Conservation of cofitness between BBR_RS11025 and BBR_RS12995 in Bifidobacterium breve UCC2003

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bifidobacterium breve UCC2003 1.0 BBR_RS11025 aspartate-semialdehyde dehydrogenase 1.0 BBR_RS12995 4-hydroxy-tetrahydrodipicolinate synthase 0.90 12
Methanococcus maripaludis JJ 0.34 MMJJ_RS07195 aspartate-semialdehyde dehydrogenase 0.24 MMJJ_RS02035 4-hydroxy-tetrahydrodipicolinate synthase — —
Methanococcus maripaludis S2 0.34 MMP_RS07160 aspartate-semialdehyde dehydrogenase 0.24 MMP_RS03035 4-hydroxy-tetrahydrodipicolinate synthase — —
Magnetospirillum magneticum AMB-1 0.13 AMB_RS03035 aspartate-semialdehyde dehydrogenase 0.29 AMB_RS12805 4-hydroxy-tetrahydrodipicolinate synthase — —
Dinoroseobacter shibae DFL-12 0.12 Dshi_3240 aspartate-semialdehyde dehydrogenase (RefSeq) 0.30 Dshi_0149 dihydrodipicolinate synthase (RefSeq) — —
Synechococcus elongatus PCC 7942 0.12 Synpcc7942_1848 asd aspartate-semialdehyde dehydrogenase 0.34 Synpcc7942_1847 dapA dihydrodipicolinate synthase — —
Sphingomonas koreensis DSMZ 15582 0.12 Ga0059261_4003 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 0.24 Ga0059261_0213 4-hydroxy-tetrahydrodipicolinate synthase — —
Parabacteroides merdae CL09T00C40 0.12 HMPREF1078_RS05255 aspartate-semialdehyde dehydrogenase 0.28 HMPREF1078_RS01735 4-hydroxy-tetrahydrodipicolinate synthase — —
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU3048 asd aspartate-semialdehyde dehydrogenase (TIGR) 0.29 DVU1868 dapA dihydrodipicolinate synthase (TIGR) — —
Caulobacter crescentus NA1000 0.11 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.28 CCNA_01253 dihydrodipicolinate synthase — —
Caulobacter crescentus NA1000 Δfur 0.11 CCNA_00253 aspartate-semialdehyde dehydrogenase 0.28 CCNA_01253 dihydrodipicolinate synthase — —
Phaeobacter inhibens DSM 17395 0.11 PGA1_c31480 aspartate-semialdehyde dehydrogenase Asd 0.27 PGA1_c28930 dihydrodipicolinate synthase DapA — —
Mycobacterium tuberculosis H37Rv 0.11 Rv3708c Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase) 0.39 Rv2753c Probable dihydrodipicolinate synthase DapA (DHDPS) (dihydrodipicolinate synthetase) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.11 ABZR88_RS18675 aspartate-semialdehyde dehydrogenase 0.24 ABZR88_RS15585 4-hydroxy-tetrahydrodipicolinate synthase — —
Rhodopseudomonas palustris CGA009 0.11 TX73_001190 aspartate-semialdehyde dehydrogenase 0.23 TX73_015535 4-hydroxy-tetrahydrodipicolinate synthase — —
Rhodospirillum rubrum S1H 0.11 Rru_A1196 Aspartate-semialdehyde dehydrogenase, USG-1 related (NCBI) 0.29 Rru_A1865 Dihydrodipicolinate synthase subfamily (NCBI) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.11 CA264_18890 aspartate-semialdehyde dehydrogenase 0.22 CA264_04485 4-hydroxy-tetrahydrodipicolinate synthase — —
Sinorhizobium meliloti 1021 0.11 SMc04410 aspartate-semialdehyde dehydrogenase 0.27 SMc02404 dihydrodipicolinate synthase — —
Shewanella oneidensis MR-1 0.11 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) 0.25 SO1879 dapA dihydrodipicolinate synthase (NCBI ptt file) — —
