Conservation of cofitness between CSW01_00110 and CSW01_08760 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00110 hypothetical protein 1.0 CSW01_08760 NAD-dependent succinate-semialdehyde dehydrogenase 0.66 2
Shewanella loihica PV-4 0.53 Shew_3189 hypothetical protein (RefSeq) 0.48 Shew_3173 succinic semialdehyde dehydrogenase (RefSeq) 0.87 45
Pseudomonas sp. S08-1 0.53 OH686_06355 Putative transmembrane protein 0.57 OH686_11875 Succinate-semialdehyde dehydrogenase [NAD(P)+] — —
Paraburkholderia graminis OAS925 0.51 ABIE53_003214 putative Ca2+/H+ antiporter (TMEM165/GDT1 family) 0.52 ABIE53_004715 succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS15065 TMEM165/GDT1 family protein 0.55 ABZR87_RS05195 NAD-dependent succinate-semialdehyde dehydrogenase low > 80
Shewanella oneidensis MR-1 0.51 SO1071 conserved hypothetical protein (NCBI ptt file) 0.56 SO1275 gabD succinate-semialdehyde dehydrogenase (NADP+) [EC: 1.2.1.16] (from data) low > 76
Ralstonia solanacearum PSI07 0.50 RPSI07_RS14145 UPF0016 domain-containing protein 0.55 RPSI07_RS23810 NAD-dependent succinate-semialdehyde dehydrogenase — —
Shewanella sp. ANA-3 0.50 Shewana3_0909 hypothetical protein (RefSeq) 0.56 Shewana3_3092 succinate semialdehyde dehydrogenase (RefSeq) low > 73
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS10120 membrane protein 0.54 BPHYT_RS34305 succinate-semialdehyde dehydrogenase low > 109
Ralstonia solanacearum GMI1000 0.50 RS_RS10535 UPF0016 domain-containing protein 0.54 RS_RS00140 NAD-dependent succinate-semialdehyde dehydrogenase — —
Ralstonia solanacearum UW163 0.50 UW163_RS10560 UPF0016 domain-containing protein 0.55 UW163_RS04040 NAD-dependent succinate-semialdehyde dehydrogenase — —
Dechlorosoma suillum PS 0.50 Dsui_3069 putative membrane protein 0.54 Dsui_0437 succinate-semialdehyde dehydrogenase low > 51
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS03165 UPF0016 domain-containing protein 0.55 RALBFv3_RS09540 NAD-dependent succinate-semialdehyde dehydrogenase — —
Pseudomonas simiae WCS417 0.49 PS417_04520 membrane protein 0.56 PS417_00895 succinate-semialdehyde dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03986 Putative Ca2+/H+ antiporter, TMEM165/GDT1 family 0.55 H281DRAFT_03540 succinate semialdehyde dehydrogenase (EC 1.2.1.16) low > 103
Shewanella amazonensis SB2B 0.49 Sama_2940 hypothetical protein (RefSeq) 0.53 Sama_2637 succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq) low > 62
Acidovorax sp. GW101-3H11 0.49 Ac3H11_4276 Probable transmembrane protein 0.55 Ac3H11_1480 Aldehyde dehydrogenase B (EC 1.2.1.22) low > 79
Magnetospirillum magneticum AMB-1 0.49 AMB_RS12405 UPF0016 domain-containing protein 0.54 AMB_RS06710 NAD-dependent succinate-semialdehyde dehydrogenase low > 64
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF5195 Probable transmembrane protein 0.50 GFF1556 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) — —
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_3248 Probable transmembrane protein 0.57 Pf6N2E2_4014 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 103
Pseudomonas fluorescens SBW25 0.49 PFLU_RS04565 TMEM165/GDT1 family protein 0.56 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase low > 109
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0985 Protein of unknown function UPF0016 0.57 Psyr_0091 succinate semialdehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0985 Protein of unknown function UPF0016 0.57 Psyr_0091 succinate semialdehyde dehydrogenase low > 86
