Conservation of cofitness between CCNA_02601 and CCNA_01324 in Caulobacter crescentus NA1000 Δfur

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase 1.0 CCNA_01324 LSU ribosomal protein L30P 0.66 16
Caulobacter crescentus NA1000 1.00 CCNA_02601 glutathione-dependent formaldehyde dehydrogenase 1.00 CCNA_01324 LSU ribosomal protein L30P low > 66
Rhodopseudomonas palustris CGA009 0.88 TX73_010080 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.61 TX73_016715 50S ribosomal protein L30 — —
Sphingomonas koreensis DSMZ 15582 0.87 Ga0059261_1819 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.75 Ga0059261_3747 ribosomal protein L30, bacterial/organelle — —
Brevundimonas sp. GW460-12-10-14-LB2 0.85 A4249_RS00420 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.79 A4249_RS04000 50S ribosomal protein L30 — —
Sinorhizobium meliloti 1021 0.78 SMc01270 alcohol dehydrogenase 0.64 SMc01291 50S ribosomal protein L30 — —
Rhizobium sp. OAE497 0.77 ABIE40_RS09860 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.63 ABIE40_RS07945 50S ribosomal protein L30 — —
Dinoroseobacter shibae DFL-12 0.77 Dshi_0103 Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase (RefSeq) 0.60 Dshi_0303 ribosomal protein L30 (RefSeq) — —
Ralstonia solanacearum IBSBF1503 0.77 RALBFv3_RS12345 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.44 RALBFv3_RS07100 50S ribosomal protein L30 — —
Ralstonia solanacearum UW163 0.77 UW163_RS01260 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.44 UW163_RS06520 50S ribosomal protein L30 — —
Ralstonia solanacearum GMI1000 0.77 RS_RS17530 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 RS_RS15035 50S ribosomal protein L30 — —
Agrobacterium fabrum C58 0.76 Atu1670 alcohol dehydrogenase class III 0.62 Atu8065 50S ribosomal protein L30 — —
Ralstonia sp. UNC404CL21Col 0.76 ABZR87_RS08285 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.44 ABZR87_RS02750 50S ribosomal protein L30 — —
Ralstonia solanacearum PSI07 0.76 RPSI07_RS20965 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.44 RPSI07_RS10145 50S ribosomal protein L30 — —
Bosea sp. OAE506 0.76 ABIE41_RS09635 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.63 ABIE41_RS14640 50S ribosomal protein L30 — —
Cupriavidus basilensis FW507-4G11 0.75 RR42_RS25775 alcohol dehydrogenase 0.43 RR42_RS19165 50S ribosomal protein L30 — —
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04166 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase 0.42 H281DRAFT_05586 LSU ribosomal protein L30P — —
Paraburkholderia graminis OAS925 0.75 ABIE53_003402 S-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase 0.42 ABIE53_003768 large subunit ribosomal protein L30 — —
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS16150 alcohol dehydrogenase 0.42 BPHYT_RS18025 50S ribosomal protein L30 — —
Paraburkholderia sabiae LMG 24235 0.74 QEN71_RS02555 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.43 QEN71_RS28175 50S ribosomal protein L30 — —
Variovorax sp. OAS795 0.74 ABID97_RS10235 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 ABID97_RS01505 50S ribosomal protein L30 — —
Variovorax sp. SCN45 0.74 GFF2941 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.44 GFF5563 LSU ribosomal protein L30p (L7e) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.74 GFF3318 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.43 GFF2824 LSU ribosomal protein L30p (L7e) — —
Phaeobacter inhibens DSM 17395 0.74 PGA1_c02510 S-(hydroxymethyl)glutathione dehydrogenase FrmA 0.66 PGA1_c01780 50S ribosomal protein L30 — —
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS13615 alcohol dehydrogenase 0.44 HSERO_RS00660 50S ribosomal protein L30 — —
Azospirillum brasilense Sp245 0.69 AZOBR_RS16515 S-(hydroxymethyl)glutathione dehydrogenase 0.62 AZOBR_RS11380 50S ribosomal protein L30 — —
Marinobacter adhaerens HP15 0.67 HP15_4017 formaldehyde dehydrogenase (glutathione-dependent) 0.42 HP15_398 ribosomal protein L30, bacterial-type — —
Shewanella oneidensis MR-1 0.66 SO2054 adhC alcohol dehydrogenase class III (NCBI ptt file) 0.46 SO0249 rpmD ribosomal protein L30 (NCBI ptt file) — —
Erwinia tracheiphila SCR3 0.66 LU632_RS17270 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.39 LU632_RS22565 rpmD 50S ribosomal protein L30 — —
Acinetobacter radioresistens SK82 0.66 MPMX26_01472 S-(hydroxymethyl)glutathione dehydrogenase 0.43 MPMX26_02703 50S ribosomal protein L30 — —
Pantoea sp. MT58 0.66 IAI47_06705 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.43 IAI47_02210 50S ribosomal protein L30 — —
