| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13860 | | nitrogen regulation protein NR(II) | 1.0 | CSW01_01280 | | GDP-mannose 4,6-dehydratase | 0.78 | 9 |
| Escherichia coli ECOR38 | 0.55 | HEPCGN_12735 | glnL | nitrogen regulation protein NR(II) | 0.83 | HEPCGN_03045 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Escherichia coli BL21 | 0.55 | ECD_03754 | | sensory histidine kinase in two-component regulatory system with GlnG | 0.83 | ECD_01959 | | GDP-D-mannose dehydratase, NAD(P)-binding | low | > 61 |
| Escherichia coli ECRC99 | 0.55 | KEDOAH_14045 | glnL | nitrogen regulation protein NR(II) | 0.83 | KEDOAH_03710 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli BW25113 | 0.55 | b3869 | glnL | sensory histidine kinase in two-component regulatory system with GlnG (NCBI) | 0.83 | b2053 | gmd | GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) | low | > 76 |
| Escherichia coli ECRC98 | 0.55 | JDDGAC_17730 | glnL | nitrogen regulation protein NR(II) | 0.83 | JDDGAC_28550 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia fergusonii Becca | 0.55 | EFB2_04747 | | Sensory histidine kinase/phosphatase NtrB | 0.83 | EFB2_01801 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.55 | OHPLBJKB_04183 | | Sensory histidine kinase/phosphatase NtrB | 0.10 | OHPLBJKB_04266 | | dTDP-glucose 4,6-dehydratase 2 | low | > 74 |
| Escherichia coli Nissle 1917 | 0.55 | ECOLIN_RS22300 | | nitrogen regulation protein NR(II) | 0.82 | ECOLIN_RS12095 | | GDP-mannose 4,6-dehydratase | low | > 55 |
| Escherichia coli ECRC101 | 0.55 | MCAODC_04605 | glnL | nitrogen regulation protein NR(II) | 0.83 | MCAODC_20500 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC100 | 0.55 | OKFHMN_14105 | glnL | nitrogen regulation protein NR(II) | 0.83 | OKFHMN_24440 | | GDP-mannose 4,6-dehydratase | — | — |
| Escherichia coli ECRC62 | 0.55 | BNILDI_05295 | glnL | nitrogen regulation protein NR(II) | 0.83 | BNILDI_14585 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Escherichia coli ECRC102 | 0.55 | NIAGMN_11860 | glnL | nitrogen regulation protein NR(II) | 0.83 | NIAGMN_22385 | | GDP-mannose 4,6-dehydratase | low | > 80 |
| Escherichia coli ECOR27 | 0.55 | NOLOHH_06235 | glnL | nitrogen regulation protein NR(II) | 0.83 | NOLOHH_15675 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.55 | GFF2221 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.83 | GFF3875 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 78 |
| Rahnella sp. WP5 | 0.55 | EX31_RS15875 | | nitrogen regulation protein NR(II) | 0.52 | EX31_RS02865 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Enterobacter asburiae PDN3 | 0.54 | EX28DRAFT_4351 | | Signal transduction histidine kinase, nitrogen specific | 0.83 | EX28DRAFT_0502 | | GDP-mannose 4,6-dehydratase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.54 | MPMX20_04596 | | Sensory histidine kinase/phosphatase NtrB | 0.82 | MPMX20_03035 | | GDP-mannose 4,6-dehydratase | low | > 85 |
| Erwinia amylovora T8 | 0.54 | OLJFJH_05500 | | nitrogen regulation protein NR(II) | 0.10 | OLJFJH_12090 | | dTDP-glucose 4 6-dehydratase | — | — |
| Pantoea agglomerans CFBP13505 P0401 | 0.54 | PagCFBP13505_RS18890 | | nitrogen regulation protein NR(II) | 0.46 | PagCFBP13505_RS01140 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Pantoea sp. MT58 | 0.54 | IAI47_00455 | | nitrogen regulation protein NR(II) | 0.11 | IAI47_18500 | | dTDP-glucose 4,6-dehydratase | — | — |
| Dickeya dadantii 3937 | 0.53 | DDA3937_RS00130 | | nitrogen regulation protein NR(II) | 0.87 | DDA3937_RS18665 | | GDP-mannose 4,6-dehydratase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS21230 | | nitrogen regulation protein NR(II) | 0.87 | HGI48_RS18595 | | GDP-mannose 4,6-dehydratase | low | > 71 |
