Conservation of cofitness between BNILDI_11900 and BNILDI_18870 in Escherichia coli ECRC62

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11900 pdxJ pyridoxine 5'-phosphate synthase 1.0 BNILDI_18870 ldcA muramoyltetrapeptide carboxypeptidase 0.88 10
Escherichia coli ECRC98 1.00 JDDGAC_25090 pdxJ pyridoxine 5'-phosphate synthase 0.98 JDDGAC_06190 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli BW25113 1.00 b2564 pdxJ pyridoxal phosphate biosynthetic protein (NCBI) 0.99 b1192 ldcA L,D-carboxypeptidase A (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_11955 pdxJ pyridoxine 5'-phosphate synthase 0.98 MCAODC_21865 ldcA muramoyltetrapeptide carboxypeptidase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_19195 pdxJ pyridoxine 5'-phosphate synthase 0.98 NIAGMN_27915 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01143 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.99 OHPLBJKB_02496 Murein tetrapeptide carboxypeptidase — —
Escherichia coli ECOR27 1.00 NOLOHH_13100 pdxJ pyridoxine 5'-phosphate synthase 1.00 NOLOHH_20705 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli BL21 1.00 ECD_02458 pyridoxine 5'-phosphate synthase 0.99 ECD_01167 murein tetrapeptide carboxypeptidase; LD-carboxypeptidase A — —
Escherichia coli ECRC100 1.00 OKFHMN_21425 pdxJ pyridoxine 5'-phosphate synthase 0.98 OKFHMN_28320 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli ECRC99 1.00 KEDOAH_06795 pdxJ pyridoxine 5'-phosphate synthase 0.98 KEDOAH_25320 ldcA muramoyltetrapeptide carboxypeptidase — —
Escherichia coli ECOR38 0.99 HEPCGN_20570 pdxJ pyridoxine 5'-phosphate synthase 0.98 HEPCGN_24800 ldcA muramoyltetrapeptide carboxypeptidase low > 87
Escherichia fergusonii Becca 0.99 EFB2_01332 Pyridoxine 5'-phosphate synthase 0.99 EFB2_02740 Murein tetrapeptide carboxypeptidase low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14515 pyridoxine 5'-phosphate synthase 0.99 ECOLIN_RS07200 muramoyltetrapeptide carboxypeptidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF2472 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 0.83 GFF2801 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Klebsiella michiganensis M5al 0.94 BWI76_RS21305 pyridoxine 5'-phosphate synthase 0.73 BWI76_RS17720 muramoyltetrapeptide carboxypeptidase — —
Enterobacter asburiae PDN3 0.93 EX28DRAFT_0082 pyridoxine 5'-phosphate synthase 0.75 EX28DRAFT_0769 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF — —
Enterobacter sp. TBS_079 0.93 MPMX20_03435 Pyridoxine 5'-phosphate synthase 0.72 MPMX20_02696 Murein tetrapeptide carboxypeptidase low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS15720 pyridoxine 5'-phosphate synthase 0.15 DDA3937_RS14040 LD-carboxypeptidase low > 74
Pantoea sp. MT58 0.79 IAI47_04895 pyridoxine 5'-phosphate synthase 0.56 IAI47_11830 muramoyltetrapeptide carboxypeptidase low > 76
Rahnella sp. WP5 0.78 EX31_RS21850 pyridoxine 5'-phosphate synthase 0.16 EX31_RS09000 LD-carboxypeptidase low > 89
Erwinia tracheiphila SCR3 0.76 LU632_RS15370 pdxJ pyridoxine 5'-phosphate synthase 0.53 LU632_RS14010 ldcA muramoyltetrapeptide carboxypeptidase — —
Paraburkholderia sabiae LMG 24235 0.65 QEN71_RS04625 pyridoxine 5'-phosphate synthase 0.48 QEN71_RS07000 muramoyltetrapeptide carboxypeptidase — —
Paraburkholderia bryophila 376MFSha3.1 0.64 H281DRAFT_04365 pyridoxine 5'-phosphate synthase 0.47 H281DRAFT_05154 murein tetrapeptidase LD-carboxypeptidase (EC:3.4.17.13). Serine peptidase. MEROPS family S66 — —
Burkholderia phytofirmans PsJN 0.64 BPHYT_RS14355 pyridoxine 5'-phosphate synthase 0.47 BPHYT_RS11575 peptidase S66 — —
Paraburkholderia graminis OAS925 0.64 ABIE53_003033 pyridoxine 5-phosphate synthase 0.47 ABIE53_002396 muramoyltetrapeptide carboxypeptidase — —
Pseudomonas sp. RS175 0.63 PFR28_03520 'Pyridoxine 5'-phosphate synthase' transl_table=11 0.18 PFR28_03860 putative murein peptide carboxypeptidase — —
Pseudomonas putida KT2440 0.63 PP_1436 Pyridoxine 5'-phosphate synthase 0.17 PP_4799 putative Muramoyltetrapeptide carboxypeptidase — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_889 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.17 Pf1N1B4_2700 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_4837 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.17 PfGW456L13_1368 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_17510 pyridoxine 5'-phosphate synthase 0.18 AO356_15350 peptidase S66 — —
