| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03795 | | phosphate ABC transporter ATP-binding protein | 1.0 | CSW01_05825 | | transcriptional regulator HexR | 0.49 | 10 |
| Shewanella loihica PV-4 | 0.76 | Shew_1700 | | phosphate ABC transporter, ATPase subunit (RefSeq) | 0.78 | Shew_2049 | | DNA-binding transcriptional regulator HexR (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.75 | Shewana3_2732 | | phosphate ABC transporter, ATPase subunit (RefSeq) | 0.77 | Shewana3_2152 | | DNA-binding transcriptional regulator HexR (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.74 | SO1725 | pstB-1 | phosphate ABC transporter, ATP-binding protein (NCBI ptt file) | 0.77 | SO2490 | | transcriptional regulator, RpiR family (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.74 | Sama_1410 | | phosphate ABC transporter, ATP-binding protein (RefSeq) | 0.77 | Sama_1813 | | DNA-binding transcriptional regulator HexR (RefSeq) | — | — |
| Pseudomonas stutzeri RCH2 | 0.71 | Psest_0222 | | phosphate ABC transporter, ATP-binding protein | 0.57 | Psest_0851 | | Transcriptional regulators | — | — |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS16030 | | phosphate ABC transporter ATP-binding protein | 0.75 | DZA65_RS10575 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Pseudomonas fluorescens GW456-L13 | 0.71 | PfGW456L13_756 | | Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) | 0.57 | PfGW456L13_1900 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.71 | AO353_09890 | | phosphate ABC transporter ATP-binding protein | 0.57 | AO353_03365 | | transcriptional regulator | low | > 101 |
| Serratia liquefaciens MT49 | 0.71 | IAI46_18900 | | phosphate ABC transporter ATP-binding protein | 0.78 | IAI46_14580 | | MurR/RpiR family transcriptional regulator | low | > 87 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS15210 | | phosphate ABC transporter ATP-binding protein | 0.75 | HGI48_RS10160 | | MurR/RpiR family transcriptional regulator | low | > 71 |
| Pseudomonas fluorescens FW300-N2E2 | 0.71 | Pf6N2E2_4072 | | Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) | 0.57 | Pf6N2E2_2886 | | Phosphogluconate repressor HexR, RpiR family | low | > 103 |
| Dickeya dadantii 3937 | 0.70 | DDA3937_RS15135 | | phosphate ABC transporter ATP-binding protein | 0.75 | DDA3937_RS10130 | | MurR/RpiR family transcriptional regulator | low | > 74 |
| Pseudomonas sp. RS175 | 0.70 | PFR28_04486 | | Phosphate import ATP-binding protein PstB | 0.57 | PFR28_00572 | | HTH-type transcriptional regulator HexR | low | > 88 |
| Pseudomonas syringae pv. syringae B728a | 0.70 | Psyr_5038 | | phosphate ABC transporter ATP-binding protein, PhoT family | 0.56 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.70 | Psyr_5038 | | phosphate ABC transporter ATP-binding protein, PhoT family | 0.56 | Psyr_1119 | | Helix-turn-helix protein RpiR:Sugar isomerase (SIS) | low | > 86 |
| Pseudomonas aeruginosa MRSN321 | 0.70 | PFGADD_05617 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.55 | PFGADD_01784 | hexR | HTH-type transcriptional regulator HexR | — | — |
| Pseudomonas aeruginosa PUPa3 | 0.70 | NPBIFN_05693 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.55 | NPBIFN_01820 | hexR | HTH-type transcriptional regulator HexR | — | — |
| Pseudomonas aeruginosa PA14 | 0.70 | IKLFDK_26625 | | phosphate ABC transporter ATP-binding protein PstB | 0.55 | IKLFDK_16180 | | HTH-type transcriptional regulator HexR | — | — |
| Pseudomonas orientalis W4I3 | 0.70 | QF045_RS02425 | | phosphate ABC transporter ATP-binding protein PstB | 0.57 | QF045_RS24250 | | MurR/RpiR family transcriptional regulator | low | > 93 |
| Pseudomonas lactucae CFBP13502 | 0.70 | GEMAOFIL_00080 | | Phosphate import ATP-binding protein PstB | 0.57 | GEMAOFIL_04559 | | HTH-type transcriptional regulator HexR | low | > 96 |
| Pseudomonas sp. BP01 | 0.70 | JOY50_RS08870 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.57 | JOY50_RS11445 | hexR | DNA-binding transcriptional regulator HexR | low | > 84 |
| Pseudomonas sp. FW215-L2 | 0.70 | GFF1209 | | Phosphate import ATP-binding protein PstB | 0.57 | GFF3485 | | HTH-type transcriptional regulator HexR | low | > 111 |
