Conservation of cofitness between CSW01_03020 and CSW01_10590 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03020 serine endoprotease DegQ 1.0 CSW01_10590 flagellar biosynthetic protein FliQ 0.68 3
Dickeya dadantii 3937 0.63 DDA3937_RS01605 serine endoprotease DegQ 0.37 DDA3937_RS13420 flagellar biosynthesis protein FliQ low > 74
Shewanella amazonensis SB2B 0.63 Sama_3073 serine protease (RefSeq) 0.66 Sama_2286 flagellar biosynthetic protein FliQ (RefSeq) low > 62
Serratia liquefaciens MT49 0.63 IAI46_22390 serine endoprotease DegQ 0.34 IAI46_15895 flagellar biosynthesis protein FliQ low > 87
Dickeya dianthicola 67-19 0.63 HGI48_RS01520 serine endoprotease DegQ 0.37 HGI48_RS13465 flagellar biosynthesis protein FliQ low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS01585 serine endoprotease DegQ 0.37 DZA65_RS13950 flagellar biosynthesis protein FliQ low > 75
Pectobacterium carotovorum WPP14 0.62 HER17_RS19985 serine endoprotease DegQ 0.27 HER17_RS08225 flagellar biosynthesis protein FliQ low > 75
Shewanella oneidensis MR-1 0.60 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) 0.71 SO3217 fliQ flagellar biosynthetic protein FliQ (NCBI ptt file) — —
Shewanella sp. ANA-3 0.60 Shewana3_0690 peptidase Do (RefSeq) 0.71 Shewana3_1353 flagellar biosynthetic protein FliQ (RefSeq) — —
Shewanella loihica PV-4 0.60 Shew_3296 protease Do (RefSeq) 0.50 Shew_1377 flagellar biosynthetic protein FliQ (RefSeq) — —
Alteromonas macleodii MIT1002 0.59 MIT1002_00842 Periplasmic pH-dependent serine endoprotease DegQ precursor 0.68 MIT1002_01096 Flagellar biosynthetic protein FliQ low > 70
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2974 Outer membrane stress sensor protease DegQ, serine protease 0.34 GFF4007 Flagellar biosynthesis protein FliQ low > 78
Pantoea sp. MT58 0.57 IAI47_17260 serine endoprotease DegQ 0.32 IAI47_07975 flagellar biosynthesis protein FliQ low > 76
Enterobacter sp. TBS_079 0.57 MPMX20_04138 Periplasmic pH-dependent serine endoprotease DegQ 0.38 MPMX20_02946 Flagellar biosynthetic protein FliQ low > 85
Pantoea agglomerans CFBP13505 P0401 0.57 PagCFBP13505_RS09425 serine endoprotease DegQ 0.32 PagCFBP13505_RS01885 flagellar biosynthesis protein FliQ low > 74
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3283 periplasmic serine protease, Do/DeqQ family 0.38 EX28DRAFT_0605 flagellar biosynthetic protein FliQ low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_00470 Periplasmic pH-dependent serine endoprotease DegQ 0.31 OHPLBJKB_01780 hypothetical protein low > 74
Escherichia coli ECRC62 0.57 BNILDI_01930 degQ serine endoprotease DegQ 0.31 BNILDI_15080 fliQ flagellar biosynthesis protein FliQ 0.49 33
Escherichia coli Nissle 1917 0.57 ECOLIN_RS18545 serine endoprotease DegQ 0.31 ECOLIN_RS11115 flagellar biosynthesis protein FliQ — —
Escherichia coli BW25113 0.57 b3234 degQ serine endoprotease, periplasmic (NCBI) 0.31 b1949 fliQ flagellar biosynthesis protein Q (NCBI) low > 76
Escherichia coli ECOR27 0.57 NOLOHH_09605 degQ serine endoprotease DegQ 0.31 NOLOHH_16290 fliQ flagellar biosynthesis protein FliQ low > 76
Escherichia fergusonii Becca 0.57 EFB2_00596 Periplasmic pH-dependent serine endoprotease DegQ 0.31 EFB2_01997 Flagellar biosynthetic protein FliQ low > 86