| Dickeya dianthicola ME23 | 0.52 | DZA65_RS22205 | | nitrogen regulation protein NR(II) | 0.87 | DZA65_RS19730 | | GDP-mannose 4,6-dehydratase | 0.54 | 28 |
| Pectobacterium carotovorum WPP14 | 0.51 | HER17_RS21435 | | nitrogen regulation protein NR(II) | 0.78 | HER17_RS14540 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_1610 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.39 | Pf1N1B4_1965 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_04945 | | Sensory histidine kinase/phosphatase NtrB | 0.40 | PFR28_04554 | | GDP-mannose 4,6-dehydratase | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_4821 | | PAS/PAC sensor signal transduction histidine kinase | 0.45 | Psyr_0916 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_3825 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.40 | Pf6N2E2_4242 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_09725 | | histidine kinase | 0.40 | AO356_11835 | | GDP-mannose 4,6-dehydratase | low | > 104 |
| Pseudomonas sp. DMC3 | 0.45 | GFF4080 | | Sensory histidine kinase/phosphatase NtrB | 0.40 | GFF545 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Pseudomonas putida KT2440 | 0.44 | PP_5047 | | two-component system sensory histidine kinase/phosphatase GlnL/GlnG | 0.46 | PP_1799 | | GDP-mannose 4,6-dehydratase | low | > 96 |
| Pseudomonas aeruginosa PA14 | 0.44 | IKLFDK_27900 | | two-component system sensor histidine kinase NtrB | 0.39 | IKLFDK_26150 | | GDP-mannose 4 6-dehydratase | low | > 98 |
| Pseudomonas fluorescens GW456-L13 | 0.44 | PfGW456L13_346 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.40 | PfGW456L13_2338 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 87 |
| Pseudomonas aeruginosa MRSN321 | 0.44 | DY961_RS11450 | ntrB;inference=COORDINATES | two-component system sensor histidine kinase NtrB | 0.39 | DY961_RS25555 | gmd;go_function=GDP-mannose | GDP-mannose 4 6-dehydratase | low | > 100 |
| Pseudomonas lactucae CFBP13502 | 0.44 | GEMAOFIL_00548 | | Sensory histidine kinase/phosphatase NtrB | 0.46 | GEMAOFIL_04278 | | GDP-mannose 4,6-dehydratase | low | > 96 |
| Pseudomonas aeruginosa PUPa3 | 0.44 | DQ20_RS50650 | ntrB;inference=COORDINATES | two-component system sensor histidine kinase NtrB | 0.39 | DQ20_RS58005 | gmd;go_function=GDP-mannose | GDP-mannose 4 6-dehydratase | low | > 101 |
| Pseudomonas segetis P6 | 0.44 | MPMX49_04286 | | Sensory histidine kinase/phosphatase NtrB | 0.43 | MPMX49_00388 | | GDP-mannose 4,6-dehydratase | low | > 75 |
| Pseudomonas sp. S08-1 | 0.44 | OH686_10635 | | Nitrogen regulation protein NtrB | 0.40 | OH686_11980 | | GDP-mannose 4,6-dehydratase | low | > 80 |
| Pseudomonas sp. SVBP6 | 0.44 | COO64_RS13330 | glnL | nitrogen regulation protein NR(II) | 0.45 | COO64_RS06615 | gmd | GDP-mannose 4,6-dehydratase | low | > 93 |
| Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS01690 | | nitrogen regulation protein NR(II) | 0.77 | PFLU_RS17890 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_12150 | | histidine kinase | 0.42 | AO353_10245 | | GDP-mannose 4,6-dehydratase | low | > 101 |
| Pseudomonas stutzeri RCH2 | 0.43 | Psest_3931 | | Signal transduction histidine kinase, nitrogen specific | 0.83 | Psest_1818 | | GDP-mannose 4,6-dehydratase | low | > 67 |
