Conservation of cofitness between CSW01_01875 and CSW01_12680 in Vibrio cholerae E7946 ATCC 55056

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01875 hypothetical protein 1.0 CSW01_12680 cytosol aminopeptidase 0.83 18
Rahnella sp. WP5 0.66 EX31_RS04470 transcriptional regulator 0.83 EX31_RS04385 leucyl aminopeptidase low > 89
Dickeya dianthicola ME23 0.66 DZA65_RS20560 transcriptional regulator 0.83 DZA65_RS02060 leucyl aminopeptidase low > 75
Serratia liquefaciens MT49 0.66 IAI46_23490 transcriptional regulator 0.83 IAI46_02360 leucyl aminopeptidase low > 87
Dickeya dianthicola 67-19 0.66 HGI48_RS19440 transcriptional regulator 0.83 HGI48_RS01955 leucyl aminopeptidase low > 71
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_12210 Uncharacterized protein YheO 0.84 IJEDHG_14170 pepA leucyl aminopeptidase — —
Dickeya dadantii 3937 0.66 DDA3937_RS19340 transcriptional regulator 0.83 DDA3937_RS01995 leucyl aminopeptidase low > 74
Erwinia tracheiphila SCR3 0.66 LU632_RS22710 transcriptional regulator 0.84 LU632_RS20855 pepA leucyl aminopeptidase low > 73
Erwinia amylovora T8 0.66 OLJFJH_03930 Uncharacterized protein YheO 0.84 OLJFJH_07380 leucyl aminopeptidase low > 58
Pectobacterium carotovorum WPP14 0.65 HER17_RS02010 transcriptional regulator 0.81 HER17_RS19450 leucyl aminopeptidase low > 75
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS21525 transcriptional regulator 0.83 PagCFBP13505_RS08910 leucyl aminopeptidase low > 74
Pantoea sp. MT58 0.65 IAI47_02055 transcriptional regulator 0.83 IAI47_16795 leucyl aminopeptidase low > 76
Escherichia coli ECOR38 0.64 HEPCGN_16130 yheO Uncharacterized protein YheO 0.82 HEPCGN_09980 pepA leucyl aminopeptidase low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3726 YheO-like PAS domain 0.82 GFF949 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 78
Escherichia coli ECRC98 0.64 JDDGAC_20930 yheO Uncharacterized protein YheO 0.82 JDDGAC_15430 pepA leucyl aminopeptidase low > 87
Escherichia coli BW25113 0.64 b3346 yheO orf, hypothetical protein (VIMSS) 0.82 b4260 pepA leucyl aminopeptidase (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06760 Uncharacterized protein YheO 0.81 KDGMDA_11530 leucyl aminopeptidase low > 95
Escherichia coli ECRC62 0.64 BNILDI_02420 yheO Uncharacterized protein YheO 0.82 BNILDI_07455 pepA leucyl aminopeptidase low > 75
Escherichia coli ECRC102 0.64 NIAGMN_15070 yheO Uncharacterized protein YheO 0.82 NIAGMN_09640 pepA leucyl aminopeptidase low > 80
Escherichia coli ECOR27 0.64 NOLOHH_09100 yheO Uncharacterized protein YheO 0.82 NOLOHH_04055 pepA leucyl aminopeptidase low > 76
Escherichia coli ECRC100 0.64 OKFHMN_17300 yheO Uncharacterized protein YheO 0.82 OKFHMN_11790 pepA leucyl aminopeptidase low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00357 Transcriptional regulator DauR 0.82 OHPLBJKB_03776 Cytosol aminopeptidase low > 74
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19165 transcriptional regulator 0.82 ECOLIN_RS24695 leucyl aminopeptidase low > 55
Escherichia coli ECRC101 0.64 MCAODC_07830 yheO Uncharacterized protein YheO 0.82 MCAODC_02295 pepA leucyl aminopeptidase low > 87
Escherichia fergusonii Becca 0.64 EFB2_00477 Transcriptional regulator DauR 0.82 EFB2_04275 Cytosol aminopeptidase low > 86
Escherichia coli BL21 0.64 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.82 ECD_04126 multifunctional aminopeptidase A: a cyteinylglycinase, transcription regulator and site-specific recombination factor low > 61
Escherichia coli ECRC99 0.64 KEDOAH_10840 yheO Uncharacterized protein YheO 0.82 KEDOAH_16360 pepA leucyl aminopeptidase — —
Klebsiella michiganensis M5al 0.64 BWI76_RS25905 hypothetical protein 0.81 BWI76_RS03040 leucyl aminopeptidase low > 92
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.82 EX28DRAFT_3267 Leucyl aminopeptidase low > 76
Enterobacter sp. TBS_079 0.64 MPMX20_04239 Transcriptional regulator DauR 0.82 MPMX20_04118 Cytosol aminopeptidase low > 85
Shewanella sp. ANA-3 0.35 Shewana3_2973 YheO domain-containing protein (RefSeq) 0.81 Shewana3_3006 leucyl aminopeptidase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.35 SO1402 conserved hypothetical protein (NCBI ptt file) 0.81 SO1368 pepA-2 cytosol aminopeptidase (NCBI ptt file) low > 76
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU2206 conserved hypothetical protein (TIGR) 0.28 DVU0415 pepA cytosol aminopeptidase (TIGR) low > 55