Escherichia coli ECRC101 0.57 MCAODC_08325 degQ serine endoprotease DegQ 0.31 MCAODC_19735 fliQ flagellar biosynthesis protein FliQ — —
Escherichia coli ECRC99 0.57 KEDOAH_10345 degQ serine endoprotease DegQ 0.31 KEDOAH_02435 fliQ flagellar biosynthesis protein FliQ — —
Escherichia coli ECRC100 0.57 OKFHMN_17805 degQ serine endoprotease DegQ 0.31 OKFHMN_25660 fliQ flagellar biosynthesis protein FliQ — —
Escherichia coli ECRC98 0.57 JDDGAC_21430 degQ serine endoprotease DegQ 0.31 JDDGAC_00245 fliQ flagellar biosynthesis protein FliQ low > 87
Escherichia coli ECOR38 0.57 HEPCGN_16675 degQ serine endoprotease DegQ 0.31 HEPCGN_04020 fliQ flagellar biosynthesis protein FliQ low > 88
Escherichia coli ECRC102 0.57 NIAGMN_15565 degQ serine endoprotease DegQ 0.31 NIAGMN_02395 fliQ flagellar biosynthesis protein FliQ — —
Rahnella sp. WP5 0.56 EX31_RS12475 Do family serine endopeptidase 0.35 EX31_RS09595 flagellar biosynthesis protein FliQ — —
Erwinia tracheiphila SCR3 0.54 LU632_RS21355 Do family serine endopeptidase 0.32 LU632_RS10520 fliQ flagellar biosynthesis protein FliQ low > 73
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_13665 serine endoprotease DegQ 0.32 IJEDHG_21180 fliQ flagellar biosynthesis protein FliQ low > 61
Erwinia amylovora T8 0.52 OLJFJH_00660 serine endoprotease DegP 0.32 OLJFJH_15410 flagellar biosynthesis protein FliQ low > 58
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS17545 DegQ family serine endoprotease 0.35 ABZR86_RS20235 flagellar biosynthesis protein FliQ low > 74
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_00150 Periplasmic serine endoprotease DegP-like 0.36 OKGIIK_02800 fliQ flagellar biosynthesis protein FliQ low > 53
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS06430 Do family serine endopeptidase 0.36 LRK54_RS13550 flagellar biosynthesis protein FliQ low > 59
Rhodanobacter denitrificans MT42 0.37 LRK55_RS06175 Do family serine endopeptidase 0.36 LRK55_RS13290 flagellar biosynthesis protein FliQ low > 63
Rhodanobacter sp000427505 FW510-R12 0.37 LRK53_RS17720 Do family serine endopeptidase 0.30 LRK53_RS15025 flagellar biosynthesis protein FliQ low > 59
Methylophilus sp. DMC18 0.30 GFF1457 Periplasmic pH-dependent serine endoprotease DegQ 0.44 GFF551 Flagellar biosynthetic protein FliQ low > 43
Pseudomonas aeruginosa PA14 0.29 IKLFDK_03285 serine protease MucD 0.57 IKLFDK_06880 flagellar biosynthetic protein FliQ low > 98
Dinoroseobacter shibae DFL-12 0.29 Dshi_2733 protease Do (RefSeq) 0.31 Dshi_3250 export protein FliQ family 3 (RefSeq) low > 64
Pseudomonas aeruginosa PUPa3 0.29 DQ20_RS44180 mucD;inference=COORDINATES serine protease MucD 0.57 DQ20_RS47115 fliQ;go_component=bacterial-type flagellar biosynthesis protein FliQ low > 101
Pseudomonas aeruginosa MRSN321 0.29 DY961_RS08670 mucD;inference=COORDINATES serine protease MucD 0.57 DY961_RS05675 fliQ;go_component=bacterial-type flagellar biosynthesis protein FliQ low > 100
Dechlorosoma suillum PS 0.29 Dsui_1606 periplasmic serine protease, Do/DeqQ family 0.35 Dsui_1745 flagellar biosynthetic protein FliQ low > 51
