Conservation of cofitness between B158DRAFT_2275 and B158DRAFT_0135 in Kangiella aquimarina DSM 16071

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA 1.0 B158DRAFT_0135 Cytochrome oxidase assembly factor 0.41 18
Marinobacter adhaerens HP15 0.54 HP15_790 23S rRNA 5-methyluridine methyltransferase 0.43 HP15_3773 cytochrome c oxidase assembly protein CtaG/Cox11 low > 73
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.3669.1 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.32 Xcc-8004.4843.1 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 74
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_00846 23S rRNA m(5)U-1939 methyltransferase 0.35 H281DRAFT_01992 cytochrome c oxidase assembly protein subunit 11 low > 103
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS13170 23S rRNA methyltransferase 0.36 RR42_RS01885 cytochrome C oxidase assembly protein low > 128
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS09125 23S rRNA methyltransferase 0.36 BPHYT_RS02655 cytochrome C oxidase assembly protein 0.31 66
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS14825 23S rRNA methyltransferase 0.36 HSERO_RS20780 cytochrome C oxidase assembly protein low > 78
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS10885 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.37 ABZR87_RS06810 cytochrome c oxidase assembly protein low > 80
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS22225 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.31 QEN71_RS01510 cytochrome c oxidase assembly protein low > 153
Ralstonia solanacearum GMI1000 0.38 RS_RS06055 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 RS_RS01795 cytochrome c oxidase assembly protein low > 80
Ralstonia solanacearum UW163 0.38 UW163_RS12710 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 UW163_RS02625 cytochrome c oxidase assembly protein — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS15245 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 RALBFv3_RS10955 cytochrome c oxidase assembly protein low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS18130 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 RPSI07_RS22350 cytochrome c oxidase assembly protein low > 81
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.38 PFLU_RS00300 cytochrome c oxidase assembly protein low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.38 PFLU_RS00300 cytochrome c oxidase assembly protein low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF3883 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.32 GFF691 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 90
Acidovorax sp. GW101-3H11 0.37 Ac3H11_2847 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.34 Ac3H11_3890 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 79
Pseudomonas simiae WCS417 0.36 PS417_20155 23S rRNA methyltransferase 0.39 PS417_00310 cysteine synthase low > 88
Pseudomonas stutzeri RCH2 0.36 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.40 Psest_4328 Cytochrome oxidase assembly factor low > 67
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.38 Pf1N1B4_1856 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 87
Pseudomonas sp. S08-1 0.34 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.37 OH686_12315 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 80
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_19055 23S rRNA methyltransferase 0.39 AO356_11170 cysteine synthase low > 104
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.39 Pf6N2E2_4100 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 103
Shewanella sp. ANA-3 0.34 Shewana3_1110 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.45 Shewana3_3993 cytochrome C oxidase assembly protein (RefSeq) low > 73
Variovorax sp. SCN45 0.34 GFF2841 23S rRNA (uracil(1939)-C(5))-methyltransferase (EC 2.1.1.190) 0.33 GFF2300 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 127
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_02715 23S rRNA methyltransferase 0.37 AO353_10840 cysteine synthase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.31 Psyr_0285 Cytochrome c oxidase assembly protein CtaG/Cox11 0.27 54
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.31 Psyr_0285 Cytochrome c oxidase assembly protein CtaG/Cox11 low > 86
Shewanella oneidensis MR-1 0.33 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) 0.45 SO4608 coxG cytochrome c oxidase assembly protein coxG (NCBI ptt file) low > 76
Pseudomonas sp. RS175 0.33 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.38 PFR28_04689 Cytochrome c oxidase assembly protein CtaG low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.40 PfGW456L13_612 Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1 low > 87
Pseudomonas putida KT2440 0.33 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.41 PP_0105 Cytochrome C oxidase assembly protein low > 96
Shewanella amazonensis SB2B 0.31 Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.43 Sama_3485 cytochrome C oxidase assembly protein (RefSeq) low > 62
Shewanella loihica PV-4 0.31 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.45 Shew_0123 cytochrome C oxidase assembly protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.25 MIT1002_00793 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.48 MIT1002_04033 Cytochrome c oxidase assembly protein CtaG low > 70
Azospirillum sp. SherDot2 0.15 MPMX19_02196 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.26 MPMX19_00888 Cytochrome c oxidase assembly protein CtaG low > 112
Magnetospirillum magneticum AMB-1 0.15 AMB_RS01660 class I SAM-dependent RNA methyltransferase 0.25 AMB_RS10955 cytochrome c oxidase assembly protein low > 64
Dinoroseobacter shibae DFL-12 0.15 Dshi_3492 (Uracil-5)-methyltransferase (RefSeq) 0.25 Dshi_1143 cytochrome c oxidase assembly protein CtaG/Cox11 (RefSeq) — —
Azospirillum brasilense Sp245 0.14 AZOBR_RS01195 RNA methyltransferase 0.29 AZOBR_RS10575 cytochrome C oxidase assembly protein low > 97
Sinorhizobium meliloti 1021 0.13 SMc00974 RNA methyltransferase 0.29 SMc00012 cytochrome C oxidase assembly protein low > 103
Phaeobacter inhibens DSM 17395 0.13 PGA1_c34810 putative RNA methyltransferase 0.26 PGA1_c06280 cytochrome c oxidase assembly protein CtaG low > 62
Bosea sp. OAE506 0.13 ABIE41_RS22255 RNA methyltransferase 0.23 ABIE41_RS22965 cytochrome c oxidase assembly protein low > 77
Agrobacterium fabrum C58 0.12 Atu0735 RNA methyltransferase 0.31 Atu0770 cytochrome C oxidase assembly protein low > 89
Sphingomonas koreensis DSMZ 15582 0.12 Ga0059261_0648 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 0.21 Ga0059261_2003 Cytochrome oxidase assembly factor low > 68
Caulobacter crescentus NA1000 0.09 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.24 CCNA_03514 cytochrome c oxidase assembly protein ctaG low > 66
Caulobacter crescentus NA1000 Δfur 0.09 CCNA_01387 tRNA (uracil-5-)-methyltransferase related protein 0.24 CCNA_03514 cytochrome c oxidase assembly protein ctaG low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.09 A4249_RS08425 class I SAM-dependent RNA methyltransferase 0.20 A4249_RS00120 cytochrome c oxidase assembly protein low > 48

Not shown: 49 genomes with orthologs for B158DRAFT_2275 only; 2 genomes with orthologs for B158DRAFT_0135 only