Conservation of cofitness between CSW01_16825 and CSW01_00015 in Vibrio cholerae E7946 ATCC 55056

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16825 1-phosphofructokinase 1.0 CSW01_00015 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.84 4
Pectobacterium carotovorum WPP14 0.46 HER17_RS12860 1-phosphofructokinase 0.75 HER17_RS21825 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Pantoea sp. MT58 0.46 IAI47_06655 1-phosphofructokinase 0.73 IAI47_18830 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 76
Erwinia tracheiphila SCR3 0.45 LU632_RS17320 fruK 1-phosphofructokinase 0.73 LU632_RS25300 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_0395 1-phosphofructokinase 0.75 EX28DRAFT_3993 tRNA modification GTPase TrmE — —
Dickeya dadantii 3937 0.45 DDA3937_RS09235 1-phosphofructokinase 0.76 DDA3937_RS21310 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.50 57
Dickeya dianthicola 67-19 0.45 HGI48_RS09265 1-phosphofructokinase 0.75 HGI48_RS21710 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 0.60 36
Enterobacter sp. TBS_079 0.45 MPMX20_03132 Tagatose-6-phosphate kinase 0.75 MPMX20_04650 tRNA modification GTPase MnmE low > 85
Escherichia coli ECRC98 0.44 JDDGAC_27400 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 JDDGAC_18605 tRNA modification GTPase MnmE — —
Escherichia coli ECRC101 0.44 MCAODC_14490 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 MCAODC_05495 tRNA modification GTPase MnmE — —
Escherichia coli ECRC102 0.44 NIAGMN_21205 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 NIAGMN_12740 tRNA modification GTPase MnmE — —
Escherichia coli Nissle 1917 0.44 ECOLIN_RS12680 1-phosphofructokinase 0.76 ECOLIN_RS21345 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 55
Escherichia coli ECOR38 0.44 HEPCGN_22705 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 HEPCGN_13680 tRNA modification GTPase MnmE low > 87
Escherichia coli BW25113 0.44 b2168 fruK 1-phosphofructokinase (NCBI) 0.76 b3706 trmE tRNA modification GTPase (NCBI) low > 76
Escherichia coli BL21 0.44 ECD_02097 fructose-1-phosphate kinase 0.76 ECD_03590 tRNA U34 5-methylaminomethyl-2-thiouridine modification GTPase low > 61
Escherichia coli ECRC100 0.44 OKFHMN_23440 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 OKFHMN_14985 tRNA modification GTPase MnmE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_01542 Tagatose-6-phosphate kinase 0.76 OHPLBJKB_04346 tRNA modification GTPase MnmE — —
Escherichia fergusonii Becca 0.44 EFB2_01689 Tagatose-6-phosphate kinase 0.76 EFB2_04925 tRNA modification GTPase MnmE 0.49 39
Escherichia coli ECOR27 0.44 NOLOHH_15015 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 NOLOHH_07125 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Escherichia coli ECRC62 0.44 BNILDI_13935 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 BNILDI_04405 tRNA modification GTPase MnmE low > 75
Escherichia coli ECRC99 0.44 KEDOAH_04745 fruB fused PTS fructose transporter subunit IIA/HPr protein 0.76 KEDOAH_13165 tRNA modification GTPase MnmE — —
Dickeya dianthicola ME23 0.44 DZA65_RS09570 1-phosphofructokinase 0.75 DZA65_RS22695 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 75
Klebsiella michiganensis M5al 0.44 BWI76_RS19730 1-phosphofructokinase 0.77 BWI76_RS00050 tRNA modification GTPase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF3772 1-phosphofructokinase (EC 2.7.1.56) 0.76 GFF1750 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 78
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_1145 1-phosphofructokinase (EC 2.7.1.56) 0.64 Pf1N1B4_1933 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas sp. DMC3 0.44 GFF5004 Tagatose-6-phosphate kinase 0.64 GFF573 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_05480 1-phosphofructokinase 0.64 AO353_10455 tRNA modification GTPase MnmE — —
Erwinia amylovora T8 0.43 OLJFJH_11775 1-phosphofructokinase 0.74 OLJFJH_05190 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Rahnella sp. WP5 0.43 EX31_RS19070 1-phosphofructokinase 0.75 EX31_RS06000 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 89
