acetylglutamate acetylglutamate kinase low > 100
Pseudomonas aeruginosa PUPa3 0.64 DQ20_RS40120 L-threonylcarbamoyladenylate synthase 0.21 DQ20_RS49620 argB;go_function=acetylglutamate acetylglutamate kinase low > 101
Pseudomonas putida KT2440 0.63 PP_4499 putative maturation enzyme 0.21 PP_5289 Acetylglutamate kinase low > 96
Pseudomonas sp. SVBP6 0.62 COO64_RS21750 L-threonylcarbamoyladenylate synthase 0.22 COO64_RS01490 argB acetylglutamate kinase low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_3585 Sua5/YciO/YrdC/YwlC 0.21 Psyr_0218 N-acetylglutamate kinase — —
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_3585 Sua5/YciO/YrdC/YwlC 0.21 Psyr_0218 N-acetylglutamate kinase — —
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS05920 L-threonylcarbamoyladenylate synthase 0.20 QEN71_RS00305 acetylglutamate kinase — —
Paraburkholderia bryophila 376MFSha3.1 0.54 H281DRAFT_00505 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 0.19 H281DRAFT_02211 N-acetylglutamate kinase — —
Paraburkholderia graminis OAS925 0.54 ABIE53_002753 tRNA threonylcarbamoyl adenosine modification protein (Sua5/YciO/YrdC/YwlC family) 0.19 ABIE53_000417 acetylglutamate kinase — —
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS14870 threonylcarbamoyl-AMP synthase 0.19 RALBFv3_RS09580 acetylglutamate kinase — —
Ralstonia solanacearum UW163 0.54 UW163_RS12340 threonylcarbamoyl-AMP synthase 0.19 UW163_RS04000 acetylglutamate kinase — —
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS12635 translation factor Sua5 0.20 BPHYT_RS01610 acetylglutamate kinase — —
Variovorax sp. SCN45 0.52 GFF5789 YciO protein, TsaC/YrdC paralog 0.20 GFF4624 N-acetylglutamate kinase (EC 2.7.2.8) — —
Variovorax sp. OAS795 0.52 ABID97_RS22605 L-threonylcarbamoyladenylate synthase 0.20 ABID97_RS05760 acetylglutamate kinase — —
Acinetobacter radioresistens SK82 0.52 MPMX26_02446 putative protein YciO 0.20 MPMX26_02413 Acetylglutamate kinase low > 36
Acinetobacter baumannii LAC-4 0.52 RR41_RS15200 threonylcarbamoyl-AMP synthase 0.22 RR41_RS14845 acetylglutamate kinase low > 55
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF110 Hypothetical YciO protein, TsaC/YrdC paralog 0.20 GFF409 Acetylglutamate kinase (EC 2.7.2.8) — —
Castellaniella sp019104865 MT123 0.48 ABCV34_RS15815 L-threonylcarbamoyladenylate synthase 0.18 ABCV34_RS14295 acetylglutamate kinase — —
Cellulophaga baltica 18 0.42 M666_RS15410 L-threonylcarbamoyladenylate synthase 0.16 M666_RS02660 acetylglutamate kinase low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.42 CA264_02115 threonylcarbamoyl-AMP synthase 0.12 CA264_06235 acetylglutamate kinase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS07615 L-threonylcarbamoyladenylate synthase 0.18 ABZR88_RS09860 acetylglutamate kinase — —
Pedobacter sp. GW460-11-11-14-LB5 0.40 CA265_RS05100 threonylcarbamoyl-AMP synthase 0.16 CA265_RS18510 acetylglutamate kinase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.40 Echvi_0371 Sua5/YciO/YrdC/YwlC family protein 0.15 Echvi_3850 acetylglutamate kinase low > 79
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS05180 L-threonylcarbamoyladenylate synthase 0.16 HMPREF1078_RS15335 acetylglutamate kinase low > 61
Synechocystis sp000284455 PCC 6803 0.40 SGL_RS02660 L-threonylcarbamoyladenylate synthase 0.19 SGL_RS05885 acetylglutamate kinase — —
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04938 Sua5/YciO/YrdC/YwlC family protein 0.16 BACOVA_01910 acetylglutamate kinase low > 96
Bacteroides thetaiotaomicron VPI-5482 0.35 BT4128 conserved hypothetical protein (NCBI ptt file) 0.16 BT3395 N-succinylglutamate kinase (EC 2.7.2.-) (from data) low > 81
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_2350 translation factor SUA5 0.21 Synpcc7942_1496 argB acetylglutamate kinase — —
Phocaeicola dorei CL03T12C01 0.34 ABI39_RS10130 threonylcarbamoyl-AMP synthase 0.16 ABI39_RS04685 acetylglutamate kinase low > 72
Phocaeicola vulgatus CL09T03C04 0.34 HMPREF1058_RS14510 threonylcarbamoyl-AMP synthase 0.15 HMPREF1058_RS12115 acetylglutamate kinase low > 67
Bacteroides stercoris CC31F 0.32 HMPREF1181_RS06425 threonylcarbamoyl-AMP synthase 0.16 HMPREF1181_RS02540 acetylglutamate kinase low > 56

Not shown: 21 genomes with orthologs for CSW01_05965 only; 12 genomes with orthologs for CSW01_13375 only