| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli ECRC62 | 1.0 | BNILDI_11900 | pdxJ | pyridoxine 5'-phosphate synthase | 1.0 | BNILDI_08980 | dksA | RNA polymerase-binding protein DksA | 0.86 | 18 |
| Escherichia coli BL21 | 1.00 | ECD_02458 | | pyridoxine 5'-phosphate synthase | 1.00 | ECD_00144 | | transcriptional regulator of rRNA transcription; DnaK suppressor protein | — | — |
| Escherichia coli ECRC100 | 1.00 | OKFHMN_21425 | pdxJ | pyridoxine 5'-phosphate synthase | 1.00 | OKFHMN_10345 | dksA | RNA polymerase-binding protein DksA | low | > 80 |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_19195 | pdxJ | pyridoxine 5'-phosphate synthase | 1.00 | NIAGMN_08195 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli BW25113 | 1.00 | b2564 | pdxJ | pyridoxal phosphate biosynthetic protein (NCBI) | 1.00 | b0145 | dksA | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | 0.49 | 74 |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_13100 | pdxJ | pyridoxine 5'-phosphate synthase | 1.00 | NOLOHH_02690 | dksA | RNA polymerase-binding protein DksA | low | > 75 |
| Escherichia coli ECRC101 | 1.00 | MCAODC_11955 | pdxJ | pyridoxine 5'-phosphate synthase | 1.00 | MCAODC_00860 | dksA | RNA polymerase-binding protein DksA | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_01143 | | 'Pyridoxine 5'-phosphate synthase' transl_table=11 | 1.00 | OHPLBJKB_03517 | | RNA polymerase-binding transcription factor DksA | low | > 73 |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_25090 | pdxJ | pyridoxine 5'-phosphate synthase | 1.00 | JDDGAC_13940 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_06795 | pdxJ | pyridoxine 5'-phosphate synthase | 1.00 | KEDOAH_17810 | dksA | RNA polymerase-binding protein DksA | — | — |
| Escherichia coli ECOR38 | 0.99 | HEPCGN_20570 | pdxJ | pyridoxine 5'-phosphate synthase | 1.00 | HEPCGN_08295 | dksA | RNA polymerase-binding protein DksA | low | > 87 |
| Escherichia fergusonii Becca | 0.99 | EFB2_01332 | | Pyridoxine 5'-phosphate synthase | 1.00 | EFB2_03899 | | RNA polymerase-binding transcription factor DksA | low | > 86 |
| Escherichia coli Nissle 1917 | 0.98 | ECOLIN_RS14515 | | pyridoxine 5'-phosphate synthase | 1.00 | ECOLIN_RS00815 | | RNA polymerase-binding protein DksA | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.94 | GFF2472 | | 'Pyridoxine 5'-phosphate synthase (EC 2.6.99.2)' transl_table=11 | 0.99 | GFF87 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Klebsiella michiganensis M5al | 0.94 | BWI76_RS21305 | | pyridoxine 5'-phosphate synthase | 0.98 | BWI76_RS05015 | | transcriptional regulator | — | — |
| Enterobacter asburiae PDN3 | 0.93 | EX28DRAFT_0082 | | pyridoxine 5'-phosphate synthase | 0.99 | EX28DRAFT_3734 | | transcriptional regulator, TraR/DksA family | — | — |
| Enterobacter sp. TBS_079 | 0.93 | MPMX20_03435 | | Pyridoxine 5'-phosphate synthase | 0.99 | MPMX20_00831 | | RNA polymerase-binding transcription factor DksA | low | > 85 |
| Dickeya dianthicola ME23 | 0.81 | DZA65_RS16885 | | pyridoxine 5'-phosphate synthase | 0.97 | DZA65_RS17135 | | RNA polymerase-binding protein DksA | — | — |
| Dickeya dianthicola 67-19 | 0.81 | HGI48_RS15805 | | pyridoxine 5'-phosphate synthase | 0.97 | HGI48_RS16050 | | RNA polymerase-binding protein DksA | low | > 71 |
| Dickeya dadantii 3937 | 0.81 | DDA3937_RS15720 | | pyridoxine 5'-phosphate synthase | 0.98 | DDA3937_RS15935 | | RNA polymerase-binding protein DksA | — | — |
| Pectobacterium carotovorum WPP14 | 0.80 | HER17_RS05830 | | pyridoxine 5'-phosphate synthase | 0.95 | HER17_RS05580 | | RNA polymerase-binding protein DksA | 0.82 | 57 |
