Conservation of cofitness between CSW01_11440 and CSW01_01245 in Vibrio cholerae E7946 ATCC 55056

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11440 ribonuclease HII 1.0 CSW01_01245 lipopolysaccharide heptosyltransferase II 0.69 17
Enterobacter sp. TBS_079 0.70 MPMX20_00867 Ribonuclease HII 0.49 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 — —
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3771 RNase HII (EC 3.1.26.4) 0.50 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II — —
Klebsiella pneumoniae MKP103 0.68 KDGMDA_13530 lipid-A-disaccharide synthase 0.45 KDGMDA_07950 ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli BW25113 0.68 b0183 rnhB ribonuclease HII (NCBI) 0.50 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) 0.17 60
Escherichia coli ECOR27 0.68 NOLOHH_02485 rnhB ribonuclease HII 0.50 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF 0.36 38
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03480 Ribonuclease HII 0.50 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECRC62 0.68 BNILDI_09185 rnhB ribonuclease HII 0.50 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC99 0.67 KEDOAH_18015 rnhB ribonuclease HII 0.50 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC101 0.67 MCAODC_00655 rnhB ribonuclease HII 0.50 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 88
Escherichia coli ECOR38 0.67 HEPCGN_08095 rnhB ribonuclease HII 0.50 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 88
Escherichia coli ECRC98 0.67 JDDGAC_13735 rnhB ribonuclease HII 0.50 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 87
Escherichia coli ECRC102 0.67 NIAGMN_07990 rnhB ribonuclease HII 0.50 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 80
Escherichia coli ECRC100 0.67 OKFHMN_10140 rnhB ribonuclease HII 0.50 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 79
Escherichia fergusonii Becca 0.67 EFB2_03861 Ribonuclease HII 0.50 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 — —
Klebsiella michiganensis M5al 0.67 BWI76_RS05285 ribonuclease HII 0.49 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS00995 ribonuclease HII 0.50 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola 67-19 0.66 HGI48_RS05185 ribonuclease HII 0.49 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dadantii 3937 0.66 DDA3937_RS05185 ribonuclease HII 0.50 DDA3937_RS20445 ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli BL21 0.66 ECD_00181 ribonuclease HII 0.50 ECD_03477 ADP-heptose:LPS heptosyltransferase II — —
Dickeya dianthicola ME23 0.66 DZA65_RS05525 ribonuclease HII 0.49 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF39 Ribonuclease HII (EC 3.1.26.4) 0.50 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) low > 78
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS13545 ribonuclease HII 0.48 PagCFBP13505_RS18660 ADP-heptose--LPS heptosyltransferase RfaF — —
Serratia liquefaciens MT49 0.65 IAI46_20190 ribonuclease HII 0.49 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS16265 ribonuclease HII 0.51 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF low > 75
Rahnella sp. WP5 0.65 EX31_RS12965 ribonuclease HII 0.50 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF low > 89
Pantoea sp. MT58 0.65 IAI47_15460 ribonuclease HII 0.48 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia amylovora T8 0.64 OLJFJH_00560 ribonuclease HII 0.49 OLJFJH_05880 ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila SCR3 0.63 LU632_RS19895 rnhB ribonuclease HII 0.48 LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_15250 rnhB ribonuclease HII 0.48 IJEDHG_07865 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4694 Ribonuclease HII (EC 3.1.26.4) 0.53 PfGW456L13_212 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas aeruginosa PA14 0.56 IKLFDK_18595 ribonuclease HII 0.51 IKLFDK_28475 heptosyltransferase I — —
Pseudomonas segetis P6 0.56 MPMX49_03448 Ribonuclease HII 0.53 MPMX49_04208 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas sp. DMC3 0.56 GFF2067 Ribonuclease HII 0.53 GFF3156 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_3098 Ribonuclease HII (EC 3.1.26.4) 0.53 Pf1N1B4_1473 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_16530 ribonuclease HII 0.53 AO353_12875 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS06345 ribonuclease HII 0.53 PFLU_RS02285 lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_05970 ribonuclease HII 0.53 AO356_08950 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas fluorescens SBW25 0.55 PFLU_RS06345 ribonuclease HII 0.53 PFLU_RS02285 lipopolysaccharide heptosyltransferase II — —
