| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07225 | | cytochrome-c oxidase, cbb3-type subunit II | 1.0 | CSW01_06950 | | ATP-dependent RNA helicase HrpA | 0.43 | 8 |
| Alteromonas macleodii MIT1002 | 0.77 | MIT1002_02130 | | cbb3-type cytochrome c oxidase subunit II | 0.55 | MIT1002_01685 | | ATP-dependent RNA helicase HrpB | low | > 70 |
| Shewanella amazonensis SB2B | 0.76 | Sama_1792 | | cytochrome c oxidase, cbb3-type, subunit II (RefSeq) | 0.57 | Sama_1619 | | ATP-dependent helicase HrpA (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.74 | SO2363 | ccoO | cytochrome c oxidase, cbb3-type, subunit II (NCBI ptt file) | 0.57 | SO2229 | hrpA | ATP-dependent helicase HrpA (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.74 | Shew_1986 | | cytochrome c oxidase, cbb3-type, subunit II (RefSeq) | 0.57 | Shew_1767 | | ATP-dependent helicase HrpA (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.74 | Shewana3_2108 | | cytochrome c oxidase, cbb3-type, subunit II (RefSeq) | 0.57 | Shewana3_1897 | | ATP-dependent helicase HrpA (RefSeq) | — | — |
| Pseudomonas aeruginosa PA14 | 0.71 | IKLFDK_07425 | | cytochrome-c oxidase cbb3-type subunit II | 0.45 | IKLFDK_16885 | | ATP-dependent RNA helicase HrpA | low | > 100 |
| Kangiella aquimarina DSM 16071 | 0.70 | B158DRAFT_1967 | | cytochrome c oxidase, cbb3-type, subunit II | 0.38 | B158DRAFT_1779 | | ATP-dependent helicase HrpA | low | > 40 |
| Pseudomonas stutzeri RCH2 | 0.70 | Psest_2528 | | cytochrome c oxidase, cbb3-type, subunit II | 0.43 | Psest_1339 | | ATP-dependent helicase HrpA | — | — |
| Pseudomonas sp. S08-1 | 0.69 | OH686_02195 | | cytochrome c oxidase, cbb3-type, subunit II | 0.43 | OH686_05730 | | RNA helicase HrpA | low | > 80 |
| Pseudomonas fluorescens FW300-N2E3 | 0.69 | AO353_00590 | | cytochrome C oxidase Cbb3 | 0.45 | AO353_18225 | | ATP-dependent RNA helicase HrpA | low | > 101 |
| Pseudomonas sp. SVBP6 | 0.69 | COO64_RS18685 | ccoO | cytochrome-c oxidase, cbb3-type subunit II | 0.45 | COO64_RS22000 | hrpA | ATP-dependent RNA helicase HrpA | low | > 93 |
| Pseudomonas putida KT2440 | 0.69 | PP_4251 | | cytochrome c oxidase subunit, cbb3-type | 0.44 | PP_4546 | | ATP-dependent helicase HrpA | low | > 96 |
| Pseudomonas sp. BP01 | 0.69 | JOY50_RS00060 | ccoO | cytochrome-c oxidase, cbb3-type subunit II | 0.44 | JOY50_RS01295 | hrpA | ATP-dependent RNA helicase HrpA | low | > 84 |
| Pseudomonas segetis P6 | 0.69 | MPMX49_02313 | | hypothetical protein | 0.43 | MPMX49_03273 | | hypothetical protein | — | — |
| Pseudomonas sp. DMC3 | 0.68 | GFF728 | | hypothetical protein | 0.45 | GFF2341 | | hypothetical protein | low | > 89 |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_2311 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.45 | Pf6N2E2_2694 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_02430 | | cytochrome C oxidase Cbb3 | 0.45 | AO356_04280 | | ATP-dependent RNA helicase HrpA | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_4062 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.45 | PfGW456L13_4467 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_3878 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.45 | Pf1N1B4_3388 | | ATP-dependent RNA helicase HrpA (EC 3.6.4.13) | low | > 87 |
| Pseudomonas sp. RS175 | 0.67 | PFR28_01090 | | hypothetical protein | 0.44 | PFR28_00739 | | hypothetical protein | low | > 88 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_20725 | | cbb3-type cytochrome c oxidase subunit II | 0.44 | PS417_20575 | | ATP-dependent helicase HrpA | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS22345 | | cytochrome-c oxidase, cbb3-type subunit II | 0.45 | PFLU_RS22265 | | ATP-dependent RNA helicase HrpA | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.66 | GEMAOFIL_04290 | | hypothetical protein | 0.45 | GEMAOFIL_04265 | | hypothetical protein | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS22345 | | cytochrome-c oxidase, cbb3-type subunit II | 0.45 | PFLU_RS22265 | | ATP-dependent RNA helicase HrpA | low | > 109 |