Pseudomonas sp. RS175 0.43 PFR28_00106 Tagatose-6-phosphate kinase 0.64 PFR28_04588 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_07330 1-phosphofructokinase (EC 2.7.1.56) (from data) 0.64 AO356_11660 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_5074 1-phosphofructokinase (EC 2.7.1.56) 0.64 PfGW456L13_670 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Serratia liquefaciens MT49 0.42 IAI46_17235 1-phosphofructokinase 0.75 IAI46_25250 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3338 1-phosphofructokinase (EC 2.7.1.56) 0.64 Pf6N2E2_4202 GTPase and tRNA-U34 5-formylation enzyme TrmE — —
Pseudomonas sp. SVBP6 0.42 COO64_RS11280 pfkB 1-phosphofructokinase 0.63 COO64_RS02085 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas stutzeri RCH2 0.41 Psest_3354 1-phosphofructokinase (EC 2.7.1.56) (from data) 0.64 Psest_4373 tRNA modification GTPase TrmE — —
Pseudomonas simiae WCS417 0.41 PS417_03970 1-phosphofructokinase 0.64 PS417_28540 tRNA modification GTPase MnmE — —
Pseudomonas fluorescens SBW25 0.40 PFLU_RS04015 1-phosphofructokinase 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS04015 1-phosphofructokinase 0.64 PFLU_RS30195 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas putida KT2440 0.39 PP_0794 1-phosphofructokinase monomer 0.65 PP_0005 GTPase — —
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0822 1-phosphofructokinase 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0822 1-phosphofructokinase 0.64 Psyr_5133 tRNA modification GTPase trmE low > 86
Pseudomonas sp. BP01 0.39 JOY50_RS19310 pfkB 1-phosphofructokinase 0.65 JOY50_RS08375 mnmE tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Pseudomonas aeruginosa PA14 0.39 IKLFDK_18175 1-phosphofructokinase 0.66 IKLFDK_25575 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Marinobacter adhaerens HP15 0.35 HP15_3724 1-phosphofructokinase 0.68 HP15_3698 tRNA modification GTPase TrmE — —
Rhodospirillum rubrum S1H 0.30 Rru_A1971 PfkB (NCBI) 0.26 Rru_A3624 tRNA modification GTPase TrmE (NCBI) — —
Azospirillum sp. SherDot2 0.30 MPMX19_05330 Tagatose-6-phosphate kinase 0.26 MPMX19_02568 tRNA modification GTPase MnmE — —
Azospirillum brasilense Sp245 0.30 AZOBR_RS30840 hypothetical protein 0.27 AZOBR_RS01805 tRNA modification GTPase TrmE low > 97
Ralstonia solanacearum PSI07 0.29 RPSI07_RS10875 1-phosphofructokinase 0.49 RPSI07_RS23950 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS06365 1-phosphofructokinase 0.49 RALBFv3_RS09410 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum UW163 0.28 UW163_RS07260 1-phosphofructokinase 0.49 UW163_RS04170 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Ralstonia solanacearum GMI1000 0.28 RS_RS14315 1-phosphofructokinase 0.49 RS_RS00020 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Paraburkholderia graminis OAS925 0.27 ABIE53_004212 1-phosphofructokinase 0.50 ABIE53_000332 tRNA modification GTPase — —
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS02045 1-phosphofructokinase 0.49 ABZR87_RS05350 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 80
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.2175.1 1-phosphofructokinase (EC 2.7.1.56) 0.41 Xcc-8004.5407.1 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 74
Fusobacterium nucleatum SB010 0.22 HUW76_08140 1-phosphofructokinase 0.27 HUW76_10755 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE — —
Cellulophaga baltica 18 0.18 M666_RS11830 1-phosphofructokinase family hexose kinase 0.30 M666_RS12855 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 67
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS20675 1-phosphofructokinase family hexose kinase 0.46 ABZR86_RS15115 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 74
Dinoroseobacter shibae DFL-12 0.17 Dshi_1621 PfkB domain protein (RefSeq) 0.28 Dshi_3454 tRNA modification GTPase TrmE (RefSeq) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_07445 phosphofructokinase 0.31 CA264_06625 tRNA modification GTPase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.15 Echvi_0157 hexose kinase, 1-phosphofructokinase family 0.32 Echvi_3509 tRNA modification GTPase TrmE — —
Acidovorax sp. GW101-3H11 0.14 Ac3H11_779 Tagatose-6-phosphate kinase (EC 2.7.1.144) / 1-phosphofructokinase (EC 2.7.1.56) 0.51 Ac3H11_4264 GTPase and tRNA-U34 5-formylation enzyme TrmE low > 79
Rhodopseudomonas palustris CGA009 0.14 TX73_001970 1-phosphofructokinase family hexose kinase 0.30 TX73_001535 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE low > 86

Not shown: 0 genomes with orthologs for CSW01_16825 only; 47 genomes with orthologs for CSW01_00015 only