| Pectobacterium carotovorum WPP14 | 0.70 | HER17_RS06440 | | phosphate ABC transporter ATP-binding protein PstB | 0.77 | HER17_RS11785 | | MurR/RpiR family transcriptional regulator | low | > 75 |
| Pseudomonas simiae WCS417 | 0.70 | PS417_28070 | | phosphate ABC transporter ATP-binding protein | 0.57 | PS417_22115 | | transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.70 | AO356_11030 | | phosphate ABC transporter ATP-binding protein | 0.57 | AO356_05165 | | transcriptional regulator | low | > 104 |
| Pseudomonas segetis P6 | 0.70 | ACVTMO_RS00590 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.57 | ACVTMO_RS14030 | | MurR/RpiR family transcriptional regulator | — | — |
| Pseudomonas sp. SVBP6 | 0.70 | COO64_RS01700 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.58 | COO64_RS04585 | hexR | DNA-binding transcriptional regulator HexR | low | > 91 |
| Pseudomonas putida KT2440 | 0.70 | PP_5326 | | phosphate ABC transporter ATP-binding protein | 0.57 | PP_1021 | | DNA-binding transcriptional regulator | — | — |
| Pseudomonas protegens RBAN4 | 0.70 | FABNJH_30850 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.57 | FABNJH_23805 | hexR | HTH-type transcriptional regulator HexR | — | — |
| Pseudomonas sp. DMC3 | 0.70 | GFF476 | | Phosphate import ATP-binding protein PstB | 0.58 | GFF5141 | | HTH-type transcriptional regulator HexR | low | > 89 |
| Pseudomonas sp. S08-1 | 0.70 | OH686_13425 | | phosphate ABC transporter, ATP-binding protein | 0.58 | OH686_02440 | | Phosphogluconate repressor HexR, RpiR family | low | > 80 |
| Pseudomonas fluorescens SBW25 | 0.70 | PFLU_RS29755 | | phosphate ABC transporter ATP-binding protein | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.70 | PFLU_RS29755 | | phosphate ABC transporter ATP-binding protein | 0.57 | PFLU_RS23730 | | MurR/RpiR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.70 | Pf1N1B4_2037 | | Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) | 0.57 | Pf1N1B4_590 | | Phosphogluconate repressor HexR, RpiR family | low | > 87 |
| Pantoea sp. MT58 | 0.65 | IAI47_05170 | | phosphate ABC transporter ATP-binding protein | 0.63 | IAI47_08490 | | MurR/RpiR family transcriptional regulator | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.64 | PagCFBP13516_RS05460 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.62 | PagCFBP13516_RS08665 | | MurR/RpiR family transcriptional regulator | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.64 | MIT1002_00876 | | Phosphate import ATP-binding protein PstB 3 | 0.73 | MIT1002_02408 | | putative HTH-type transcriptional regulator YbbH | — | — |
| Erwinia tracheiphila SCR3 | 0.56 | LU632_RS24895 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.64 | LU632_RS13365 | | MurR/RpiR family transcriptional regulator | low | > 73 |
| Erwinia tracheiphila HP pepo 2.2 | 0.56 | IJEDHG_09560 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.64 | IJEDHG_22185 | | transcriptional regulator HexR | — | — |
| Klebsiella pneumoniae MKP103 | 0.56 | KDGMDA_08760 | | phosphate ABC transporter ATP-binding protein PstB | 0.72 | KDGMDA_25375 | | transcriptional regulator HexR | — | — |
| Escherichia coli ECRC100 | 0.56 | OKFHMN_14895 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | OKFHMN_26325 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC99 | 0.56 | KEDOAH_13255 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | KEDOAH_01780 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Klebsiella pneumoniae MRSN742743 | 0.56 | GJGHJB_05017 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.72 | GJGHJB_01806 | rpiR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia fergusonii Becca | 0.56 | EFB2_04908 | | Phosphate import ATP-binding protein PstB | 0.73 | EFB2_02089 | | HTH-type transcriptional regulator HexR | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.56 | OHPLBJKB_04328 | | Phosphate import ATP-binding protein PstB | 0.73 | OHPLBJKB_01875 | | HTH-type transcriptional regulator HexR | — | — |
| Escherichia coli ECRC98 | 0.56 | JDDGAC_18515 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | JDDGAC_00900 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC101 | 0.56 | MCAODC_05400 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | MCAODC_19080 | hexR | DNA-binding transcriptional regulator HexR | low | > 87 |
