Conservation of cofitness between CSW01_01285 and CSW01_01350 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01285 perosamine synthetase 1.0 CSW01_01350 polysaccharide biosynthesis protein 1.00 10
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_4375 perosamine synthetase 0.42 PfGW456L13_2191 nucleotide sugar epimerase/dehydratase WbpM low > 87
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS22110 DegT/DnrJ/EryC1/StrS family aminotransferase 0.40 ABZR87_RS08730 nucleoside-diphosphate sugar epimerase/dehydratase low > 80
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS01760 aminotransferase DegT 0.26 CA265_RS19185 polysaccharide biosynthesis protein low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_12460 aminotransferase DegT 0.25 CA264_12325 polysaccharide biosynthesis protein low > 74
Cellulophaga baltica 18 0.28 M666_RS12340 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.29 M666_RS12345 nucleoside-diphosphate sugar epimerase/dehydratase 0.99 1
Magnetospirillum magneticum AMB-1 0.28 AMB_RS00275 DegT/DnrJ/EryC1/StrS family aminotransferase 0.26 AMB_RS00500 polysaccharide biosynthesis protein
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS12735 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.26 ABZR88_RS12725 nucleoside-diphosphate sugar epimerase/dehydratase 0.48 5
Shewanella amazonensis SB2B 0.27 Sama_2329 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq) 0.51 Sama_2244 polysaccharide biosynthesis protein (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS21000 aminotransferase DegT 0.40 HSERO_RS21110 dTDP-glucose 4,6-dehydratase low > 78
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS13755 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.25 ABI39_RS13770 polysaccharide biosynthesis protein low > 72
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS01585 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.25 HMPREF1078_RS01480 nucleoside-diphosphate sugar epimerase/dehydratase low > 61
Dickeya dadantii 3937 0.26 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.77 DDA3937_RS03410 polysaccharide biosynthesis protein low > 74
Dickeya dianthicola 67-19 0.26 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.77 HGI48_RS03510 polysaccharide biosynthesis protein low > 71
Dickeya dianthicola ME23 0.25 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.77 DZA65_RS03625 polysaccharide biosynthesis protein low > 75
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS15735 pyridoxal phosphate-dependent aminotransferase 0.44 RR42_RS15825 capsular biosynthesis protein 0.68 9
Pseudomonas aeruginosa PA14 0.25 IKLFDK_18130 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.43 IKLFDK_16005 nucleotide sugar epimerase/dehydratase WbpM low > 98
Pseudomonas aeruginosa PUPa3 0.25 DQ20_RS41895 arnB;go_function=transaminase UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.43 DQ20_RS34360 nucleoside-diphosphate sugar epimerase/dehydratase low > 101
Pseudomonas aeruginosa MRSN321 0.25 DY961_RS15250 arnB;go_function=transaminase UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.43 DY961_RS01195 nucleoside-diphosphate sugar epimerase/dehydratase
Fusobacterium nucleatum SB010 0.25 HUW76_01330 LegC family aminotransferase 0.25 HUW76_01325 polysaccharide biosynthesis protein 1.00 3
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.42 AO353_01970 hypothetical protein low > 101
Variovorax sp. OAS795 0.24 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase 0.36 ABID97_RS02200 nucleoside-diphosphate sugar epimerase/dehydratase 0.96 2
Enterobacter asburiae PDN3 0.24 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.49 EX28DRAFT_0519 Predicted nucleoside-diphosphate sugar epimerases low > 76
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.41 Psyr_3636 Polysaccharide biosynthesis protein CapD low > 86
Pseudomonas sp. RS175 0.23 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.42 PFR28_00932 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
Dechlorosoma suillum PS 0.23 Dsui_1769 putative PLP-dependent enzyme possibly involved in cell wall biogenesis 0.33 Dsui_0400 putative nucleoside-diphosphate sugar epimerase low > 51
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_10755 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.29 OKGIIK_07240 flaA1 polysaccharide biosynthesis protein low > 53