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_5429 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.19 Pf6N2E2_5006 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS14025 pyridoxine 5'-phosphate synthase 0.44 RR42_RS11375 peptidase S66 — —
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_04495 pyridoxine 5'-phosphate synthase 0.16 AO353_06435 peptidase S66 — —
Pseudomonas simiae WCS417 0.60 PS417_05205 pyridoxine 5'-phosphate synthase 0.16 PS417_24685 peptidase S66 — —
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.15 PFLU_RS26615 LD-carboxypeptidase — —
Pseudomonas fluorescens SBW25 0.60 PFLU_RS05275 pyridoxine 5'-phosphate synthase 0.15 PFLU_RS26615 LD-carboxypeptidase — —
Ralstonia solanacearum UW163 0.58 UW163_RS11965 pyridoxine 5'-phosphate synthase 0.42 UW163_RS13960 muramoyltetrapeptide carboxypeptidase — —
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS14500 pyridoxine 5'-phosphate synthase 0.42 RALBFv3_RS00630 muramoyltetrapeptide carboxypeptidase — —
Ralstonia solanacearum GMI1000 0.57 RS_RS05280 pyridoxine 5'-phosphate synthase 0.43 RS_RS07310 muramoyltetrapeptide carboxypeptidase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS18960 pyridoxine 5'-phosphate synthase 0.43 RPSI07_RS16875 muramoyltetrapeptide carboxypeptidase — —
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS09675 pyridoxine 5'-phosphate synthase 0.36 HSERO_RS11050 peptidase S66 — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS10220 pyridoxine 5'-phosphate synthase 0.44 ABZR87_RS12160 muramoyltetrapeptide carboxypeptidase — —
Synechococcus elongatus PCC 7942 0.52 Synpcc7942_1194 pdxJ pyridoxal phosphate biosynthetic protein PdxJ 0.17 Synpcc7942_1963 hypothetical protein — —
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2011 pyridoxine 5'-phosphate synthase 0.11 Ga0059261_1414 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS04215 pyridoxine 5'-phosphate synthase 0.35 ABCV34_RS02995 LD-carboxypeptidase — —
Bacteroides ovatus ATCC 8483 0.33 BACOVA_01142 pyridoxine 5'-phosphate synthase 0.14 BACOVA_01632 LD-carboxypeptidase low > 94
Bacteroides stercoris CC31F 0.33 HMPREF1181_RS06645 pyridoxine 5'-phosphate synthase 0.16 HMPREF1181_RS00850 LD-carboxypeptidase — —
Bacteroides thetaiotaomicron VPI-5482 0.32 BT3918 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) 0.15 BT2549 putative carboxypeptidase (NCBI ptt file) low > 81
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS01795 pyridoxine 5'-phosphate synthase 0.14 ABZR88_RS19815 LD-carboxypeptidase — —
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS25170 pyridoxine 5'-phosphate synthase 0.13 CA265_RS20275 LD-carboxypeptidase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.30 CA264_15275 pyridoxine 5'-phosphate synthase 0.13 CA264_14385 LD-carboxypeptidase — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS15180 pyridoxine 5'-phosphate synthase 0.40 ABZR86_RS10670 muramoyltetrapeptide carboxypeptidase — —
Rhodanobacter denitrificans MT42 0.29 LRK55_RS08205 pyridoxine 5'-phosphate synthase 0.41 LRK55_RS04360 muramoyltetrapeptide carboxypeptidase — —
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS08440 pyridoxine 5'-phosphate synthase 0.41 LRK54_RS04585 muramoyltetrapeptide carboxypeptidase — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_15220 pyridoxine 5'-phosphate synthase 0.41 OKGIIK_11415 ldcA muramoyltetrapeptide carboxypeptidase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF3349 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.28 GFF4699 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_1563 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.31 Ac3H11_555 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Variovorax sp. SCN45 0.22 GFF3873 Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) 0.29 GFF186 Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13) — —
Variovorax sp. OAS795 0.22 ABID97_RS08380 pyridoxine 5'-phosphate synthase 0.29 ABID97_RS16320 LD-carboxypeptidase — —

Not shown: 40 genomes with orthologs for BNILDI_11900 only; 0 genomes with orthologs for BNILDI_18870 only