| Dechlorosoma suillum PS | 0.40 | Dsui_1050 | | signal transduction histidine kinase, nitrogen specific | 0.71 | Dsui_0085 | | GDP-mannose 4,6-dehydratase | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS12985 | | histidine kinase | 0.76 | RR42_RS33235 | | GDP-mannose 4,6-dehydratase | 0.38 | 53 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_00453 | | two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL | 0.69 | H281DRAFT_04776 | | GDPmannose 4,6-dehydratase | low | > 103 |
| Ralstonia solanacearum PSI07 | 0.31 | RPSI07_RS17820 | | PAS domain-containing sensor histidine kinase | 0.47 | RPSI07_RS19840 | | GDP-mannose 4,6-dehydratase | low | > 81 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS05670 | | nitrogen regulation protein NR(II) | 0.70 | QEN71_RS26360 | | GDP-mannose 4,6-dehydratase | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.31 | BPHYT_RS12940 | | signal transduction histidine kinase | 0.69 | BPHYT_RS04000 | | GDP-mannose 4,6-dehydratase | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.31 | ABIE53_002805 | | two-component system nitrogen regulation sensor histidine kinase GlnL | 0.68 | ABIE53_000940 | | GDPmannose 4,6-dehydratase | low | > 113 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.30 | GFF5270 | | Nitrogen regulation protein NtrB (EC 2.7.13.3) | 0.78 | GFF2554 | | GDP-mannose 4,6-dehydratase (EC 4.2.1.47) | low | > 90 |
| Castellaniella sp019104865 MT123 | 0.30 | ABCV34_RS03535 | | nitrogen regulation protein NR(II) | 0.71 | ABCV34_RS12935 | | GDP-mannose 4,6-dehydratase | — | — |
| Bosea sp. OAE506 | 0.25 | ABIE41_RS16790 | | ATP-binding protein | 0.44 | ABIE41_RS02910 | | GDP-mannose 4,6-dehydratase | low | > 77 |
| Agrobacterium fabrum C58 | 0.25 | Atu1445 | | two component sensor kinase | 0.59 | Atu4789 | | GDP-mannose 4,6-dehydratase | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.24 | TX73_013415 | | nitrogen regulation protein NR(II) | 0.45 | TX73_020470 | | GDP-mannose 4,6-dehydratase | low | > 86 |
| Magnetospirillum magneticum AMB-1 | 0.24 | AMB_RS11945 | | PAS domain-containing sensor histidine kinase | 0.63 | AMB_RS05505 | | GDP-mannose 4,6-dehydratase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.24 | Dshi_1575 | | signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) | 0.63 | Dshi_4139 | | GDP-mannose 4,6-dehydratase (RefSeq) | low | > 64 |
| Azospirillum sp. SherDot2 | 0.23 | MPMX19_01111 | | Sensory histidine kinase/phosphatase NtrB | 0.63 | MPMX19_06644 | | GDP-mannose 4,6-dehydratase | low | > 112 |
| Azospirillum brasilense Sp245 | 0.23 | AZOBR_RS14425 | | ATPase | 0.44 | AZOBR_RS33465 | | GDP-mannose 4 6-dehydratase | low | > 97 |
| Caulobacter crescentus NA1000 | 0.23 | CCNA_01814 | | nitrogen regulation protein ntrB | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.23 | CCNA_01814 | | nitrogen regulation protein ntrB | 0.63 | CCNA_00472 | | GDP-mannose 4,6 dehydratase | low | > 67 |
| Rhodospirillum rubrum S1H | 0.23 | Rru_A1677 | | Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) | 0.63 | Rru_A0253 | | GDP-mannose 4,6-dehydratase (NCBI) | low | > 58 |
| Rhodanobacter sp. FW510-T8 | 0.22 | OKGIIK_14470 | | PAS domain-containing sensor histidine kinase | 0.44 | OKGIIK_01210 | gmd | GDP-mannose 4,6-dehydratase | low | > 53 |
| Rhodanobacter denitrificans FW104-10B01 | 0.21 | LRK54_RS07985 | | ATP-binding protein | 0.15 | LRK54_RS05640 | | GDP-mannose 4,6-dehydratase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.21 | LRK55_RS07735 | | ATP-binding protein | 0.68 | LRK55_RS03650 | | GDP-mannose 4,6-dehydratase | low | > 63 |
| Phaeobacter inhibens DSM 17395 | 0.21 | PGA1_c14780 | | nitrogen regulation protein NtrB | 0.81 | PGA1_65p00310 | | GDP-mannose 4,6-dehydratase Gmd | — | — |
Not shown: 27 genomes with orthologs for CSW01_13860 only; 22 genomes with orthologs for CSW01_01280 only