Conservation of cofitness between CSW01_03435 and CSW01_02840 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03435 protease 1.0 CSW01_02840 DNA mismatch repair protein MutS 0.76 9
Klebsiella michiganensis M5al 0.75 BWI76_RS24970 peptidase U32 0.69 BWI76_RS22600 DNA mismatch repair protein MutS low > 92
Klebsiella pneumoniae MRSN742743 0.75 KFA93_RS13035 peptidase U32 family protein 0.69 KFA93_RS18635 mutS;go_function=ATP DNA mismatch repair protein MutS low > 82
Klebsiella pneumoniae MKP103 0.75 KDGMDA_05840 protease 0.70 KDGMDA_03170 DNA mismatch repair protein MutS low > 94
Escherichia coli BW25113 0.74 b3158 yhbU predicted peptidase (collagenase-like) (NCBI) 0.68 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Escherichia coli ECRC99 0.74 KEDOAH_09975 protease 0.68 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_00542 putative protease YhbU 0.68 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 74
Escherichia coli ECOR27 0.74 NOLOHH_09975 ubiU Ubiquinone biosynthesis protein UbiU 0.68 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECOR38 0.74 HEPCGN_17050 protease 0.68 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 88
Escherichia coli ECRC62 0.74 BNILDI_01555 ubiU Ubiquinone biosynthesis protein UbiU 0.68 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC100 0.74 OKFHMN_18175 protease 0.68 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 79
Escherichia coli ECRC98 0.74 JDDGAC_21800 protease 0.68 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECRC102 0.74 NIAGMN_15935 ubiU Ubiquinone biosynthesis protein UbiU 0.68 NIAGMN_18295 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC101 0.74 MCAODC_08695 protease 0.68 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli BL21 0.74 ECD_03025 U32 peptidase family protein 0.68 ECD_02583 methyl-directed mismatch repair protein low > 61
Rahnella sp. WP5 0.74 EX31_RS08480 U32 family peptidase 0.70 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Escherichia coli Nissle 1917 0.74 ECOLIN_RS18140 peptidase U32 family protein 0.68 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Pectobacterium carotovorum WPP14 0.74 HER17_RS18160 U32 family peptidase 0.70 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF1510 FIG139552: Putative protease 0.69 GFF4773 DNA mismatch repair protein MutS low > 78
Escherichia fergusonii Becca 0.74 EFB2_00665 putative protease YhbU 0.68 EFB2_01179 DNA mismatch repair protein MutS low > 86
Dickeya dianthicola ME23 0.73 DZA65_RS03285 U32 family peptidase 0.70 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS03115 U32 family peptidase 0.70 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Dickeya dianthicola 67-19 0.73 HGI48_RS03290 U32 family peptidase 0.70 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Erwinia tracheiphila HP pepo 2.2 0.72 IJEDHG_14005 protease 0.69 IJEDHG_17505 mutS DNA mismatch repair protein MutS low > 61
Erwinia tracheiphila SCR3 0.72 LU632_RS21005 U32 family peptidase 0.69 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 73
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3207 Collagenase and related proteases 0.69 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Pantoea sp. MT58 0.72 IAI47_16965 U32 family peptidase 0.70 IAI47_04240 DNA mismatch repair protein MutS low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04062 putative protease YhbU 0.69 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Serratia liquefaciens MT49 0.71 IAI46_02015 U32 family peptidase 0.70 IAI46_03800 DNA mismatch repair protein MutS low > 87
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13516_RS17185 ubiU ubiquinone anaerobic biosynthesis protein UbiU 0.70 PagCFBP13516_RS04510 mutS DNA mismatch repair protein MutS low > 80
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS48610 peptidase U32 family protein 0.57 DQ20_RS42250 mutS;go_function=ATP DNA mismatch repair protein MutS low > 101
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS13305 peptidase U32 family protein 0.57 DY961_RS14875 mutS;go_function=ATP DNA mismatch repair protein MutS low > 99