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS07245 DegQ family serine endoprotease 0.58 PFLU_RS21705 flagellar biosynthesis protein FliQ low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS07245 DegQ family serine endoprotease 0.58 PFLU_RS21705 flagellar biosynthesis protein FliQ low > 109
Pseudomonas orientalis W4I3 0.29 QF045_RS09850 DegQ family serine endoprotease 0.59 QF045_RS21865 flagellar biosynthesis protein FliQ low > 93
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_4513 HtrA protease/chaperone protein 0.59 PfGW456L13_4338 Flagellar biosynthesis protein FliQ low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_17640 serine peptidase 0.57 AO353_18750 flagellar biosynthetic protein FliQ low > 101
Marinobacter adhaerens HP15 0.28 HP15_779 serine protease MucD precursor 0.51 HP15_2311 flagellar biosynthetic protein FliQ low > 73
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS21975 peptidase 0.35 HSERO_RS10255 flagellar biosynthesis protein FliQ low > 78
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3326 HtrA protease/chaperone protein 0.59 Pf1N1B4_3619 Flagellar biosynthesis protein FliQ — —
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_01575 Periplasmic serine endoprotease DegP 0.58 GEMAOFIL_04145 Flagellar biosynthetic protein FliQ low > 96
Pseudomonas stutzeri RCH2 0.28 Psest_3096 periplasmic serine protease, Do/DeqQ family 0.58 Psest_1733 flagellar biosynthetic protein FliQ — —
Pseudomonas segetis P6 0.28 ACVTMO_RS06960 DegQ family serine endoprotease 0.58 ACVTMO_RS15520 fliQ flagellar biosynthesis protein FliQ low > 75
Sphingomonas koreensis DSMZ 15582 0.28 Ga0059261_1382 periplasmic serine protease, Do/DeqQ family 0.42 Ga0059261_2061 flagellar biosynthetic protein FliQ — —
Pseudomonas sp. DMC3 0.28 GFF2280 Periplasmic serine endoprotease DegP 0.56 GFF2464 Flagellar biosynthetic protein FliQ low > 89
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2753 HtrA protease/chaperone protein 0.59 Pf6N2E2_2579 Flagellar biosynthesis protein FliQ low > 103
Pseudomonas sp. SVBP6 0.28 COO64_RS16540 DegQ family serine endoprotease 0.59 COO64_RS21210 fliQ flagellar biosynthesis protein FliQ low > 93
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_04560 serine peptidase 0.59 AO356_03765 flagellar biosynthetic protein FliQ low > 104
Pseudomonas putida KT2440 0.28 PP_1430 putative periplasmic serine endoprotease DegP-like 0.59 PP_4354 flagellar export apparatus subunit low > 96
Pseudomonas simiae WCS417 0.28 PS417_07135 serine peptidase 0.58 PS417_19735 flagellar biosynthesis protein FliQ — —
Pseudomonas sp. BP01 0.28 JOY50_RS14680 DegQ family serine endoprotease 0.59 JOY50_RS00615 fliQ flagellar biosynthesis protein FliQ low > 84
Sphingobium sp. HT1-2 0.27 GFF2902 HtrA protease/chaperone protein 0.40 GFF3739 Flagellar biosynthesis protein FliQ low > 95
Phaeobacter inhibens DSM 17395 0.27 PGA1_c23690 protease do 0.31 PGA1_c35800 flagellar biosynthetic protein FliQ low > 62
Pseudomonas sp. S08-1 0.27 OH686_20060 HtrA protease/chaperone protein 0.59 OH686_02765 flagellar biosynthetic protein FliQ low > 80

Not shown: 28 genomes with orthologs for CSW01_03020 only; 14 genomes with orthologs for CSW01_10590 only