| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07570 | | nucleotide-binding protein | 1.0 | CSW01_00655 | | 2-haloalkanoic acid dehalogenase | 0.53 | 20 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_0782 | | putative nucleotide-binding protein (RefSeq) | 0.31 | Shewana3_0394 | | HAD family hydrolase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.64 | SO3815 | | conserved hypothetical protein (NCBI ptt file) | 0.32 | SO4305 | | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file) | low | > 76 |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS06410 | | YajQ family cyclic di-GMP-binding protein | 0.45 | BWI76_RS01215 | | flavin mononucleotide phosphatase | — | — |
| Shewanella amazonensis SB2B | 0.63 | Sama_2557 | | putative nucleotide-binding protein (RefSeq) | 0.32 | Sama_3246 | | HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (RefSeq) | low | > 62 |
| Escherichia coli ECRC99 | 0.62 | KEDOAH_19575 | yajQ | nucleotide binding protein YajQ | 0.42 | KEDOAH_13735 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.62 | OHPLBJKB_03250 | | hypothetical protein | 0.42 | OHPLBJKB_04238 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 74 |
| Escherichia coli ECRC101 | 0.62 | MCAODC_27615 | yajQ | nucleotide binding protein YajQ | 0.42 | MCAODC_04920 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 87 |
| Escherichia coli ECOR38 | 0.62 | HEPCGN_07020 | yajQ | nucleotide binding protein YajQ | 0.42 | HEPCGN_13120 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 88 |
| Escherichia coli Nissle 1917 | 0.62 | ECOLIN_RS02565 | | nucleotide binding protein YajQ | 0.42 | ECOLIN_RS21880 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli BW25113 | 0.62 | b0426 | yajQ | orf, hypothetical protein (VIMSS) | 0.42 | b3812 | yigB | predicted hydrolase (NCBI) | low | > 76 |
| Dickeya dadantii 3937 | 0.62 | DDA3937_RS05560 | | YajQ family cyclic di-GMP-binding protein | 0.36 | DDA3937_RS19885 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 74 |
| Escherichia coli ECRC102 | 0.62 | NIAGMN_06445 | yajQ | nucleotide binding protein YajQ | 0.42 | NIAGMN_12170 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 80 |
| Escherichia coli ECRC100 | 0.62 | OKFHMN_08390 | yajQ | nucleotide binding protein YajQ | 0.42 | OKFHMN_14415 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli ECRC98 | 0.62 | JDDGAC_12045 | yajQ | nucleotide binding protein YajQ | 0.42 | JDDGAC_18040 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 87 |
| Escherichia coli ECRC62 | 0.62 | BNILDI_22755 | yajQ | nucleotide binding protein YajQ | 0.42 | BNILDI_04990 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 75 |
| Escherichia fergusonii Becca | 0.62 | EFB2_03631 | | hypothetical protein | 0.42 | EFB2_04825 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 86 |
| Escherichia coli ECOR27 | 0.62 | NOLOHH_01340 | yajQ | nucleotide binding protein YajQ | 0.42 | NOLOHH_06545 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 76 |
| Dickeya dianthicola 67-19 | 0.62 | HGI48_RS05620 | | YajQ family cyclic di-GMP-binding protein | 0.37 | HGI48_RS20040 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Escherichia coli BL21 | 0.62 | ECD_00374 | | phage Phi6 host factor, ATP/GTP binding protein | 0.42 | ECD_03688 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis | low | > 61 |
| Enterobacter asburiae PDN3 | 0.62 | EX28DRAFT_2545 | | Uncharacterized protein conserved in bacteria | 0.43 | EX28DRAFT_4481 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | low | > 76 |
| Serratia liquefaciens MT49 | 0.62 | IAI46_04955 | | YajQ family cyclic di-GMP-binding protein | 0.43 | IAI46_00730 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 87 |