Vibrio cholerae E7946 ATCC 55056 0.11 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.24 CSW01_10755 4-hydroxy-tetrahydrodipicolinate synthase — —
Pseudomonas fluorescens FW300-N2E2 0.11 Pf6N2E2_4232 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.26 Pf6N2E2_2747 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) — —
Shewanella sp. ANA-3 0.10 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) 0.24 Shewana3_1656 dihydrodipicolinate synthase (RefSeq) — —
Phocaeicola dorei CL03T12C01 0.10 ABI39_RS01110 aspartate-semialdehyde dehydrogenase 0.28 ABI39_RS17235 4-hydroxy-tetrahydrodipicolinate synthase — —
Phocaeicola vulgatus CL09T03C04 0.10 HMPREF1058_RS00210 aspartate-semialdehyde dehydrogenase 0.28 HMPREF1058_RS03990 4-hydroxy-tetrahydrodipicolinate synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.10 CA265_RS15395 aspartate-semialdehyde dehydrogenase 0.23 CA265_RS02050 4-hydroxy-tetrahydrodipicolinate synthase — —
Rhodanobacter sp. FW510-T8 0.10 OKGIIK_04815 asd aspartate-semialdehyde dehydrogenase 0.19 OKGIIK_03855 dapA 4-hydroxy-tetrahydrodipicolinate synthase — —
Pseudomonas sp. RS175 0.10 PFR28_04564 Aspartate-semialdehyde dehydrogenase 0.27 PFR28_00699 4-hydroxy-tetrahydrodipicolinate synthase — —
Shewanella loihica PV-4 0.10 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) 0.24 Shew_1848 dihydrodipicolinate synthase (RefSeq) — —
Bacteroides ovatus ATCC 8483 0.10 BACOVA_03470 aspartate-semialdehyde dehydrogenase 0.28 BACOVA_02617 dihydrodipicolinate synthase — —
Azospirillum brasilense Sp245 0.10 AZOBR_RS14735 aspartate-semialdehyde dehydrogenase 0.27 AZOBR_RS08420 dihydrodipicolinate synthase — —
Rhodanobacter denitrificans MT42 0.10 LRK55_RS01495 aspartate-semialdehyde dehydrogenase 0.23 LRK55_RS14800 4-hydroxy-tetrahydrodipicolinate synthase — —
Dyella japonica UNC79MFTsu3.2 0.10 ABZR86_RS08030 aspartate-semialdehyde dehydrogenase 0.25 ABZR86_RS00785 4-hydroxy-tetrahydrodipicolinate synthase — —
Bacteroides thetaiotaomicron VPI-5482 0.10 BT3636 aspartate-semialdehyde dehydrogenase (NCBI ptt file) 0.28 BT0895 dihydrodipicolinate synthase (NCBI ptt file) — —
Desulfovibrio vulgaris Miyazaki F 0.10 DvMF_2382 aspartate-semialdehyde dehydrogenase (RefSeq) 0.28 DvMF_0562 dihydrodipicolinate synthase (RefSeq) — —
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS01715 aspartate-semialdehyde dehydrogenase 0.24 LRK54_RS15085 4-hydroxy-tetrahydrodipicolinate synthase — —
Bacteroides stercoris CC31F 0.10 HMPREF1181_RS03115 aspartate-semialdehyde dehydrogenase 0.28 HMPREF1181_RS14165 4-hydroxy-tetrahydrodipicolinate synthase — —
Serratia liquefaciens MT49 0.08 IAI46_17845 aspartate-semialdehyde dehydrogenase 0.28 IAI46_18780 4-hydroxy-tetrahydrodipicolinate synthase low > 86
Dickeya dadantii 3937 0.08 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase 0.29 DDA3937_RS06065 4-hydroxy-tetrahydrodipicolinate synthase — —
Dickeya dianthicola 67-19 0.08 HGI48_RS14440 aspartate-semialdehyde dehydrogenase 0.29 HGI48_RS06110 4-hydroxy-tetrahydrodipicolinate synthase — —

Not shown: 9 genomes with orthologs for BBR_RS11025 only; 48 genomes with orthologs for BBR_RS12995 only