| Pantoea sp. MT58 | 0.79 | IAI47_04895 | | pyridoxine 5'-phosphate synthase | 0.97 | IAI47_15635 | | RNA polymerase-binding protein DksA | low | > 76 |
| Rahnella sp. WP5 | 0.78 | EX31_RS21850 | | pyridoxine 5'-phosphate synthase | 0.97 | EX31_RS03250 | | RNA polymerase-binding protein DksA | low | > 89 |
| Serratia liquefaciens MT49 | 0.78 | IAI46_19535 | | pyridoxine 5'-phosphate synthase | 0.96 | IAI46_21210 | | RNA polymerase-binding protein DksA | — | — |
| Erwinia tracheiphila SCR3 | 0.76 | LU632_RS15370 | pdxJ | pyridoxine 5'-phosphate synthase | 0.96 | LU632_RS20080 | dksA | RNA polymerase-binding protein DksA | — | — |
| Kangiella aquimarina DSM 16071 | 0.74 | B158DRAFT_2190 | | pyridoxine 5'-phosphate synthase | 0.73 | B158DRAFT_0056 | | transcriptional regulator, TraR/DksA family | — | — |
| Alteromonas macleodii MIT1002 | 0.73 | MIT1002_00791 | | Pyridoxine 5'-phosphate synthase | 0.73 | MIT1002_03690 | | DnaK suppressor protein | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.71 | CSW01_12440 | | pyridoxine 5'-phosphate synthase | 0.84 | CSW01_03155 | | RNA polymerase-binding transcription factor DksA | — | — |
| Shewanella loihica PV-4 | 0.67 | Shew_1057 | | pyridoxal phosphate biosynthetic protein PdxJ (RefSeq) | 0.84 | Shew_3129 | | TraR/DksA family transcriptional regulator (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.67 | Shewana3_3023 | | pyridoxine 5'-phosphate synthase (RefSeq) | 0.83 | Shewana3_3404 | | TraR/DksA family transcriptional regulator (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.67 | SO1351 | pdxJ | pyridoxal phosphate biosynthetic protein PdxJ (NCBI ptt file) | 0.83 | SO0874 | dksA | DnaK suppressor protein (NCBI ptt file) | — | — |
| Shewanella amazonensis SB2B | 0.66 | Sama_0883 | | pyridoxine 5'-phosphate synthase (RefSeq) | 0.84 | Sama_0780 | | TraR/DksA family transcriptional regulator (RefSeq) | — | — |
| Pseudomonas sp. RS175 | 0.63 | PFR28_03520 | | 'Pyridoxine 5'-phosphate synthase' transl_table=11 | 0.68 | PFR28_03714 | | RNA polymerase-binding transcription factor DksA | — | — |
| Pseudomonas putida KT2440 | 0.63 | PP_1436 | | Pyridoxine 5'-phosphate synthase | 0.63 | PP_4693 | | RNA polymerase-binding transcription factor DksA | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.63 | Pf1N1B4_889 | | Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) | 0.68 | Pf1N1B4_2862 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.62 | PfGW456L13_4837 | | Pyridoxine 5'-phosphate synthase (EC 2.6.99.2) | 0.67 | PfGW456L13_1528 | | C4-type zinc finger protein, DksA/TraR family | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.62 | AO356_17510 | | pyridoxine 5'-phosphate synthase | 0.67 | AO356_16095 | | molecular chaperone DnaK | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_3948 | | pyridoxine 5'-phosphate synthase | 0.66 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | — | — |
| Pseudomonas sp. S08-1 | 0.62 | OH686_20095 | | pyridoxine 5'-phosphate synthase | 0.67 | OH686_17280 | | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_3948 | | pyridoxine 5'-phosphate synthase | 0.66 | Psyr_0835 | | transcriptional regulator, TraR/DksA family | — | — |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_3089 | | pyridoxine 5'-phosphate synthase | 0.66 | Psest_1003 | | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.61 | AO353_04495 | | pyridoxine 5'-phosphate synthase | 0.67 | AO353_14420 | | molecular chaperone DnaK | — | — |