| Enterobacter sp. TBS_079 | 0.62 | MPMX20_01017 | | hypothetical protein | 0.42 | MPMX20_04464 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS15905 | | YajQ family cyclic di-GMP-binding protein | 0.42 | HER17_RS01355 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 75 |
| Dickeya dianthicola ME23 | 0.62 | DZA65_RS05945 | | YajQ family cyclic di-GMP-binding protein | 0.37 | DZA65_RS21085 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 75 |
| Rahnella sp. WP5 | 0.61 | EX31_RS22185 | | YajQ family cyclic di-GMP-binding protein | 0.39 | EX31_RS15170 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 89 |
| Klebsiella pneumoniae MKP103 | 0.61 | KDGMDA_14505 | | YajQ family cyclic di-GMP-binding protein | 0.43 | KDGMDA_09705 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 95 |
| Shewanella loihica PV-4 | 0.61 | Shew_2893 | | nucleotide-binding protein (RefSeq) | 0.35 | Shew_0326 | | HAD family hydrolase (RefSeq) | low | > 60 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.60 | GFF4337 | | FIG001943: hypothetical protein YajQ | 0.43 | GFF240 | | 'Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase' transl_table=11 | low | > 78 |
| Erwinia amylovora T8 | 0.60 | OLJFJH_18035 | | YajQ family cyclic di-GMP-binding protein | 0.44 | OLJFJH_06420 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 58 |
| Pantoea sp. MT58 | 0.60 | IAI47_14710 | | YajQ family cyclic di-GMP-binding protein | 0.43 | IAI47_18395 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.60 | MIT1002_04129 | | putative nucleotide-binding protein | 0.28 | MIT1002_00156 | | Flavin mononucleotide phosphatase YigB | low | > 70 |
| Pantoea agglomerans CFBP13505 P0401 | 0.60 | PagCFBP13505_RS10485 | | YajQ family cyclic di-GMP-binding protein | 0.42 | PagCFBP13505_RS15375 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.60 | IJEDHG_16340 | | YajQ family cyclic di-GMP-binding protein | 0.45 | IJEDHG_08775 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.60 | LU632_RS18450 | | YajQ family cyclic di-GMP-binding protein | 0.45 | LU632_RS24130 | yigB | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 73 |
| Pseudomonas aeruginosa PA14 | 0.55 | IKLFDK_02120 | | YajQ family cyclic di-GMP-binding protein | 0.27 | IKLFDK_27045 | | HAD family hydrolase | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.55 | DQ20_RS56960 | | YajQ family cyclic di-GMP-binding protein | 0.27 | DQ20_RS49835 | | HAD family hydrolase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.55 | DY961_RS24510 | | YajQ family cyclic di-GMP-binding protein | 0.27 | DY961_RS12290 | | HAD family hydrolase | low | > 100 |
| Pseudomonas sp. S08-1 | 0.53 | OH686_08210 | | UPF0234 protein Yitk | 0.26 | OH686_13780 | | 2-haloalkanoic acid dehalogenase | low | > 80 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_22510 | | nucleotide-binding protein | 0.30 | PS417_27600 | | HAD family hydrolase | — | — |
| Pseudomonas putida KT2440 | 0.52 | PP_1352 | | UPF0234 protein PP_1352 | 0.28 | PP_5231 | | putative (S)-2-haloacid dehalogenase | low | > 96 |
| Pseudomonas lactucae CFBP13502 | 0.52 | GEMAOFIL_04654 | | hypothetical protein | 0.31 | GEMAOFIL_05658 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 96 |
| Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS24150 | | YajQ family cyclic di-GMP-binding protein | 0.31 | PFLU_RS29285 | | HAD-IA family hydrolase | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS24150 | | YajQ family cyclic di-GMP-binding protein | 0.31 | PFLU_RS29285 | | HAD-IA family hydrolase | low | > 109 |
| Pseudomonas sp. BP01 | 0.52 | JOY50_RS15035 | | YajQ family cyclic di-GMP-binding protein | 0.29 | JOY50_RS22615 | | HAD family hydrolase | low | > 84 |
| Dyella japonica UNC79MFTsu3.2 | 0.52 | ABZR86_RS00410 | | YajQ family cyclic di-GMP-binding protein | 0.21 | ABZR86_RS17535 | | HAD family hydrolase | low | > 74 |
