Conservation of cofitness between BPHYT_RS16975 and BPHYT_RS01595 in Burkholderia phytofirmans PsJN

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16975 shikimate 5-dehydrogenase 1.0 BPHYT_RS01595 homoserine O-acetyltransferase 0.72 18
Paraburkholderia graminis OAS925 0.93 ABIE53_003560 shikimate dehydrogenase 0.97 ABIE53_000414 homoserine O-acetyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.90 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.98 H281DRAFT_02214 homoserine O-acetyltransferase — —
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS27130 shikimate dehydrogenase 0.92 QEN71_RS00290 homoserine O-acetyltransferase 0.73 24
Ralstonia solanacearum PSI07 0.55 RPSI07_RS11300 shikimate dehydrogenase 0.82 RPSI07_RS23815 homoserine O-acetyltransferase 0.79 5
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS05945 shikimate dehydrogenase 0.83 RALBFv3_RS09535 homoserine O-acetyltransferase 0.53 5
Ralstonia solanacearum UW163 0.54 UW163_RS07680 shikimate dehydrogenase 0.83 UW163_RS04045 homoserine O-acetyltransferase — —
Ralstonia solanacearum GMI1000 0.54 RS_RS13890 shikimate dehydrogenase 0.83 RS_RS00135 homoserine O-acetyltransferase 0.65 2
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS01605 shikimate dehydrogenase 0.81 ABZR87_RS05200 homoserine O-acetyltransferase 0.68 3
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS01990 shikimate 5-dehydrogenase 0.76 HSERO_RS00455 homoserine O-acetyltransferase 0.78 6
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS17645 shikimate dehydrogenase 0.86 RR42_RS01160 homoserine O-acetyltransferase 0.86 8
Pseudomonas sp. S08-1 0.47 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.63 OH686_11000 homoserine O-acetyltransferase low > 80
Pseudomonas putida KT2440 0.47 PP_0074 shikimate 5-dehydrogenase 0.61 PP_5097 homoserine O-acetyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0025 shikimate dehydrogenase 0.63 Psyr_0474 homoserine O-acetyltransferase 0.65 15
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0025 shikimate dehydrogenase 0.63 Psyr_0474 homoserine O-acetyltransferase 0.68 10
Pseudomonas sp. RS175 0.46 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.63 PFR28_04245 Homoserine O-succinyltransferase — —
Pseudomonas simiae WCS417 0.45 PS417_00125 shikimate dehydrogenase 0.62 PS417_26740 homoserine acetyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_11315 shikimate dehydrogenase 0.62 AO356_13410 homoserine O-acetyltransferase 0.50 33
Pseudomonas fluorescens SBW25 0.45 PFLU_RS00120 shikimate dehydrogenase 0.62 PFLU_RS28385 homoserine O-acetyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.61 Pf6N2E2_4597 Homoserine O-acetyltransferase (EC 2.3.1.31) — —
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS00120 shikimate dehydrogenase 0.62 PFLU_RS28385 homoserine O-acetyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.62 Pf1N1B4_2338 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.54 28
Marinobacter adhaerens HP15 0.45 HP15_3750 shikimate dehydrogenase 0.63 HP15_284 homoserine O-acetyltransferase — —
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.63 PfGW456L13_1007 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.79 12
Castellaniella sp019104865 MT123 0.44 ABCV34_RS11630 shikimate dehydrogenase 0.70 ABCV34_RS10925 homoserine O-acetyltransferase low > 48
Pseudomonas stutzeri RCH2 0.44 Psest_0029 shikimate 5-dehydrogenase 0.62 Psest_0280 homoserine O-acetyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_10670 shikimate dehydrogenase 0.62 AO353_08180 homoserine O-acetyltransferase 0.76 10
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.71 Ac3H11_4277 Homoserine O-acetyltransferase (EC 2.3.1.31) 0.92 10
Variovorax sp. SCN45 0.35 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.70 GFF3265 Homoserine O-acetyltransferase (EC 2.3.1.31) low > 127
Acinetobacter radioresistens SK82 0.35 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.56 MPMX26_00403 Homoserine O-succinyltransferase 0.75 34
Variovorax sp. OAS795 0.34 ABID97_RS06300 shikimate dehydrogenase 0.72 ABID97_RS02600 homoserine O-acetyltransferase — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.27 Xcc-8004.2337.1 Homoserine O-acetyltransferase (EC 2.3.1.31) low > 74
Lysobacter sp. OAE881 0.29 ABIE51_RS01815 shikimate dehydrogenase 0.29 ABIE51_RS08680 homoserine O-acetyltransferase — —
Rhodopseudomonas palustris CGA009 0.21 TX73_022410 shikimate dehydrogenase 0.46 TX73_023025 homoserine O-acetyltransferase — —
Synechococcus elongatus PCC 7942 0.20 Synpcc7942_2467 aroE shikimate 5-dehydrogenase 0.11 Synpcc7942_1714 metX hypothetical protein — —
Rhodospirillum rubrum S1H 0.19 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI) 0.44 Rru_A3266 Homoserine O-acetyltransferase (NCBI) — —
Azospirillum sp. SherDot2 0.19 MPMX19_02560 Shikimate dehydrogenase (NADP(+)) 0.45 MPMX19_04391 Homoserine O-acetyltransferase — —
Bosea sp. OAE506 0.18 ABIE41_RS04650 shikimate dehydrogenase 0.44 ABIE41_RS23775 homoserine O-acetyltransferase — —
Azospirillum brasilense Sp245 0.18 AZOBR_RS01765 shikimate 5-dehydrogenase 0.44 AZOBR_RS20475 homoserine acetyltransferase — —
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_00003 shikimate 5-dehydrogenase 0.44 CCNA_00559 homoserine O-acetyltransferase low > 67
Caulobacter crescentus NA1000 0.17 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.44 CCNA_00559 homoserine O-acetyltransferase 0.83 58
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS20055 shikimate dehydrogenase 0.23 ABZR88_RS09555 homoserine O-acetyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_1145 Shikimate 5-dehydrogenase 0.25 Echvi_3285 homoserine O-acetyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.14 CA264_19075 shikimate dehydrogenase 0.24 CA264_02375 homoserine O-acetyltransferase — —
Magnetospirillum magneticum AMB-1 0.14 AMB_RS23010 shikimate dehydrogenase 0.44 AMB_RS20100 homoserine O-acetyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.13 CA265_RS19745 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.22 CA265_RS08175 homoserine O-acetyltransferase — —
Mycobacterium tuberculosis H37Rv 0.11 Rv2552c Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase) 0.27 Rv3341 Probable homoserine O-acetyltransferase MetA (homoserine O-trans-acetylase) (homoserine transacetylase) (HTA) — —

Not shown: 44 genomes with orthologs for BPHYT_RS16975 only; 8 genomes with orthologs for BPHYT_RS01595 only