Shewanella sp. ANA-3 0.65 Shewana3_1837 alcohol dehydrogenase (RefSeq) 0.47 Shewana3_0217 rpmD 50S ribosomal protein L30 (RefSeq) — —
Serratia liquefaciens MT49 0.65 IAI46_07885 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.40 IAI46_23345 50S ribosomal protein L30 — —
Dickeya dadantii 3937 0.65 DDA3937_RS09325 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 DDA3937_RS19195 50S ribosomal protein L30 — —
Dickeya dianthicola ME23 0.65 DZA65_RS09655 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 DZA65_RS20415 50S ribosomal protein L30 — —
Rhodospirillum rubrum S1H 0.65 Rru_A3405 Formaldehyde dehydrogenase (glutathione) (NCBI) 0.58 Rru_A2670 Ribosomal protein L30 (NCBI) — —
Dickeya dianthicola 67-19 0.65 HGI48_RS09350 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 HGI48_RS19295 50S ribosomal protein L30 — —
Rahnella sp. WP5 0.65 EX31_RS18715 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 EX31_RS16050 50S ribosomal protein L30 — —
Shewanella loihica PV-4 0.65 Shew_1540 alcohol dehydrogenase (RefSeq) 0.43 Shew_0176 ribosomal protein L30 (RefSeq) — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1257 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.41 EX28DRAFT_0024 ribosomal protein L30, bacterial/organelle — —
Klebsiella michiganensis M5al 0.65 BWI76_RS13260 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.41 BWI76_RS25750 50S ribosomal protein L30 — —
Enterobacter sp. TBS_079 0.65 MPMX20_02209 S-(hydroxymethyl)glutathione dehydrogenase 0.41 MPMX20_04209 50S ribosomal protein L30 — —
Azospirillum sp. SherDot2 0.64 MPMX19_05326 S-(hydroxymethyl)glutathione dehydrogenase 0.59 MPMX19_00410 50S ribosomal protein L30 — —
Pectobacterium carotovorum WPP14 0.64 HER17_RS12790 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 0.42 HER17_RS02155 50S ribosomal protein L30 — —
Alteromonas macleodii MIT1002 0.64 MIT1002_03089 S-(hydroxymethyl)glutathione dehydrogenase 0.46 MIT1002_03593 50S ribosomal protein L30 — —
Shewanella amazonensis SB2B 0.63 Sama_0004 alcohol dehydrogenase, zinc-binding (RefSeq) 0.46 Sama_0231 50S ribosomal protein L30 (RefSeq) — —
Acidovorax sp. GW101-3H11 0.63 Ac3H11_3163 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.44 Ac3H11_806 LSU ribosomal protein L30p (L7e) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2617 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) 0.41 GFF2378 LSU ribosomal protein L30p (L7e) — —
Escherichia coli BW25113 0.60 b0356 frmA alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase (NCBI) 0.41 b3302 rpmD 50S ribosomal protein L30 (NCBI) — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS02210 S-(hydroxymethyl)glutathione dehydrogenase 0.41 ECOLIN_RS18945 50S ribosomal protein L30 — —
Escherichia coli BL21 0.60 ECD_00310 alcohol dehydrogenase class III; glutathione-dependent formaldehyde dehydrogenase 0.41 ECD_03153 50S ribosomal subunit protein L30 — —
Escherichia fergusonii Becca 0.60 EFB2_03694 S-(hydroxymethyl)glutathione dehydrogenase 0.41 EFB2_00521 50S ribosomal protein L30 — —
Escherichia coli ECRC102 0.60 NIAGMN_06795 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 NIAGMN_15220 rpmD 50S ribosomal protein L30 — —
Escherichia coli ECRC98 0.60 JDDGAC_12395 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 JDDGAC_21080 rpmD 50S ribosomal protein L30 — —
Escherichia coli ECRC99 0.60 KEDOAH_19230 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 KEDOAH_10690 rpmD 50S ribosomal protein L30 — —
Escherichia coli ECOR27 0.60 NOLOHH_01650 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 NOLOHH_09250 rpmD 50S ribosomal protein L30 — —
Escherichia coli ECRC100 0.60 OKFHMN_08740 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 OKFHMN_17450 rpmD 50S ribosomal protein L30 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_03314 S-(hydroxymethyl)glutathione dehydrogenase 0.41 OHPLBJKB_00401 50S ribosomal protein L30 — —
Escherichia coli ECOR38 0.60 HEPCGN_07365 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 HEPCGN_16280 rpmD 50S ribosomal protein L30 — —
Escherichia coli ECRC62 0.60 BNILDI_23065 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 BNILDI_02270 rpmD 50S ribosomal protein L30 — —
Escherichia coli ECRC101 0.60 MCAODC_27970 frmA S-(hydroxymethyl)glutathione dehydrogenase 0.41 MCAODC_07980 rpmD 50S ribosomal protein L30 — —

Not shown: 23 genomes with orthologs for CCNA_02601 only; 5 genomes with orthologs for CCNA_01324 only