| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_05210 | | GTP 3',8-cyclase MoaA | 1.0 | CSW01_03695 | | ribosomal large subunit pseudouridine synthase D | 0.66 | 3 |
| Dickeya dadantii 3937 | 0.67 | DDA3937_RS08565 | | GTP 3',8-cyclase MoaA | 0.70 | DDA3937_RS16110 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 74 |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS08705 | | GTP 3',8-cyclase MoaA | 0.70 | HGI48_RS16235 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 71 |
| Enterobacter asburiae PDN3 | 0.67 | EX28DRAFT_2209 | | molybdenum cofactor biosynthesis protein A, bacterial | 0.70 | EX28DRAFT_2695 | | pseudouridine synthase, RluA family | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.66 | GFF678 | | Molybdenum cofactor biosynthesis protein MoaA | 0.70 | GFF4182 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | 0.55 | 77 |
| Dickeya dianthicola ME23 | 0.66 | DZA65_RS09000 | | GTP 3',8-cyclase MoaA | 0.70 | DZA65_RS17330 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.64 | 25 |
| Escherichia coli BW25113 | 0.66 | b0781 | moaA | molybdenum cofactor biosynthesis protein A (NCBI) | 0.70 | b2594 | rluD | 23S rRNA pseudouridine synthase (NCBI) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.66 | OHPLBJKB_02932 | | 'GTP 3',8-cyclase' transl_table=11 | 0.70 | OHPLBJKB_01112 | | Ribosomal large subunit pseudouridine synthase D | low | > 74 |
| Escherichia coli Nissle 1917 | 0.66 | ECOLIN_RS04165 | | GTP 3',8-cyclase MoaA | 0.70 | ECOLIN_RS14675 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 55 |
| Escherichia fergusonii Becca | 0.66 | EFB2_03324 | | GTP 3',8-cyclase | 0.70 | EFB2_01296 | | Ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Escherichia coli ECRC102 | 0.66 | NIAGMN_04415 | moaA | GTP 3',8-cyclase MoaA | 0.70 | NIAGMN_19020 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 80 |
| Escherichia coli BL21 | 0.66 | ECD_00748 | | molybdopterin biosynthesis protein A | 0.70 | ECD_02484 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | low | > 61 |
| Escherichia coli ECRC62 | 0.66 | BNILDI_21005 | moaA | GTP 3',8-cyclase MoaA | 0.71 | BNILDI_11730 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 75 |
| Escherichia coli ECOR27 | 0.66 | NOLOHH_22735 | moaA | GTP 3',8-cyclase MoaA | 0.71 | NOLOHH_12925 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 75 |
| Escherichia coli ECRC100 | 0.66 | OKFHMN_06370 | moaA | GTP 3',8-cyclase MoaA | 0.70 | OKFHMN_21250 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 79 |
| Escherichia coli ECRC101 | 0.66 | MCAODC_25585 | moaA | GTP 3',8-cyclase MoaA | 0.70 | MCAODC_11780 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 87 |
| Escherichia coli ECRC98 | 0.66 | JDDGAC_10005 | moaA | GTP 3',8-cyclase MoaA | 0.70 | JDDGAC_24915 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 87 |
| Escherichia coli ECRC99 | 0.66 | KEDOAH_21540 | moaA | GTP 3',8-cyclase MoaA | 0.70 | KEDOAH_06970 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_01410 | | GTP 3',8-cyclase | 0.70 | MPMX20_03463 | | Ribosomal large subunit pseudouridine synthase D | low | > 85 |
| Escherichia coli ECOR38 | 0.66 | HEPCGN_01670 | moaA | GTP 3',8-cyclase MoaA | 0.70 | HEPCGN_20375 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 88 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_06565 | | GTP 3',8-cyclase MoaA | 0.70 | IAI46_03985 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 87 |
| Klebsiella pneumoniae MRSN742743 | 0.65 | GJGHJB_03440 | moaA | GTP 3' 8-cyclase MoaA | 0.70 | GJGHJB_01188 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 83 |
| Klebsiella pneumoniae MKP103 | 0.65 | KDGMDA_17080 | | GTP 3' 8-cyclase MoaA | 0.70 | KDGMDA_02140 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.20 | 69 |
| Rahnella sp. WP5 | 0.64 | EX31_RS23740 | | GTP 3',8-cyclase MoaA | 0.69 | EX31_RS07570 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.62 | 22 |