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS04565 TMEM165/GDT1 family protein 0.56 PFLU_RS00910 NADP-dependent succinate-semialdehyde dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_14990 hypothetical protein 0.56 AO353_11505 succinate-semialdehyde dehydrogenase (EC 1.2.1.16) (from data) low > 101
Caulobacter crescentus NA1000 0.48 CCNA_02455 conserved integral membrane protein 0.52 CCNA_03242 succinic semialdehyde dehydrogenase low > 66
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_06945 hypothetical protein 0.56 AO356_10720 succinate-semialdehyde dehydrogenase — —
Pseudomonas sp. RS175 0.48 PFR28_03624 Putative manganese exporter 0.57 PFR28_04755 Glutarate-semialdehyde dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_2952 Probable transmembrane protein 0.56 Pf1N1B4_1734 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) — —
Variovorax sp. OAS795 0.48 ABID97_RS02605 TMEM165/GDT1 family protein 0.54 ABID97_RS11235 NAD-dependent succinate-semialdehyde dehydrogenase low > 91
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1615 Probable transmembrane protein 0.57 PfGW456L13_495 Glutarate-semialdehyde dehydrogenase (EC 1.2.1.20) (from data) low > 87
Pseudomonas aeruginosa PA14 0.48 IKLFDK_00360 Uncharacterized protein family UPF0016 0.57 IKLFDK_24135 NADP-dependent succinate-semialdehyde dehydrogenase low > 101
Acinetobacter radioresistens SK82 0.48 MPMX26_02923 Putative manganese exporter 0.54 MPMX26_01991 Glutarate-semialdehyde dehydrogenase low > 36
Pseudomonas stutzeri RCH2 0.48 Psest_3226 Predicted membrane protein 0.57 Psest_3654 succinate-semialdehyde dehydrogenase low > 67
Caulobacter crescentus NA1000 Δfur 0.48 CCNA_02455 conserved integral membrane protein 0.52 CCNA_03242 succinic semialdehyde dehydrogenase low > 67
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS03795 TMEM165/GDT1 family protein 0.55 QEN71_RS17165 NAD-dependent succinate-semialdehyde dehydrogenase — —
Pseudomonas sp. BP01 0.48 JOY50_RS19450 TMEM165/GDT1 family protein 0.56 JOY50_RS18515 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 84
Pseudomonas sp. DMC3 0.48 GFF4456 Putative manganese exporter 0.56 GFF4256 Glutarate-semialdehyde dehydrogenase low > 89
Pseudomonas putida KT2440 0.48 PP_0760 conserved membrane protein of unknown function 0.56 PP_0213 succinate-semialdehyde dehydrogenase (NADP+) low > 96
Variovorax sp. SCN45 0.47 GFF3266 Putative transmembrane protein 0.53 GFF5612 Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16) low > 127
Castellaniella sp019104865 MT123 0.47 ABCV34_RS03705 TMEM165/GDT1 family protein 0.56 ABCV34_RS09380 NADP-dependent succinate-semialdehyde dehydrogenase low > 48
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_4060 Predicted membrane protein 0.27 Ga0059261_1680 NAD-dependent aldehyde dehydrogenases low > 68
Pseudomonas sp. SVBP6 0.46 COO64_RS03370 TMEM165/GDT1 family protein 0.56 COO64_RS12475 gabD NADP-dependent succinate-semialdehyde dehydrogenase low > 93
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS33355 membrane protein 0.57 RR42_RS21375 succinate-semialdehyde dehydrogenase low > 128
Marinobacter adhaerens HP15 0.44 HP15_3823 uncharacterized protein family UPF0016-like protein 0.53 HP15_2020 succinate-semialdehyde dehydrogenase I low > 73

Not shown: 2 genomes with orthologs for CSW01_00110 only; 51 genomes with orthologs for CSW01_08760 only