Pseudomonas aeruginosa PA14 0.65 IKLFDK_20175 protease 0.57 IKLFDK_18480 DNA mismatch repair protein MutS low > 98
Pseudomonas stutzeri RCH2 0.65 Psest_0835 Collagenase and related proteases 0.56 Psest_2875 DNA mismatch repair protein MutS low > 67
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_22050 protease 0.56 AO353_16625 DNA mismatch repair protein MutS low > 101
Pseudomonas sp. SVBP6 0.64 COO64_RS14190 peptidase U32 family protein 0.56 COO64_RS19805 mutS DNA mismatch repair protein MutS low > 91
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_5746 FIG139552: Putative protease 0.55 Pf1N1B4_3117 DNA mismatch repair protein MutS low > 87
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_25160 protease 0.56 AO356_05875 DNA mismatch repair protein MutS low > 104
Pseudomonas sp. RS175 0.63 PFR28_02214 putative protease YhbU 0.56 PFR28_00429 DNA mismatch repair protein MutS low > 88
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_721 FIG139552: Putative protease 0.56 Pf6N2E2_3035 DNA mismatch repair protein MutS low > 103
Castellaniella sp019104865 MT123 0.63 ABCV34_RS06420 peptidase U32 family protein 0.44 ABCV34_RS00270 DNA mismatch repair protein MutS low > 48
Pseudomonas lactucae CFBP13502 0.63 GEMAOFIL_03433 putative protease YhbU 0.55 GEMAOFIL_01323 DNA mismatch repair protein MutS low > 96
Shewanella loihica PV-4 0.62 Shew_2787 peptidase U32 (RefSeq) 0.66 Shew_1214 DNA mismatch repair protein (RefSeq) low > 60
Pseudomonas simiae WCS417 0.62 PS417_15755 protease 0.55 PS417_05680 DNA mismatch repair protein MutS low > 88
Shewanella sp. ANA-3 0.62 Shewana3_1065 peptidase U32 (RefSeq) 0.65 Shewana3_1125 DNA mismatch repair protein MutS (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO1249 peptidase, U32 family (NCBI ptt file) 0.64 SO3431 mutS DNA mismatch repair protein MutS (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.60 Sama_0998 U32 family peptidase (RefSeq) 0.64 Sama_1045 DNA mismatch repair protein MutS (RefSeq) low > 62
Dechlorosoma suillum PS 0.60 Dsui_0962 collagenase-like protease 0.49 Dsui_2244 DNA mismatch repair protein MutS low > 51
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_2375 Collagenase and related proteases 0.51 B158DRAFT_1529 DNA mismatch repair protein MutS low > 40
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4294 FIG139552: Putative protease 0.44 Ac3H11_3641 DNA mismatch repair protein MutS low > 79
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS16695 protease 0.47 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum UW163 0.53 UW163_RS18050 protease 0.47 UW163_RS12390 DNA mismatch repair protein MutS — —
Ralstonia solanacearum PSI07 0.53 RPSI07_RS06750 U32 family peptidase 0.48 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Ralstonia solanacearum GMI1000 0.49 RS_RS21795 U32 family peptidase 0.47 RS_RS05735 DNA mismatch repair protein MutS low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS08775 protease 0.47 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Rhodopseudomonas palustris CGA009 0.46 TX73_004810 U32 family peptidase 0.33 TX73_002655 DNA mismatch repair protein MutS — —
Magnetospirillum magneticum AMB-1 0.46 AMB_RS02530 U32 family peptidase 0.32 AMB_RS01455 DNA mismatch repair protein MutS low > 64
Azospirillum brasilense Sp245 0.45 AZOBR_RS28235 protease 0.31 AZOBR_RS02125 DNA mismatch repair protein MutS low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_03049 putative protease YhbU 0.32 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Rhodospirillum rubrum S1H 0.43 Rru_A2525 Peptidase U32 (NCBI) 0.33 Rru_A3541 MutS 1 protein (NCBI) low > 58
Sinorhizobium meliloti 1021 0.42 SMa1291 Protease 0.32 SMc01125 DNA mismatch repair protein MutS low > 103
Agrobacterium fabrum C58 0.41 Atu4397 protease 0.33 Atu0345 DNA mismatch repair protein, MutS family low > 89

Not shown: 0 genomes with orthologs for CSW01_03435 only; 60 genomes with orthologs for CSW01_02840 only