Conservation of cofitness between CSW01_07575 and CSW01_02840 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07575 NAD-dependent protein deacylase 1.0 CSW01_02840 DNA mismatch repair protein MutS 0.48 14
Enterobacter sp. TBS_079 0.62 MPMX20_01801 NAD-dependent protein deacylase 0.69 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Enterobacter asburiae PDN3 0.61 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family 0.69 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS11230 NAD-dependent deacylase 0.69 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Escherichia coli ECRC102 0.60 NIAGMN_24390 cobB NAD-dependent protein deacylase 0.68 NIAGMN_18295 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC62 0.60 BNILDI_19130 cobB NAD-dependent protein deacylase 0.68 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC101 0.60 MCAODC_22800 cobB NAD-dependent protein deacylase 0.68 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECOR27 0.60 NOLOHH_20965 cobB NAD-dependent protein deacylase 0.68 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 76
Escherichia coli Nissle 1917 0.60 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 0.68 ECOLIN_RS15275 DNA mismatch repair protein MutS — —
Escherichia coli BL21 0.60 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 0.68 ECD_02583 methyl-directed mismatch repair protein low > 61
Escherichia coli ECRC99 0.60 KEDOAH_24315 cobB NAD-dependent protein deacylase 0.68 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia fergusonii Becca 0.60 EFB2_02855 NAD-dependent protein deacylase 0.68 EFB2_01179 DNA mismatch repair protein MutS low > 86
Escherichia coli ECOR38 0.60 HEPCGN_24045 cobB NAD-dependent protein deacylase 0.68 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_02546 NAD-dependent protein deacylase 0.68 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 74
Escherichia coli ECRC98 0.60 JDDGAC_07100 cobB NAD-dependent protein deacylase 0.68 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC100 0.60 OKFHMN_03440 cobB NAD-dependent protein deacylase 0.68 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 79
Escherichia coli BW25113 0.60 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 0.68 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.60 KDGMDA_18825 NAD-dependent protein deacylase 0.70 KDGMDA_03170 DNA mismatch repair protein MutS low > 95
Pectobacterium carotovorum WPP14 0.60 HER17_RS08800 NAD-dependent protein deacylase 0.70 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.60 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.69 GFF4773 DNA mismatch repair protein MutS low > 78
Serratia liquefaciens MT49 0.60 IAI46_10355 NAD-dependent protein deacylase 0.70 IAI46_03800 DNA mismatch repair protein MutS low > 87
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS19435 NAD-dependent protein deacylase 0.70 PagCFBP13505_RS16730 DNA mismatch repair protein MutS low > 74
Pantoea sp. MT58 0.58 IAI47_11950 NAD-dependent protein deacylase 0.70 IAI47_04240 DNA mismatch repair protein MutS low > 76
Rahnella sp. WP5 0.57 EX31_RS24540 NAD-dependent protein deacylase 0.70 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Erwinia tracheiphila HP pepo 2.2 0.56 IJEDHG_00440 cobB NAD-dependent protein deacylase 0.69 IJEDHG_17505 mutS DNA mismatch repair protein MutS low > 61
Erwinia tracheiphila SCR3 0.56 LU632_RS14640 cobB NAD-dependent protein deacylase 0.69 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 73
Dickeya dadantii 3937 0.56 DDA3937_RS12975 NAD-dependent protein deacylase 0.70 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS13510 NAD-dependent protein deacylase 0.70 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS13045 NAD-dependent protein deacylase 0.70 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Shewanella amazonensis SB2B 0.53 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.64 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.52 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.65 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) — —
Alteromonas macleodii MIT1002 0.51 MIT1002_02145 NAD-dependent protein deacylase 0.61 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Shewanella oneidensis MR-1 0.51 SO1938 cobB cobB protein (NCBI ptt file) 0.64 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Rhodospirillum rubrum S1H 0.49 Rru_A3645 Silent information regulator protein Sir2 (NCBI) 0.33 Rru_A3541 MutS 1 protein (NCBI) low > 58