| Acidovorax sp. GW101-3H11 | 0.64 | Ac3H11_969 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.38 | Ac3H11_896 | | macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. | low | > 79 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.64 | GFF4136 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.37 | GFF4301 | | macromolecule metabolism; macromolecule synthesis, modification; dna - replication, repair, restr./modif. | low | > 90 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_2108 | | cytochrome c oxidase, cbb3-type, subunit II | 0.44 | HP15_1863 | | RNA helicase, ATP-dependent DEAH box, HrpA type | — | — |
| Variovorax sp. OAS795 | 0.63 | ABID97_RS16220 | | cytochrome-c oxidase, cbb3-type subunit II | 0.39 | ABID97_RS16615 | | ATP-dependent RNA helicase HrpA | low | > 91 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_3414 | | Cytochrome C oxidase, mono-heme subunit/FixO | 0.44 | Psyr_3831 | | ATP-dependent helicase HrpA | — | — |
| Ralstonia solanacearum UW163 | 0.62 | UW163_RS13080 | | cytochrome-c oxidase, cbb3-type subunit II | 0.41 | UW163_RS12950 | | ATP-dependent RNA helicase HrpA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.62 | RALBFv3_RS15620 | | cytochrome-c oxidase, cbb3-type subunit II | 0.41 | RALBFv3_RS15490 | | ATP-dependent RNA helicase HrpA | low | > 76 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_3414 | | Cytochrome C oxidase, mono-heme subunit/FixO | 0.44 | Psyr_3831 | | ATP-dependent helicase HrpA | — | — |
| Methylophilus sp. DMC18 | 0.62 | GFF1083 | | hypothetical protein | 0.43 | GFF1094 | | hypothetical protein | — | — |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS11150 | | cytochrome-c oxidase, cbb3-type subunit II | 0.40 | ABZR87_RS11020 | | ATP-dependent RNA helicase HrpA | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.62 | RPSI07_RS17735 | | cytochrome-c oxidase, cbb3-type subunit II | 0.41 | RPSI07_RS17865 | | ATP-dependent RNA helicase HrpA | low | > 81 |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS06865 | | cytochrome-c oxidase, cbb3-type subunit II | 0.39 | ABCV34_RS02420 | | ATP-dependent RNA helicase HrpA | low | > 48 |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS06400 | | cytochrome-c oxidase, cbb3-type subunit II | 0.41 | RS_RS06270 | | ATP-dependent RNA helicase HrpA | low | > 80 |
| Lysobacter sp. OAE881 | 0.61 | ABIE51_RS03850 | | cytochrome-c oxidase, cbb3-type subunit II | 0.36 | ABIE51_RS05155 | | ATP-dependent RNA helicase HrpA | low | > 62 |
| Dechlorosoma suillum PS | 0.60 | Dsui_1628 | | cytochrome c oxidase, cbb3-type, subunit II | 0.40 | Dsui_1373 | | ATP-dependent helicase HrpA | — | — |
| Herbaspirillum seropedicae SmR1 | 0.59 | HSERO_RS16050 | | peptidase S41 | 0.40 | HSERO_RS17315 | | ATP-dependent helicase | low | > 78 |
| Variovorax sp. SCN45 | 0.59 | GFF6963 | | Cytochrome c oxidase (cbb3-type) subunit CcoO (EC 1.9.3.1) | 0.39 | GFF247 | | ATP-dependent helicase HrpA | low | > 127 |
| Cupriavidus basilensis FW507-4G11 | 0.57 | RR42_RS12905 | | peptidase S41 | 0.41 | RR42_RS13030 | | ATP-dependent helicase | low | > 128 |
| Rhodanobacter sp000427505 FW510-R12 | 0.57 | LRK53_RS11785 | | cytochrome-c oxidase, cbb3-type subunit II | 0.36 | LRK53_RS15885 | | ATP-dependent RNA helicase HrpA | — | — |
| Rhodanobacter denitrificans MT42 | 0.57 | LRK55_RS17450 | | cytochrome-c oxidase, cbb3-type subunit II | 0.34 | LRK55_RS12420 | | ATP-dependent RNA helicase HrpA | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.57 | LRK54_RS17225 | | cytochrome-c oxidase, cbb3-type subunit II | 0.34 | LRK54_RS12715 | | ATP-dependent RNA helicase HrpA | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_07660 | ccoO | cytochrome-c oxidase, cbb3-type subunit II | 0.33 | OKGIIK_02155 | hrpA | ATP-dependent RNA helicase HrpA | low | > 53 |
| Dyella japonica UNC79MFTsu3.2 | 0.54 | ABZR86_RS04445 | | cytochrome-c oxidase, cbb3-type subunit II | 0.37 | ABZR86_RS19720 | | ATP-dependent RNA helicase HrpA | low | > 74 |
Not shown: 15 genomes with orthologs for CSW01_07225 only; 34 genomes with orthologs for CSW01_06950 only