Conservation of cofitness between CSW01_11360 and CSW01_06080 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11360 class II glutamine amidotransferase 1.0 CSW01_06080 histidine ammonia-lyase 0.42 20
Serratia liquefaciens MT49 0.68 IAI46_04345 class II glutamine amidotransferase 0.72 IAI46_03660 histidine ammonia-lyase low > 87
Erwinia amylovora T8 0.68 OLJFJH_18450 class II glutamine amidotransferase 0.55 OLJFJH_16540 histidine ammonia-lyase low > 58
Dickeya dianthicola 67-19 0.68 HGI48_RS16655 class II glutamine amidotransferase 0.54 HGI48_RS15090 histidine ammonia-lyase low > 71
Dickeya dianthicola ME23 0.68 DZA65_RS17745 class II glutamine amidotransferase 0.54 DZA65_RS15835 histidine ammonia-lyase low > 75
Dickeya dadantii 3937 0.67 DDA3937_RS16585 class II glutamine amidotransferase 0.54 DDA3937_RS14995 histidine ammonia-lyase low > 74
Rahnella sp. WP5 0.67 EX31_RS21015 class II glutamine amidotransferase 0.56 EX31_RS06755 histidine ammonia-lyase low > 89
Enterobacter sp. TBS_079 0.67 MPMX20_00912 Putative glutamine amidotransferase YafJ 0.70 MPMX20_01400 Histidine ammonia-lyase low > 85
Enterobacter asburiae PDN3 0.67 EX28DRAFT_2666 Predicted glutamine amidotransferase 0.71 EX28DRAFT_2219 histidine ammonia-lyase (EC 4.3.1.3) low > 76
Escherichia coli ECOR38 0.66 HEPCGN_07875 yafJ Putative glutamine amidotransferase YafJ 0.21 HEPCGN_01360 histidine ammonia-lyase low > 88
Klebsiella michiganensis M5al 0.66 BWI76_RS05480 class II glutamine amidotransferase 0.69 BWI76_RS08740 Histidine ammonia-lyase (EC 4.3.1.3) (from data) low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF4102 Predicted glutamine amidotransferase 0.68 GFF668 Histidine ammonia-lyase (EC 4.3.1.3) 0.30 64
Klebsiella pneumoniae MKP103 0.65 KDGMDA_13740 class II glutamine amidotransferase 0.69 KDGMDA_17005 histidine ammonia-lyase low > 95
Pantoea sp. MT58 0.65 IAI47_15185 class II glutamine amidotransferase 0.53 IAI47_13275 histidine ammonia-lyase low > 76
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS09980 class II glutamine amidotransferase 0.53 PagCFBP13505_RS04045 histidine ammonia-lyase low > 74
Shewanella sp. ANA-3 0.60 Shewana3_2322 glutamine amidotransferase, class-II (RefSeq) 0.74 Shewana3_0101 histidine ammonia-lyase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.60 SO2535 hypothetical amidotransferase (NCBI ptt file) 0.74 SO0098 hutH histidine ammonia-lyase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.59 Shew_2107 glutamine amidotransferase, class-II (RefSeq) 0.73 Shew_3756 histidine ammonia-lyase (RefSeq) — —
Azospirillum sp. SherDot2 0.59 MPMX19_00595 Putative glutamine amidotransferase YafJ 0.53 MPMX19_04940 Histidine ammonia-lyase low > 112
Shewanella amazonensis SB2B 0.58 Sama_1869 amidotransferase (RefSeq) 0.38 Sama_1631 Histidine ammonia-lyase (EC 4.3.1.3) (from data) low > 62
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2711 Glutamine amidotransferase, class-II 0.69 Pf6N2E2_3799 Histidine ammonia-lyase (EC 4.3.1.3) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_04350 glutamine amidotransferase 0.69 AO356_09600 histidine ammonia-lyase low > 104
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_4482 Glutamine amidotransferase, class-II 0.69 PfGW456L13_320 Histidine ammonia-lyase (EC 4.3.1.3) (from data) low > 87
Pseudomonas sp. RS175 0.55 PFR28_00725 Putative glutamine amidotransferase YafJ 0.69 PFR28_04971 Histidine ammonia-lyase low > 88
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_01624 Putative glutamine amidotransferase YafJ 0.70 GEMAOFIL_00574 Histidine ammonia-lyase low > 96
Pseudomonas fluorescens SBW25 0.55 PFLU_RS07540 class II glutamine amidotransferase 0.70 PFLU_RS01805 histidine ammonia-lyase low > 109
Pseudomonas orientalis W4I3 0.55 QF045_RS10105 class II glutamine amidotransferase 0.70 QF045_RS04815 histidine ammonia-lyase low > 93
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS07540 class II glutamine amidotransferase 0.70 PFLU_RS01805 histidine ammonia-lyase low > 109
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_3359 Glutamine amidotransferase, class-II 0.69 Pf1N1B4_1581 Histidine ammonia-lyase (EC 4.3.1.3) — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_1576 Glutamine amidotransferase, class-II 0.69 Psyr_4833 histidine ammonia-lyase low > 86