| Pantoea sp. MT58 | 0.64 | IAI47_13495 | | GTP 3',8-cyclase MoaA | 0.70 | IAI47_04425 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 76 |
| Erwinia tracheiphila SCR3 | 0.64 | LU632_RS09175 | moaA | GTP 3',8-cyclase MoaA | 0.68 | LU632_RS16945 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 73 |
| Pantoea agglomerans CFBP13505 P0401 | 0.64 | PagCFBP13516_RS13605 | moaA | GTP 3',8-cyclase MoaA | 0.70 | PagCFBP13516_RS04800 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 80 |
| Erwinia tracheiphila HP pepo 2.2 | 0.64 | IJEDHG_19600 | moaA | GTP 3' 8-cyclase MoaA | 0.68 | IJEDHG_26870 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 61 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS13405 | | GTP 3',8-cyclase MoaA | 0.71 | HER17_RS05400 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 75 |
| Erwinia amylovora T8 | 0.63 | OLJFJH_16725 | | GTP 3' 8-cyclase MoaA | 0.70 | OLJFJH_09725 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 58 |
| Shewanella loihica PV-4 | 0.63 | Shew_0087 | moaA | molybdenum cofactor biosynthesis protein A (RefSeq) | 0.60 | Shew_2950 | | RluA family pseudouridine synthase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.63 | Sama_3524 | moaA | molybdenum cofactor biosynthesis protein A (RefSeq) | 0.59 | Sama_2605 | | pseudouridylate synthase (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.61 | Shewana3_0274 | moaA | molybdenum cofactor biosynthesis protein A (RefSeq) | 0.60 | Shewana3_3171 | | ribosomal large subunit pseudouridine synthase D (RefSeq) | low | > 73 |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_05260 | moaA | GTP 3',8-cyclase MoaA | 0.46 | OKGIIK_01790 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 53 |
| Alteromonas macleodii MIT1002 | 0.52 | MIT1002_01395 | | Cyclic pyranopterin monophosphate synthase | 0.59 | MIT1002_02679 | | Ribosomal large subunit pseudouridine synthase D | low | > 70 |
| Rhodanobacter denitrificans MT42 | 0.51 | LRK55_RS13675 | | GTP 3',8-cyclase MoaA | 0.48 | LRK55_RS04745 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.51 | LRK53_RS14655 | | GTP 3',8-cyclase MoaA | 0.47 | LRK53_RS05045 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 59 |
| Rhodanobacter denitrificans FW104-10B01 | 0.51 | LRK54_RS13955 | | GTP 3',8-cyclase MoaA | 0.48 | LRK54_RS04965 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.51 | ABZR86_RS03535 | | GTP 3',8-cyclase MoaA | 0.48 | ABZR86_RS10965 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 74 |
| Synechococcus elongatus PCC 7942 | 0.44 | Synpcc7942_1282 | moaA | molybdenum cofactor biosynthesis protein A | 0.29 | Synpcc7942_1112 | | ribosomal large subunit pseudouridine synthase D | low | > 38 |
| Marinobacter adhaerens HP15 | 0.32 | HP15_2952 | | molybdenum cofactor biosynthesis protein A | 0.51 | HP15_527 | | pseudouridine synthase, RluA family | low | > 73 |
| Herbaspirillum seropedicae SmR1 | 0.31 | HSERO_RS18185 | | molybdenum cofactor biosynthesis protein MoaA | 0.35 | HSERO_RS15070 | | ribosomal large subunit pseudouridine synthase D | low | > 78 |
| Pseudomonas aeruginosa PUPa3 | 0.27 | NPBIFN_01096 | moaA | GTP 3' 8-cyclase MoaA | 0.51 | NPBIFN_04812 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.27 | IKLFDK_19940 | | GTP 3' 8-cyclase MoaA | 0.51 | IKLFDK_00810 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 98 |
| Pseudomonas aeruginosa MRSN321 | 0.27 | PFGADD_01092 | moaA | GTP 3' 8-cyclase MoaA | 0.51 | PFGADD_04751 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 99 |
| Pseudomonas fluorescens FW300-N1B4 | 0.27 | Pf1N1B4_5730 | | Molybdenum cofactor biosynthesis protein MoaA | 0.54 | Pf1N1B4_2822 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas segetis P6 | 0.27 | ACVTMO_RS10770 | moaA | GTP 3',8-cyclase MoaA | 0.53 | ACVTMO_RS19440 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 75 |
| Pseudomonas lactucae CFBP13502 | 0.27 | GEMAOFIL_03419 | | 'GTP 3',8-cyclase' transl_table=11 | 0.54 | GEMAOFIL_00969 | | Ribosomal large subunit pseudouridine synthase D | low | > 96 |