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.42 Pf6N2E2_2506 nucleotide sugar epimerase/dehydratase WbpM low > 103
Marinobacter adhaerens HP15 0.23 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.47 HP15_2383 nucleotide sugar epimerase/dehydratase
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.28 H281DRAFT_04851 NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC
Methylophilus sp. DMC18 0.22 GFF528 dTDP-3-amino-3,4,6-trideoxy-alpha-D-glucose transaminase 0.29 GFF568 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 43
Castellaniella sp019104865 MT123 0.22 ABCV34_RS12945 DegT/DnrJ/EryC1/StrS family aminotransferase 0.27 ABCV34_RS13035 nucleoside-diphosphate sugar epimerase/dehydratase
Ralstonia solanacearum PSI07 0.22 RPSI07_RS17515 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.35 RPSI07_RS04445 polysaccharide biosynthesis protein
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.2801.1 Aminotransferase, DegT/DnrJ/EryC1/StrS family 0.28 Xcc-8004.2386.1 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) low > 74
Pseudomonas sp. BP01 0.22 JOY50_RS13135 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.43 JOY50_RS16050 nucleoside-diphosphate sugar epimerase/dehydratase low > 84
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS29145 DegT/DnrJ/EryC1/StrS family aminotransferase 0.29 QEN71_RS25590 nucleoside-diphosphate sugar epimerase/dehydratase low > 153
Paraburkholderia graminis OAS925 0.22 ABIE53_000145 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.28 ABIE53_001163 FlaA1/EpsC-like NDP-sugar epimerase low > 113
Pseudomonas stutzeri RCH2 0.22 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.42 Psest_1825 Predicted nucleoside-diphosphate sugar epimerases
Pseudomonas sp. SVBP6 0.22 COO64_RS21480 vioA dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA 0.40 COO64_RS06660 nucleoside-diphosphate sugar epimerase/dehydratase low > 93
Phaeobacter inhibens DSM 17395 0.22 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase 0.31 PGA1_65p00170 putative capsular polysaccharide biosynthesis protein low > 62
Bacteroides thetaiotaomicron VPI-5482 0.22 BT3376 nucleotide sugar transaminase (NCBI ptt file) 0.24 BT0378 capsular polysaccharide biosynthesis protein capD (NCBI ptt file) low > 81
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_03965 aminotransferase 0.42 AO356_03345 hypothetical protein low > 104
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS08930 aminotransferase DegT 0.30 BPHYT_RS04385 nucleoside-diphosphate sugar oxidoreductase
Pseudomonas sp. DMC3 0.21 GFF2433 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.43 GFF4653 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 89
Rhodanobacter denitrificans MT42 0.21 LRK55_RS04940 DegT/DnrJ/EryC1/StrS family aminotransferase 0.29 LRK55_RS17915 nucleoside-diphosphate sugar epimerase/dehydratase low > 63
Pseudomonas simiae WCS417 0.21 PS417_27245 aminotransferase DegT 0.41 PS417_08190 membrane protein low > 88
Rhodanobacter denitrificans FW104-10B01 0.21 LRK54_RS05160 DegT/DnrJ/EryC1/StrS family aminotransferase 0.29 LRK54_RS18060 polysaccharide biosynthesis protein low > 59
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_05587 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.44 GEMAOFIL_01779 UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase low > 96
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1844 Aminotransferase 0.42 GFF1865 UDP-N-acetylglucosamine 4,6-dehydratase (EC 4.2.1.-) 0.97 18
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.22 Ga0059261_4092 Predicted nucleoside-diphosphate sugar epimerases
Bacteroides ovatus ATCC 8483 0.20 BACOVA_03734 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.23 BACOVA_03688 polysaccharide biosynthesis protein 0.40 54
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase 0.29 ABZR86_RS05540 nucleoside-diphosphate sugar epimerase/dehydratase low > 74
Bosea sp. OAE506 0.17 ABIE41_RS03045 dTDP-4-amino-4,6-dideoxygalactose transaminase 0.17 ABIE41_RS03855 nucleoside-diphosphate sugar epimerase/dehydratase
Rhodanobacter sp000427505 FW510-R12 0.17 LRK53_RS00475 DegT/DnrJ/EryC1/StrS family aminotransferase 0.30 LRK53_RS11300 polysaccharide biosynthesis protein low > 59

Not shown: 45 genomes with orthologs for CSW01_01285 only; 14 genomes with orthologs for CSW01_01350 only