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_17960 glutamine amidotransferase 0.69 AO353_12270 histidine ammonia-lyase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_1576 Glutamine amidotransferase, class-II 0.69 Psyr_4833 histidine ammonia-lyase low > 86
Pseudomonas sp. DMC3 0.55 GFF2323 Putative glutamine amidotransferase YafJ 0.70 GFF4056 Histidine ammonia-lyase low > 89
Pseudomonas simiae WCS417 0.55 PS417_07455 glutamine amidotransferase 0.71 PS417_01750 histidine ammonia-lyase low > 88
Pseudomonas sp. SVBP6 0.54 COO64_RS22265 class II glutamine amidotransferase 0.68 COO64_RS13415 hutH histidine ammonia-lyase low > 93
Pseudomonas putida KT2440 0.53 PP_4581 putative amidotransferase 0.70 PP_5032 Histidine ammonia-lyase low > 96
Pseudomonas sp. BP01 0.53 JOY50_RS01470 class II glutamine amidotransferase 0.70 JOY50_RS09525 hutH histidine ammonia-lyase low > 84
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS53010 class II glutamine amidotransferase 0.69 DQ20_RS50780 hutH;go_function=histidine histidine ammonia-lyase low > 101
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS18870 class II glutamine amidotransferase 0.69 DY961_RS11315 hutH;go_function=histidine histidine ammonia-lyase low > 100
Pseudomonas aeruginosa PA14 0.52 IKLFDK_06205 class II glutamine amidotransferase 0.69 IKLFDK_28030 histidine ammonia-lyase low > 98
Pseudomonas sp. S08-1 0.52 OH686_05255 Putative glutamine amidotransferase YafJ 0.70 OH686_16755 histidine ammonia-lyase low > 80
Pseudomonas segetis P6 0.52 MPMX49_02977 Putative glutamine amidotransferase YafJ 0.70 MPMX49_03960 Histidine ammonia-lyase low > 75
Pseudomonas stutzeri RCH2 0.51 Psest_1849 Predicted glutamine amidotransferase 0.22 Psest_3695 Histidine ammonia-lyase low > 67
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS24040 glutamine amidotransferase 0.29 HSERO_RS22680 histidine ammonia-lyase low > 78
Paraburkholderia graminis OAS925 0.47 ABIE53_003506 putative glutamine amidotransferase 0.58 ABIE53_001729 histidine ammonia-lyase low > 113
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS26860 class II glutamine amidotransferase 0.60 QEN71_RS23515 histidine ammonia-lyase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_04266 glutamine amidotransferase 0.58 H281DRAFT_04873 histidine ammonia-lyase low > 103
Variovorax sp. OAS795 0.46 ABID97_RS04635 class II glutamine amidotransferase 0.54 ABID97_RS03420 histidine ammonia-lyase low > 91
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS16680 glutamine amidotransferase 0.58 BPHYT_RS07555 Histidine ammonia-lyase (EC 4.3.1.3) (from data) low > 109
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS02595 glutamine amidotransferase 0.70 RR42_RS14640 histidine ammonia-lyase low > 128
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS07540 class II glutamine amidotransferase 0.56 ABZR87_RS01025 histidine ammonia-lyase low > 80
Ralstonia solanacearum PSI07 0.44 RPSI07_RS21635 class II glutamine amidotransferase 0.55 RPSI07_RS11915 histidine ammonia-lyase low > 81
Ralstonia solanacearum UW163 0.44 UW163_RS02010 class II glutamine amidotransferase 0.55 UW163_RS08235 histidine ammonia-lyase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF3024 Glutamine amidotransferase, class-II 0.55 GFF3589 Histidine ammonia-lyase (EC 4.3.1.3) — —
Ralstonia solanacearum GMI1000 0.44 RS_RS02405 class II glutamine amidotransferase 0.55 RS_RS13250 histidine ammonia-lyase low > 80
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS11575 class II glutamine amidotransferase 0.55 RALBFv3_RS05390 histidine ammonia-lyase low > 76
Acinetobacter baumannii LAC-4 0.44 RR41_RS14835 class II glutamine amidotransferase 0.71 RR41_RS00385 histidine ammonia-lyase low > 55
Castellaniella sp019104865 MT123 0.43 ABCV34_RS06215 class II glutamine amidotransferase 0.51 ABCV34_RS12780 histidine ammonia-lyase low > 48
Variovorax sp. SCN45 0.43 GFF6320 Putative glutamine amidotransferase YafJ 0.53 GFF6409 Histidine ammonia-lyase (EC 4.3.1.3) low > 127

Not shown: 20 genomes with orthologs for CSW01_11360 only; 33 genomes with orthologs for CSW01_06080 only