| Pseudomonas simiae WCS417 | 0.60 | PS417_05205 | | pyridoxine 5'-phosphate synthase | 0.67 | PS417_23875 | | molecular chaperone DnaK | — | — |
| Marinobacter adhaerens HP15 | 0.60 | HP15_787 | | pyridoxal phosphate biosynthetic protein PdxJ | 0.60 | HP15_332 | | transcriptional regulator, TraR/DksA family | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS05275 | | pyridoxine 5'-phosphate synthase | 0.66 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | — | — |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS05275 | | pyridoxine 5'-phosphate synthase | 0.66 | PFLU_RS25715 | | RNA polymerase-binding protein DksA | — | — |
| Acinetobacter radioresistens SK82 | 0.59 | MPMX26_02152 | | Pyridoxine 5'-phosphate synthase | 0.64 | MPMX26_00177 | | RNA polymerase-binding transcription factor DksA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.58 | RALBFv3_RS14500 | | pyridoxine 5'-phosphate synthase | 0.35 | RALBFv3_RS09645 | | RNA polymerase-binding protein DksA | — | — |
| Ralstonia solanacearum UW163 | 0.58 | UW163_RS11965 | | pyridoxine 5'-phosphate synthase | 0.35 | UW163_RS03935 | | RNA polymerase-binding protein DksA | — | — |
| Phaeobacter inhibens DSM 17395 | 0.55 | PGA1_c01030 | | pyridoxine 5'-phosphate synthase PdxJ | 0.33 | PGA1_c11040 | | dnaK suppressor protein DksA | — | — |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS10220 | | pyridoxine 5'-phosphate synthase | 0.36 | ABZR87_RS05100 | | RNA polymerase-binding protein DksA | — | — |
| Dechlorosoma suillum PS | 0.53 | Dsui_2463 | | pyridoxine 5''-phosphate synthase | 0.57 | Dsui_2717 | | RNA polymerase-binding protein DksA | — | — |
| Bosea sp. OAE506 | 0.52 | ABIE41_RS19905 | | pyridoxine 5'-phosphate synthase | 0.33 | ABIE41_RS13460 | | RNA polymerase-binding protein DksA | low | > 77 |
| Magnetospirillum magneticum AMB-1 | 0.52 | AMB_RS11405 | | pyridoxine 5'-phosphate synthase | 0.33 | AMB_RS19350 | | RNA polymerase-binding protein DksA | — | — |
| Caulobacter crescentus NA1000 | 0.52 | CCNA_01626 | | pyridoxal phosphate biosynthetic protein pdxJ | 0.37 | CCNA_02663 | | DnaK suppressor protein DksA | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.52 | CCNA_01626 | | pyridoxal phosphate biosynthetic protein pdxJ | 0.37 | CCNA_02663 | | DnaK suppressor protein DksA | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.50 | Ga0059261_2011 | | pyridoxine 5'-phosphate synthase | 0.33 | Ga0059261_0274 | | transcriptional regulator, TraR/DksA family | — | — |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS04215 | | pyridoxine 5'-phosphate synthase | 0.34 | ABCV34_RS13420 | | RNA polymerase-binding protein DksA | — | — |
| Rhodospirillum rubrum S1H | 0.50 | Rru_A1854 | | Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) | 0.30 | Rru_A2847 | | Transcriptional regulators, TraR/DksA family (NCBI) | low | > 58 |
| Rhodopseudomonas palustris CGA009 | 0.48 | TX73_013960 | | pyridoxine 5'-phosphate synthase | 0.33 | TX73_020255 | | RNA polymerase-binding protein DksA | 0.35 | 69 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.42 | A4249_RS05520 | | pyridoxine 5'-phosphate synthase | 0.38 | A4249_RS08530 | | RNA polymerase-binding protein DksA | — | — |
| Sinorhizobium meliloti 1021 | 0.28 | SMc01407 | | pyridoxine 5'-phosphate synthase | 0.36 | SMc00469 | | DnaK suppressor protein | — | — |
| Rhizobium sp. OAE497 | 0.25 | ABIE40_RS11420 | | pyridoxine 5'-phosphate synthase | 0.37 | ABIE40_RS10345 | | RNA polymerase-binding protein DksA | — | — |
Not shown: 36 genomes with orthologs for BNILDI_11900 only; 0 genomes with orthologs for BNILDI_08980 only