| Pseudomonas fluorescens FW300-N2E2 | 0.27 | Pf6N2E2_734 | | Molybdenum cofactor biosynthesis protein MoaA | 0.54 | Pf6N2E2_5127 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.27 | AO356_25230 | | cyclic pyranopterin phosphate synthase MoaA | 0.55 | AO356_15925 | | ribosomal large subunit pseudouridine synthase D | low | > 104 |
| Rhodopseudomonas palustris CGA009 | 0.27 | TX73_010195 | | GTP 3',8-cyclase MoaA | 0.33 | TX73_001905 | | RluA family pseudouridine synthase | low | > 86 |
| Pseudomonas sp. RS175 | 0.27 | PFR28_01637 | | 'GTP 3',8-cyclase' transl_table=11 | 0.54 | PFR28_03748 | | Ribosomal large subunit pseudouridine synthase D | low | > 88 |
| Pseudomonas fluorescens FW300-N2E3 | 0.27 | AO353_22120 | | cyclic pyranopterin phosphate synthase MoaA | 0.54 | AO353_14220 | | ribosomal large subunit pseudouridine synthase D | 0.26 | 99 |
| Pseudomonas simiae WCS417 | 0.27 | PS417_15695 | | molybdenum cofactor biosynthesis protein A | 0.54 | PS417_03820 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.27 | CA265_RS12615 | | GTP 3',8-cyclase MoaA | 0.28 | CA265_RS14415 | | pseudouridine synthase | low | > 88 |
| Agrobacterium fabrum C58 | 0.27 | Atu1695 | | molybdenum cofactor biosynthesis protein A | 0.33 | Atu2443 | | ribosomal large subunit pseudouridine synthase, RluD subfamily | — | — |
| Sinorhizobium meliloti 1021 | 0.27 | SMc00144 | | molybdenum cofactor biosynthesis protein A | 0.33 | SMc00647 | | ribosomal large subunit pseudouridine synthase | 0.38 | 26 |
| Pseudomonas syringae pv. syringae B728a | 0.26 | Psyr_2327 | | GTP cyclohydrolase subunit MoaA | 0.54 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.26 | Psyr_2327 | | GTP cyclohydrolase subunit MoaA | 0.54 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Azospirillum sp. SherDot2 | 0.26 | MPMX19_00538 | | GTP 3',8-cyclase | 0.33 | MPMX19_05442 | | Ribosomal large subunit pseudouridine synthase D | low | > 112 |
| Lysobacter sp. OAE881 | 0.26 | ABIE51_RS14055 | | GTP 3',8-cyclase MoaA | 0.49 | ABIE51_RS04885 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 62 |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS10585 | | GTP 3',8-cyclase MoaA | 0.36 | ABIE40_RS14790 | | RluA family pseudouridine synthase | low | > 107 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.26 | Xcc-8004.4022.1 | | Molybdenum cofactor biosynthesis protein MoaA | 0.51 | Xcc-8004.1362.1 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | low | > 74 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.26 | Echvi_1894 | | molybdenum cofactor biosynthesis protein A, bacterial | 0.31 | Echvi_0642 | | pseudouridine synthase, RluA family | low | > 79 |
| Pseudomonas sp. BP01 | 0.26 | JOY50_RS01585 | moaA | GTP 3',8-cyclase MoaA | 0.54 | JOY50_RS27130 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 84 |
| Bosea sp. OAE506 | 0.25 | ABIE41_RS21120 | | GTP 3',8-cyclase MoaA | 0.32 | ABIE41_RS05635 | | RluA family pseudouridine synthase | low | > 77 |
| Magnetospirillum magneticum AMB-1 | 0.25 | AMB_RS00780 | | GTP 3',8-cyclase MoaA | 0.30 | AMB_RS16095 | | RluA family pseudouridine synthase | — | — |
| Pseudomonas sp. DMC3 | 0.25 | GFF1642 | | GTP 3',8-cyclase | 0.54 | GFF4004 | | Ribosomal large subunit pseudouridine synthase D | low | > 89 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.25 | ABZR88_RS21605 | | GTP 3',8-cyclase MoaA | 0.29 | ABZR88_RS03985 | | RluA family pseudouridine synthase | low | > 71 |
| Pseudomonas sp. SVBP6 | 0.25 | COO64_RS14255 | moaA | GTP 3',8-cyclase MoaA | 0.54 | COO64_RS11055 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 91 |
| Xanthobacter sp. DMC5 | 0.25 | GFF2380 | | GTP 3',8-cyclase | 0.36 | GFF2508 | | Ribosomal large subunit pseudouridine synthase D | — | — |
Not shown: 5 genomes with orthologs for CSW01_05210 only; 41 genomes with orthologs for CSW01_03695 only