| Escherichia coli Nissle 1917 | 0.56 | ECOLIN_RS21435 | | phosphate ABC transporter ATP-binding protein PstB | 0.73 | ECOLIN_RS10325 | | DNA-binding transcriptional regulator HexR | — | — |
| Klebsiella michiganensis M5al | 0.56 | BWI76_RS00145 | | phosphate ABC transporter ATP-binding protein | 0.72 | BWI76_RS18110 | | transcriptional regulator HexR | — | — |
| Escherichia coli ECOR27 | 0.56 | NOLOHH_07025 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | NOLOHH_16840 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli BW25113 | 0.56 | b3725 | pstB | phosphate transporter subunit (NCBI) | 0.73 | b1853 | yebK | predicted DNA-binding transcriptional regulator (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.56 | BNILDI_04500 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | BNILDI_15635 | hexR | DNA-binding transcriptional regulator HexR | — | — |
| Escherichia coli ECRC102 | 0.56 | NIAGMN_12650 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | NIAGMN_01735 | hexR | DNA-binding transcriptional regulator HexR | low | > 80 |
| Escherichia coli BL21 | 0.56 | ECD_03609 | | phosphate ABC transporter ATPase | 0.73 | ECD_01824 | | putative DNA-binding transcriptional regulator | — | — |
| Enterobacter asburiae PDN3 | 0.56 | EX28DRAFT_4001 | | phosphate ABC transporter, ATP-binding protein | 0.74 | EX28DRAFT_0703 | | transcriptional regulator, RpiR family | — | — |
| Escherichia coli ECOR38 | 0.56 | HEPCGN_13605 | pstB | phosphate ABC transporter ATP-binding protein PstB | 0.73 | HEPCGN_04730 | hexR | DNA-binding transcriptional regulator HexR | low | > 88 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF1737 | | Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) | 0.72 | GFF1632 | | Phosphogluconate repressor HexR, RpiR family | 0.61 | 45 |
| Rahnella sp. WP5 | 0.55 | EX31_RS06055 | | phosphate ABC transporter ATP-binding protein PstB | 0.76 | EX31_RS10635 | | MurR/RpiR family transcriptional regulator | low | > 89 |
| Paraburkholderia sabiae LMG 24235 | 0.55 | QEN71_RS04835 | | phosphate ABC transporter ATP-binding protein PstB | 0.30 | QEN71_RS26925 | | MurR/RpiR family transcriptional regulator | low | > 153 |
| Castellaniella sp019104865 MT123 | 0.55 | ABCV34_RS15600 | | phosphate ABC transporter ATP-binding protein PstB | 0.39 | ABCV34_RS08655 | | SIS domain-containing protein | — | — |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_04642 | | Phosphate import ATP-binding protein PstB | 0.74 | MPMX20_02758 | | HTH-type transcriptional regulator HexR | low | > 85 |
| Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS13455 | | phosphate ABC transporter ATP-binding protein | 0.34 | RR42_RS06120 | | transcriptional regulator | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.54 | H281DRAFT_04414 | | phosphate ABC transporter ATP-binding protein, PhoT family | 0.33 | H281DRAFT_04279 | | transcriptional regulator, RpiR family | low | > 103 |
| Burkholderia phytofirmans PsJN | 0.54 | BPHYT_RS14130 | | phosphate ABC transporter ATP-binding protein | 0.34 | BPHYT_RS16740 | | transcriptional regulator | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.54 | ABIE53_002992 | | phosphate transport system ATP-binding protein | 0.35 | ABIE53_003518 | | RpiR family carbohydrate utilization transcriptional regulator | low | > 113 |
| Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS06325 | | phosphate ABC transporter ATP-binding protein | 0.32 | HSERO_RS05505 | | transcriptional regulator | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.54 | GFF4233 | | Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) | 0.33 | GFF1364 | | Phosphogluconate repressor HexR, RpiR family | low | > 92 |
| Collimonas humicola GW821-FHT01A05 | 0.53 | MPMX01_02039 | | Phosphate import ATP-binding protein PstB | 0.31 | MPMX01_03246 | | HTH-type transcriptional regulator HexR | low | > 87 |
| Acidovorax sp. GW101-3H11 | 0.53 | Ac3H11_459 | | Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1) | 0.34 | Ac3H11_2055 | | Probable transcriptional regulator | low | > 79 |
Not shown: 35 genomes with orthologs for CSW01_03795 only; 4 genomes with orthologs for CSW01_05825 only