| Pseudomonas sp. RS175 | 0.52 | PFR28_03425 | | hypothetical protein | 0.27 | PFR28_04379 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 88 |
| Pseudomonas orientalis W4I3 | 0.52 | QF045_RS24675 | | YajQ family cyclic di-GMP-binding protein | 0.30 | QF045_RS01965 | | HAD-IA family hydrolase | low | > 93 |
| Lysobacter sp. OAE881 | 0.52 | ABIE51_RS18465 | | YajQ family cyclic di-GMP-binding protein | 0.27 | ABIE51_RS03240 | | HAD-IA family hydrolase | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_1142 | | Uncharacterized protein conserved in bacteria | 0.26 | Psest_3768 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | low | > 67 |
| Pseudomonas sp. SVBP6 | 0.51 | COO64_RS11975 | | YajQ family cyclic di-GMP-binding protein | 0.29 | COO64_RS01275 | | HAD family hydrolase | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_650 | | FIG001943: hypothetical protein YajQ | 0.28 | Pf1N1B4_2170 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | low | > 87 |
| Pseudomonas segetis P6 | 0.51 | MPMX49_03784 | | hypothetical protein | 0.26 | MPMX49_04537 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 75 |
| Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_03640 | | nucleotide-binding protein | 0.28 | AO353_09055 | | HAD family hydrolase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_17960 | | nucleotide-binding protein | 0.27 | AO356_12720 | | HAD family hydrolase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.51 | PfGW456L13_1840 | | FIG001943: hypothetical protein YajQ | 0.29 | PfGW456L13_841 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_5522 | | FIG001943: hypothetical protein YajQ | 0.27 | Pf6N2E2_4415 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | low | > 103 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.50 | Psyr_4087 | | Protein of unknown function DUF520 | 0.27 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.50 | Psyr_4087 | | Protein of unknown function DUF520 | 0.27 | Psyr_0186 | | HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 | low | > 86 |
| Rhodanobacter sp000427505 FW510-R12 | 0.50 | LRK53_RS13920 | | YajQ family cyclic di-GMP-binding protein | 0.23 | LRK53_RS17730 | | HAD family hydrolase | low | > 59 |
| Pseudomonas sp. DMC3 | 0.50 | GFF5198 | | hypothetical protein | 0.29 | GFF371 | | 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB | low | > 89 |
| Rhodanobacter denitrificans FW104-10B01 | 0.49 | LRK54_RS14675 | | YajQ family cyclic di-GMP-binding protein | 0.23 | LRK54_RS06440 | | HAD family hydrolase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.49 | LRK55_RS14390 | | YajQ family cyclic di-GMP-binding protein | 0.23 | LRK55_RS06185 | | HAD family hydrolase | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.49 | OKGIIK_03500 | yajQ | YajQ family cyclic di-GMP-binding protein | 0.23 | OKGIIK_00140 | yigB | HAD family hydrolase | low | > 53 |
| Acidovorax sp. GW101-3H11 | 0.49 | Ac3H11_2620 | | FIG001943: hypothetical protein YajQ | 0.22 | Ac3H11_108 | | Hydrolase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.4605.1 | | FIG001943: hypothetical protein YajQ | 0.26 | Xcc-8004.4953.1 | | Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase | low | > 74 |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS21685 | | YajQ family cyclic di-GMP-binding protein | 0.21 | ABID97_RS17655 | | HAD-IA family hydrolase | — | — |
| Variovorax sp. SCN45 | 0.48 | GFF3099 | | UPF0234 protein Yitk | 0.22 | GFF502 | | Hydrolase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS07165 | | nucleotide-binding protein | 0.20 | HSERO_RS03050 | | hydrolase | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.45 | GFF292 | | FIG001943: hypothetical protein YajQ | 0.19 | GFF5114 | | Hydrolase | — | — |
Not shown: 27 genomes with orthologs for CSW01_07570 only; 0 genomes with orthologs for CSW01_00655 only