Conservation of cofitness between CCNA_03464 and CCNA_01301 in Caulobacter crescentus NA1000 Δfur

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_03464 glycine cleavage system H protein 1.0 CCNA_01301 NAD-dependent formate dehydrogenase alpha subunit 0.66 18
Caulobacter crescentus NA1000 1.00 CCNA_03464 glycine cleavage system H protein 1.00 CCNA_01301 NAD-dependent formate dehydrogenase alpha subunit low > 66
Azospirillum sp. SherDot2 0.62 MPMX19_01030 Glycine cleavage system H protein 0.45 MPMX19_04868 Protein YdeP low > 112
Sphingomonas koreensis DSMZ 15582 0.60 Ga0059261_3257 glycine cleavage system H protein 0.50 Ga0059261_3868 oxidoreductase alpha (molybdopterin) subunit low > 68
Bosea sp. OAE506 0.58 ABIE41_RS22925 glycine cleavage system protein GcvH 0.43 ABIE41_RS15285 FdhF/YdeP family oxidoreductase low > 77
Variovorax sp. SCN45 0.57 GFF6477 Glycine cleavage system H protein 0.59 GFF6598 Putative formate dehydrogenase oxidoreductase protein — —
Pectobacterium carotovorum WPP14 0.55 HER17_RS18000 glycine cleavage system protein GcvH 0.47 HER17_RS09435 FdhF/YdeP family oxidoreductase low > 75
Agrobacterium fabrum C58 0.54 Atu1463 glycine cleavage system component H 0.58 Atu4776 formate dehydrogenase alpha subunit low > 89
Rhizobium sp. OAE497 0.54 ABIE40_RS09945 glycine cleavage system protein GcvH 0.45 ABIE40_RS28550 FdhF/YdeP family oxidoreductase low > 107
Escherichia coli ECOR38 0.54 HEPCGN_18815 gcvH glycine cleavage system protein GcvH 0.51 HEPCGN_26555 ydeP acid resistance putative oxidoreductase YdeP low > 87
Klebsiella michiganensis M5al 0.54 BWI76_RS23875 glycine cleavage system protein H 0.57 BWI76_RS13875 CbbBc protein low > 92
Escherichia coli BL21 0.53 ECD_02736 glycine cleavage complex lipoylprotein 0.51 ECD_01459 putative oxidoreductase low > 61
Escherichia coli ECRC101 0.53 MCAODC_10045 gcvH glycine cleavage system protein GcvH 0.51 MCAODC_16695 ydeP acid resistance putative oxidoreductase YdeP low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00811 Glycine cleavage system H protein 0.51 OHPLBJKB_02216 Protein YdeP low > 73
Escherichia coli ECRC100 0.53 OKFHMN_19525 gcvH glycine cleavage system protein GcvH 0.51 OKFHMN_01245 ydeP acid resistance putative oxidoreductase YdeP low > 80
Escherichia coli Nissle 1917 0.53 ECOLIN_RS16170 glycine cleavage system protein GcvH 0.51 ECOLIN_RS08610 acid resistance putative oxidoreductase YdeP low > 55
Escherichia coli ECRC102 0.53 NIAGMN_17290 gcvH glycine cleavage system protein GcvH 0.51 NIAGMN_25375 ydeP acid resistance putative oxidoreductase YdeP — —
Escherichia coli ECRC98 0.53 JDDGAC_23165 gcvH glycine cleavage system protein GcvH 0.51 JDDGAC_03735 ydeP acid resistance putative oxidoreductase YdeP low > 86
Escherichia fergusonii Becca 0.53 EFB2_00998 Glycine cleavage system H protein 0.51 EFB2_02499 Protein YdeP low > 86
Escherichia coli BW25113 0.53 b2904 gcvH glycine cleavage system protein H (NCBI) 0.51 b1501 YdeP putative oxidoreductase, major subunit, acid resistance protein (Katherine Huang) low > 76
Escherichia coli ECRC99 0.53 KEDOAH_08615 gcvH glycine cleavage system protein GcvH 0.51 KEDOAH_27195 ydeP acid resistance putative oxidoreductase YdeP — —
Escherichia coli ECRC62 0.52 BNILDI_09975 gcvH glycine cleavage system protein GcvH 0.52 BNILDI_17375 ydeP acid resistance putative oxidoreductase YdeP low > 75
Escherichia coli ECOR27 0.52 NOLOHH_11440 gcvH glycine cleavage system protein GcvH 0.51 NOLOHH_18885 ydeP acid resistance putative oxidoreductase YdeP low > 75
Ralstonia solanacearum PSI07 0.52 RPSI07_RS08580 glycine cleavage system protein H 0.56 RPSI07_RS04835 formate dehydrogenase low > 81
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS08655 glycine cleavage system protein H 0.56 RALBFv3_RS18760 formate dehydrogenase low > 76
Ralstonia solanacearum GMI1000 0.51 RS_RS16505 glycine cleavage system protein H 0.55 RS_RS17535 formate dehydrogenase oxidoreduct low > 80
Enterobacter sp. TBS_079 0.51 MPMX20_03763 Glycine cleavage system H protein 0.59 MPMX20_02683 Protein YdeP low > 85
Ralstonia solanacearum UW163 0.51 UW163_RS04955 glycine cleavage system protein H 0.56 UW163_RS20370 formate dehydrogenase — —
Paraburkholderia graminis OAS925 0.51 ABIE53_000237 glycine cleavage system H protein 0.55 ABIE53_002825 molybdopterin-dependent oxidoreductase alpha subunit low > 113
Enterobacter asburiae PDN3 0.51 EX28DRAFT_2956 glycine cleavage system H protein 0.59 EX28DRAFT_0785 oxidoreductase alpha (molybdopterin) subunit low > 76
Pantoea sp. MT58 0.51 IAI47_03770 glycine cleavage system protein GcvH 0.57 IAI47_21415 FdhF/YdeP family oxidoreductase low > 76