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_01426 Ribonuclease HII 0.53 GEMAOFIL_00682 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas sp. RS175 0.55 PFR28_00410 Ribonuclease HII 0.53 PFR28_05063 ADP-heptose--LPS heptosyltransferase 2 — —
Pseudomonas simiae WCS417 0.55 PS417_06280 ribonuclease HII 0.53 PS417_02230 ADP-heptose--LPS heptosyltransferase — —
Dechlorosoma suillum PS 0.55 Dsui_2680 ribonuclease HII 0.39 Dsui_3341 lipopolysaccharide heptosyltransferase II — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3055 Ribonuclease HII (EC 3.1.26.4) 0.54 Pf6N2E2_3671 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) — —
Pseudomonas stutzeri RCH2 0.54 Psest_2828 Ribonuclease HII 0.53 Psest_0451 lipopolysaccharide heptosyltransferase II — —
Pseudomonas putida KT2440 0.54 PP_1605 Ribonuclease HII 0.55 PP_0341 ADP-heptose:LPS heptosyltransferase II — —
Pseudomonas sp. BP01 0.54 JOY50_RS23670 rnhB ribonuclease HII 0.54 JOY50_RS17820 waaF lipopolysaccharide heptosyltransferase II — —
Pseudomonas sp. S08-1 0.54 OH686_06415 Ribonuclease HII 0.53 OH686_09690 lipopolysaccharide heptosyltransferase II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1357 RNase HII 0.54 Psyr_0520 Glycosyl transferase, family 9 — —
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1357 RNase HII 0.54 Psyr_0520 Glycosyl transferase, family 9 — —
Pseudomonas sp. SVBP6 0.53 COO64_RS19710 rnhB ribonuclease HII 0.54 COO64_RS22830 waaF lipopolysaccharide heptosyltransferase II — —
Ralstonia solanacearum GMI1000 0.51 RS_RS07115 ribonuclease HII 0.38 RS_RS02830 lipopolysaccharide heptosyltransferase II — —
Methylophilus sp. DMC18 0.50 GFF1013 Ribonuclease HII 0.49 GFF294 ADP-heptose--LPS heptosyltransferase 2 — —
Ralstonia solanacearum PSI07 0.50 RPSI07_RS17030 ribonuclease HII 0.37 RPSI07_RS21185 lipopolysaccharide heptosyltransferase II — —
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS00445 ribonuclease HII 0.38 RALBFv3_RS12145 lipopolysaccharide heptosyltransferase II — —
Ralstonia solanacearum UW163 0.50 UW163_RS13775 ribonuclease HII 0.38 UW163_RS01465 lipopolysaccharide heptosyltransferase II — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS11895 ribonuclease HII 0.39 ABZR87_RS08040 lipopolysaccharide heptosyltransferase II low > 80
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS11805 ribonuclease HII 0.39 RR42_RS03165 ADP-heptose--LPS heptosyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.41 BT3412 ribonuclease HII (NCBI ptt file) 0.10 BT3362 heptosyltransferase (NCBI ptt file) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_00195 ribonuclease HII 0.13 CA264_20400 heptosyltransferase 0.34 16
Desulfovibrio vulgaris Hildenborough JW710 0.38 DVU0834 rnhB ribonuclease HII (TIGR) 0.11 DVU1055 heptosyltransferase family protein (TIGR) — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS20300 ribonuclease HII 0.08 AZOBR_RS06275 heptosyltransferase — —
Azospirillum sp. SherDot2 0.37 MPMX19_05650 Ribonuclease HII 0.09 MPMX19_04967 ADP-heptose--LPS heptosyltransferase 2 — —
Rhodospirillum rubrum S1H 0.36 Rru_A3209 Ribonuclease H (NCBI) 0.10 Rru_A2230 Glycosyl transferase, family 9 (NCBI) — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS20190 ribonuclease HII 0.12 AMB_RS02720 glycosyltransferase family 9 protein — —
Fusobacterium nucleatum SB010 0.35 HUW76_08570 ribonuclease HII 0.13 HUW76_07360 glycosyltransferase family 9 protein — —
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_0879 rhnB RNase HII 0.09 Synpcc7942_0682 hypothetical protein — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.33 ABZR88_RS22230 ribonuclease HII 0.10 ABZR88_RS13940 glycosyltransferase family 9 protein low > 71
Desulfovibrio vulgaris Miyazaki F 0.29 DvMF_2882 Ribonuclease H (RefSeq) 0.11 DvMF_3136 lipopolysaccharide heptosyltransferase II (RefSeq) — —

Not shown: 41 genomes with orthologs for CSW01_11440 only; 6 genomes with orthologs for CSW01_01245 only