Acinetobacter baumannii LAC-4 0.18 RR41_RS05440 PAS domain-containing protein 0.38 RR41_RS17825 leucyl aminopeptidase low > 55
Fusobacterium nucleatum SB010 0.17 HUW76_09955 PAS domain-containing protein 0.27 HUW76_01625 leucyl aminopeptidase low > 35
Pseudomonas sp. BP01 0.16 JOY50_RS24520 transcriptional regulator 0.52 JOY50_RS11265 leucyl aminopeptidase low > 84
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_04640 hypothetical protein 0.54 AO353_04535 aminopeptidase low > 101
Ralstonia solanacearum GMI1000 0.16 RS_RS24435 DNA-binding protein 0.47 RS_RS12120 cytosol aminopeptidase low > 80
Pseudomonas putida KT2440 0.16 PP_2931 conserved protein of unknown function 0.52 PP_0980 Probable cytosol aminopeptidase low > 96
Ralstonia solanacearum UW163 0.16 UW163_RS17980 DNA-binding protein 0.48 UW163_RS09120 leucyl aminopeptidase — —
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1693 YheO-like PAS domain 0.54 PfGW456L13_4846 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 87
Ralstonia solanacearum IBSBF1503 0.16 RALBFv3_RS16625 DNA-binding protein 0.48 RALBFv3_RS04550 leucyl aminopeptidase low > 76
Acidovorax sp. GW101-3H11 0.15 Ac3H11_38 YheO-like PAS domain 0.36 Ac3H11_2399 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 79
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_923 YheO-like PAS domain 0.54 Pf1N1B4_898 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 87
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS18565 PAS domain-containing protein 0.51 QEN71_RS25205 leucyl aminopeptidase low > 153
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS17665 PAS domain-containing protein 0.50 ABZR87_RS00150 leucyl aminopeptidase low > 80
Pseudomonas fluorescens SBW25 0.15 PFLU_RS13585 DNA-binding protein 0.54 PFLU_RS05235 leucyl aminopeptidase low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS13585 DNA-binding protein 0.54 PFLU_RS05235 leucyl aminopeptidase low > 109
Pseudomonas sp. SVBP6 0.15 COO64_RS25095 transcriptional regulator 0.51 COO64_RS04415 leucyl aminopeptidase low > 93
Pseudomonas aeruginosa MRSN321 0.15 DY961_RS13545 dauR;inference=COORDINATES transcriptional regulator DauR 0.52 DY961_RS13735 leucyl aminopeptidase low > 100
Pseudomonas simiae WCS417 0.15 PS417_12915 DNA-binding protein 0.54 PS417_05165 cytosol aminopeptidase low > 88
Pseudomonas aeruginosa PA14 0.15 IKLFDK_19905 Transcriptional regulator DauR 0.51 IKLFDK_19730 leucyl aminopeptidase low > 98
Pseudomonas aeruginosa PUPa3 0.15 DQ20_RS48840 dauR;inference=COORDINATES transcriptional regulator DauR 0.52 DQ20_RS49000 leucyl aminopeptidase low > 101
Pseudomonas sp. DMC3 0.15 GFF1929 Transcriptional regulator DauR 0.54 GFF1952 Cytosol aminopeptidase low > 89
Ralstonia solanacearum PSI07 0.15 RPSI07_RS06825 DNA-binding protein 0.49 RPSI07_RS12825 leucyl aminopeptidase low > 81
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_5396 YheO-like PAS domain 0.54 Pf6N2E2_5420 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 103
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS11120 DNA-binding protein 0.48 RR42_RS16225 cytosol aminopeptidase low > 128
Pseudomonas sp. S08-1 0.14 OH686_07030 YheO-like PAS domain 0.52 OH686_07810 Cytosol aminopeptidase PepA low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS01425 DNA-binding protein 0.46 HSERO_RS15600 cytosol aminopeptidase low > 78
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_17355 hypothetical protein 0.54 AO356_17470 aminopeptidase low > 104
Pseudomonas sp. RS175 0.13 PFR28_03547 Transcriptional regulator DauR 0.53 PFR28_03528 Cytosol aminopeptidase low > 88
Sinorhizobium meliloti 1021 0.13 SMc04327 hypothetical protein 0.28 SMc00585 leucyl aminopeptidase low > 103
Burkholderia phytofirmans PsJN 0.13 BPHYT_RS28105 hypothetical protein 0.51 BPHYT_RS04795 cytosol aminopeptidase — —
Paraburkholderia bryophila 376MFSha3.1 0.12 H281DRAFT_05884 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains 0.51 H281DRAFT_00123 aminopeptidase A. Metallo peptidase. MEROPS family M17 low > 103
Paraburkholderia graminis OAS925 0.12 ABIE53_005722 putative transcriptional regulator YheO 0.51 ABIE53_001235 leucyl aminopeptidase low > 113
Variovorax sp. SCN45 0.12 GFF2493 YheO-like PAS domain 0.36 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) low > 127

Not shown: 1 genomes with orthologs for CSW01_01875 only; 37 genomes with orthologs for CSW01_12680 only