Rhodopseudomonas palustris CGA009 0.51 TX73_019930 glycine cleavage system protein GcvH 0.44 TX73_001975 FdhF/YdeP family oxidoreductase low > 86
Pseudomonas putida KT2440 0.51 PP_5193 glycine cleavage system H protein 2 0.51 PP_0256 putative oxidoreductase low > 96
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_02410 glycine cleavage system H protein 0.62 H281DRAFT_01420 oxidoreductase alpha (molybdopterin) subunit low > 103
Serratia liquefaciens MT49 0.50 IAI46_20855 glycine cleavage system protein GcvH 0.48 IAI46_13855 FdhF/YdeP family oxidoreductase low > 86
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS19325 glycine cleavage system H protein 0.54 BPHYT_RS13070 oxidoreductase molybdopterin subunit low > 109
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS03930 glycine cleavage system protein GcvH 0.56 ABZR87_RS19695 FdhF/YdeP family oxidoreductase low > 80
Rahnella sp. WP5 0.50 EX31_RS21515 glycine cleavage system protein GcvH 0.48 EX31_RS07150 FdhF/YdeP family oxidoreductase low > 89
Pseudomonas fluorescens FW300-N2E2 0.49 Pf6N2E2_4486 Glycine cleavage system H protein 0.51 Pf6N2E2_3891 Putative formate dehydrogenase oxidoreductase protein low > 103
Erwinia tracheiphila SCR3 0.49 LU632_RS05910 gcvH glycine cleavage system protein GcvH 0.46 LU632_RS12250 FdhF/YdeP family oxidoreductase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS00300 glycine cleavage system protein GcvH 0.42 ABZR88_RS07875 FdhF/YdeP family oxidoreductase — —
Pseudomonas fluorescens FW300-N2C3 0.48 AO356_13040 glycine cleavage system protein H 0.51 AO356_10105 CbbBc protein low > 104
Dickeya dadantii 3937 0.48 DDA3937_RS03250 glycine cleavage system protein GcvH 0.47 DDA3937_RS12475 FdhF/YdeP family oxidoreductase low > 74
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_2235 Glycine cleavage system H protein 0.50 Pf1N1B4_1674 Putative formate dehydrogenase oxidoreductase protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_08730 glycine cleavage system protein H 0.51 AO353_11825 CbbBc protein low > 101
Shewanella sp. ANA-3 0.46 Shewana3_3500 glycine cleavage system protein H (RefSeq) 0.45 Shewana3_1872 oxidoreductase alpha (molybdopterin) subunit (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.46 QEN71_RS29210 glycine cleavage system protein GcvH 0.59 QEN71_RS37510 FdhF/YdeP family oxidoreductase low > 153
Alteromonas macleodii MIT1002 0.46 MIT1002_02972 Glycine cleavage system H protein 0.51 MIT1002_01713 Formate dehydrogenase H low > 70
Pseudomonas fluorescens SBW25 0.46 PFLU_RS28910 glycine cleavage system protein GcvH 0.51 PFLU_RS01360 FdhF/YdeP family oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS28910 glycine cleavage system protein GcvH 0.51 PFLU_RS01360 FdhF/YdeP family oxidoreductase low > 109
Pseudomonas simiae WCS417 0.46 PS417_22355 glycine cleavage system protein H 0.51 PS417_01265 CbbBc protein low > 88
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS18880 glycine cleavage system protein GcvH 0.57 ABZR86_RS03585 FdhF/YdeP family oxidoreductase low > 74
Pseudomonas stutzeri RCH2 0.45 Psest_0182 glycine cleavage system H protein 0.51 Psest_2422 oxidoreductase alpha (molybdopterin) subunit low > 67
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_903 Glycine cleavage system H protein 0.51 PfGW456L13_409 Putative formate dehydrogenase oxidoreductase protein low > 87
Pseudomonas sp. RS175 0.45 PFR28_03382 Glycine cleavage system H protein 0.52 PFR28_04881 Protein YdeP low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_0247 glycine cleavage system H protein 0.52 Psyr_0015 Oxidoreductase alpha (molybdopterin) subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_0247 glycine cleavage system H protein 0.52 Psyr_0015 Oxidoreductase alpha (molybdopterin) subunit low > 86
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.1568.1 Glycine cleavage system H protein 0.53 Xcc-8004.2195.1 Putative formate dehydrogenase oxidoreductase protein low > 74
Lysobacter sp. OAE881 0.41 ABIE51_RS16360 glycine cleavage system protein GcvH 0.52 ABIE51_RS14790 FdhF/YdeP family oxidoreductase low > 62
Mycobacterium tuberculosis H37Rv 0.41 Rv1826 Probable glycine cleavage system H protein GcvH 0.43 Rv2900c Possible formate dehydrogenase H FdhF (formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide) (formate dehydrogenase-H alpha subunit) (FDH-H) — —
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS07915 glycine cleavage system protein H 0.57 HSERO_RS08385 anaerobic (selenocysteine-containing) formate dehydrogenase low > 78

Not shown: 39 genomes with orthologs for CCNA_03464 only; 0 genomes with orthologs for CCNA_01301 only