Azospirillum brasilense Sp245 0.49 AZOBR_RS00620 NAD-dependent deacetylase 0.31 AZOBR_RS02125 DNA mismatch repair protein MutS low > 97
Azospirillum sp. SherDot2 0.49 MPMX19_02648 NAD-dependent protein deacylase 0.32 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Sphingobium sp. HT1-2 0.47 GFF4045 NAD-dependent protein deacetylase of SIR2 family 0.30 GFF4191 DNA mismatch repair protein MutS low > 95
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS00415 NAD-dependent deacylase 0.28 A4249_RS12110 DNA mismatch repair protein MutS low > 48
Magnetospirillum magneticum AMB-1 0.44 AMB_RS04415 NAD-dependent protein deacylase 0.32 AMB_RS01455 DNA mismatch repair protein MutS low > 64
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_03594 SIR2 family protein 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 67
Caulobacter crescentus NA1000 0.43 CCNA_03594 SIR2 family protein 0.29 CCNA_00012 DNA mismatch repair protein MutS low > 66
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_1943 NAD-dependent protein deacetylases, SIR2 family 0.33 Ga0059261_3784 DNA mismatch repair protein MutS low > 68
Dinoroseobacter shibae DFL-12 0.36 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.33 Dshi_3466 DNA mismatch repair protein MutS (RefSeq) low > 64
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS12815 NAD-dependent deacylase 0.35 HMPREF1078_RS06455 DNA mismatch repair protein MutS low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.34 ABZR88_RS09835 Sir2 family NAD-dependent protein deacetylase 0.35 ABZR88_RS10580 DNA mismatch repair protein MutS low > 71
Pseudomonas stutzeri RCH2 0.32 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.56 Psest_2875 DNA mismatch repair protein MutS low > 67
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_23430 NAD-dependent deacetylase 0.56 AO356_05875 DNA mismatch repair protein MutS low > 104
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS13055 NAD-dependent protein deacylase 0.47 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Acidovorax sp. GW101-3H11 0.31 Ac3H11_4140 NAD-dependent protein deacetylase of SIR2 family 0.44 Ac3H11_3641 DNA mismatch repair protein MutS low > 79
Variovorax sp. SCN45 0.30 GFF3139 NAD-dependent protein deacetylase of SIR2 family 0.42 GFF6634 DNA mismatch repair protein MutS low > 127
Kangiella aquimarina DSM 16071 0.30 B158DRAFT_0796 NAD-dependent protein deacetylases, SIR2 family 0.51 B158DRAFT_1529 DNA mismatch repair protein MutS low > 40
Pseudomonas sp. S08-1 0.30 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.56 OH686_18195 DNA mismatch repair protein MutS low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS18020 NAD-dependent deacylase 0.48 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS10995 NAD-dependent deacylase 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Pseudomonas putida KT2440 0.26 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.56 PP_1626 DNA mismatch repair protein MutS low > 96
Pseudomonas lactucae CFBP13502 0.24 GEMAOFIL_00192 NAD-dependent protein deacylase Sir2 0.55 GEMAOFIL_01323 DNA mismatch repair protein MutS low > 96
Dechlorosoma suillum PS 0.18 Dsui_2796 NAD-dependent protein deacetylase, SIR2 family 0.49 Dsui_2244 DNA mismatch repair protein MutS low > 51
Pseudomonas segetis P6 0.17 MPMX49_01808 NAD-dependent protein deacetylase 0.55 MPMX49_03425 DNA mismatch repair protein MutS low > 75
Lysobacter sp. OAE881 0.16 ABIE51_RS09130 NAD-dependent protein deacetylase 0.52 ABIE51_RS07785 DNA mismatch repair protein MutS low > 62
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS05345 NAD-dependent protein deacetylase 0.52 ABZR86_RS00630 DNA mismatch repair protein MutS low > 74
Pseudomonas fluorescens SBW25-INTG 0.13 PFLU_RS10600 NAD-dependent protein deacetylase 0.55 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25 0.13 PFLU_RS10600 NAD-dependent protein deacetylase 0.55 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas sp. DMC3 0.13 GFF1649 NAD-dependent protein deacetylase 0.55 GFF2086 DNA mismatch repair protein MutS low > 89
Pseudomonas fluorescens FW300-N2E3 0.12 AO353_26795 NAD-dependent deacetylase 0.56 AO353_16625 DNA mismatch repair protein MutS low > 101

Not shown: 2 genomes with orthologs for CSW01_07575 only; 55 genomes with orthologs for CSW01_02840 only