Conservation of cofitness between CSW01_11550 and CSW01_11235 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11550 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 1.0 CSW01_11235 chemotaxis protein CheV 0.58 12
Shewanella amazonensis SB2B 0.73 Sama_1018 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) 0.62 Sama_2320 chemotaxis protein CheV (RefSeq) low > 62
Shewanella loihica PV-4 0.72 Shew_1189 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) 0.64 Shew_1343 response regulator receiver modulated CheW protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.71 Shewana3_1098 GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone 4-phosphate synthase (RefSeq) 0.63 Shewana3_1319 response regulator receiver modulated CheW protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.70 SO3467 ribBA 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative (NCBI ptt file) 0.63 SO3252 cheV-3 chemotaxis protein CheV (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.66 MIT1002_02698 Riboflavin biosynthesis protein RibBA 0.64 MIT1002_01037 Chemotaxis protein CheV — —
Marinobacter adhaerens HP15 0.56 HP15_493 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 0.54 HP15_1547 response regulator receiver modulated CheW protein — —
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_11420 ribB bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.41 OKGIIK_02645 Chemotaxis protein low > 53
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS04590 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.39 LRK54_RS13400 chemotaxis protein low > 59
Rhodanobacter denitrificans MT42 0.55 LRK55_RS04365 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.39 LRK55_RS13140 chemotaxis protein — —
Rhodanobacter sp000427505 FW510-R12 0.55 LRK53_RS05410 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.39 LRK53_RS15180 chemotaxis protein low > 59
Pseudomonas sp. BP01 0.54 JOY50_RS04730 ribBA bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.56 JOY50_RS00805 chemotaxis protein CheV low > 84
Pseudomonas putida KT2440 0.54 PP_3813 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 0.56 PP_4393 putative chemotaxis protein low > 96
Lysobacter sp. OAE881 0.53 ABIE51_RS04645 3,4-dihydroxy-2-butanone-4-phosphate synthase 0.43 ABIE51_RS16665 chemotaxis protein low > 62
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2402 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II 0.59 Psyr_3486 Response regulator receiver:CheW-like protein low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2402 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II 0.59 Psyr_3486 Response regulator receiver:CheW-like protein low > 86
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.4389.1 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) 0.46 Xcc-8004.2777.1 Chemotaxis protein CheV (EC 2.7.3.-) — —
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS27735 ribBA;go_function=GTP bifunctional 3 4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.58 DY961_RS00115 chemotaxis protein CheV low > 100
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS47910 ribBA;go_function=GTP bifunctional 3 4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.58 DQ20_RS40895 chemotaxis protein CheV low > 101
Pseudomonas aeruginosa PA14 0.52 IKLFDK_20900 bifunctional 3 4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.58 IKLFDK_17170 chemotaxis protein low > 98
Pseudomonas orientalis W4I3 0.52 QF045_RS13335 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.56 QF045_RS23665 chemotaxis protein CheV low > 93
Pseudomonas sp. DMC3 0.52 GFF3048 Riboflavin biosynthesis protein RibBA 0.57 GFF4852 Chemotaxis protein CheV low > 89
Pseudomonas fluorescens SBW25 0.51 PFLU_RS11510 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.57 PFLU_RS23190 chemotaxis protein CheV low > 109
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS11510 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.57 PFLU_RS23190 chemotaxis protein CheV low > 109
Pseudomonas sp. SVBP6 0.51 COO64_RS15880 ribBA bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.57 COO64_RS21410 chemotaxis protein CheV low > 93
Pseudomonas lactucae CFBP13502 0.51 GEMAOFIL_02480 Riboflavin biosynthesis protein RibBA 0.57 GEMAOFIL_04459 Chemotaxis protein CheV low > 96
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_1315 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) 0.57 PfGW456L13_1999 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas simiae WCS417 0.51 PS417_25255 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.57 PS417_21580 chemotaxis protein CheW — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25735 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.56 AO356_18905 chemotaxis protein CheW low > 104
Pseudomonas sp. S08-1 0.51 OH686_15705 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II 0.61 OH686_02985 Chemotaxis protein CheV low > 80
Pseudomonas stutzeri RCH2 0.50 Psest_3550 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.55 Psest_2970 Chemotaxis signal transduction protein low > 67
Pseudomonas segetis P6 0.50 ACVTMO_RS04915 ribBA bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.56 ACVTMO_RS15705 chemotaxis protein CheV low > 75
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS17900 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.31 HSERO_RS09765 chemotaxis protein CheV low > 78
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_2651 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) 0.57 Pf1N1B4_3470 Chemotaxis protein CheV (EC 2.7.3.-) low > 87
Pseudomonas sp. RS175 0.50 PFR28_03947 Riboflavin biosynthesis protein RibBA 0.56 PFR28_03256 Chemotaxis protein CheV low > 88
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_06705 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.56 AO353_02870 chemotaxis protein CheW — —
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4921 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC 4.1.99.12) / GTP cyclohydrolase II (EC 3.5.4.25) 0.56 Pf6N2E2_5692 Chemotaxis protein CheV (EC 2.7.3.-) low > 103
Castellaniella sp019104865 MT123 0.49 ABCV34_RS10135 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.29 ABCV34_RS04825 chemotaxis protein — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS08875 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.32 ABZR87_RS21330 chemotaxis protein low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS15565 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.31 RR42_RS27090 chemotaxis protein CheV low > 128
Dechlorosoma suillum PS 0.48 Dsui_0715 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.32 Dsui_1717 chemotaxis signal transduction protein — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS03290 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II 0.32 QEN71_RS38230 chemotaxis protein low > 153
Paraburkholderia graminis OAS925 0.47 ABIE53_003246 3,4-dihydroxy 2-butanone 4-phosphate synthase/GTP cyclohydrolase II 0.32 ABIE53_001701 two-component system chemotaxis response regulator CheV low > 113
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS15390 3,4-Dihydroxy-2-butanone 4-phosphate synthase 0.31 BPHYT_RS07045 chemotaxis protein CheV low > 109
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_04021 3,4-dihydroxy-2-butanone 4-phosphate synthase /GTP cyclohydrolase II 0.32 H281DRAFT_04914 CheW protein — —

Not shown: 45 genomes with orthologs for CSW01_11550 only; 12 genomes with orthologs for CSW01_11235 only