Conservation of cofitness between AO356_14785 and AO356_17505 in Pseudomonas fluorescens FW300-N2C3

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2C3 1.0 AO356_14785 ABC-ATPase UvrA 1.0 AO356_17505 DNA repair protein RecO 0.68 8
Pseudomonas fluorescens FW300-N2E2 1.00 Pf6N2E2_4888 Excinuclease ABC subunit A 0.97 Pf6N2E2_5428 DNA recombination and repair protein RecO 0.65 7
Pseudomonas sp. RS175 0.99 PFR28_03974 UvrABC system protein A 0.96 PFR28_03521 DNA repair protein RecO low > 88
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2611 Excinuclease ABC subunit A 0.95 Pf1N1B4_890 DNA recombination and repair protein RecO 0.52 6
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1283 Excinuclease ABC subunit A 0.91 PfGW456L13_4838 DNA recombination and repair protein RecO 0.33 30
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_06855 ABC-ATPase UvrA 0.94 AO353_04500 DNA repair protein RecO 0.30 76
Pseudomonas simiae WCS417 0.97 PS417_25395 excinuclease ABC subunit A 0.91 PS417_05200 DNA recombination protein RecO 0.27 27
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS27025 excinuclease ABC subunit UvrA 0.90 PFLU_RS05270 DNA repair protein RecO low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS27025 excinuclease ABC subunit UvrA 0.90 PFLU_RS05270 DNA repair protein RecO low > 109
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_4520 Excinuclease ABC subunit A 0.87 Psyr_3949 DNA replication and repair protein RecO 0.75 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_4520 Excinuclease ABC subunit A 0.87 Psyr_3949 DNA replication and repair protein RecO 0.85 3
Pseudomonas putida KT2440 0.93 PP_0483 excinuclease (uvrABC system protein A) 0.80 PP_1435 DNA repair protein RecO — —
Pseudomonas sp. S08-1 0.92 OH686_15495 excinuclease ABC subunit A 0.73 OH686_20090 DNA repair protein RecO low > 80
Pseudomonas stutzeri RCH2 0.90 Psest_3576 excinuclease ABC, A subunit 0.71 Psest_3090 DNA repair protein RecO 0.85 4
Escherichia coli Nissle 1917 0.77 ECOLIN_RS23485 excinuclease ABC subunit UvrA 0.32 ECOLIN_RS14520 DNA repair protein RecO — —
Escherichia coli ECRC102 0.77 NIAGMN_10740 uvrA excinuclease ABC subunit UvrA 0.32 NIAGMN_19190 recO DNA repair protein RecO — —
Escherichia coli ECRC101 0.77 MCAODC_03405 uvrA excinuclease ABC subunit UvrA 0.32 MCAODC_11950 recO DNA repair protein RecO low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1429 Excinuclease ABC subunit A 0.30 GFF2473 DNA recombination and repair protein RecO low > 78
Escherichia coli ECOR38 0.77 HEPCGN_11510 uvrA excinuclease ABC subunit UvrA 0.32 HEPCGN_20565 recO DNA repair protein RecO low > 87
Escherichia fergusonii Becca 0.77 EFB2_04533 UvrABC system protein A 0.32 EFB2_01331 DNA repair protein RecO low > 86
Escherichia coli ECRC98 0.77 JDDGAC_16530 uvrA excinuclease ABC subunit UvrA 0.32 JDDGAC_25085 recO DNA repair protein RecO low > 86
Rahnella sp. WP5 0.77 EX31_RS11990 excinuclease ABC subunit UvrA 0.31 EX31_RS21845 DNA repair protein RecO low > 89
Escherichia coli ECRC99 0.77 KEDOAH_15255 uvrA excinuclease ABC subunit UvrA 0.32 KEDOAH_06800 recO DNA repair protein RecO — —
Escherichia coli ECOR27 0.77 NOLOHH_05145 uvrA excinuclease ABC subunit UvrA 0.32 NOLOHH_13095 recO DNA repair protein RecO low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_03983 UvrABC system protein A 0.32 OHPLBJKB_01142 DNA repair protein RecO low > 73
Escherichia coli ECRC62 0.77 BNILDI_06380 uvrA excinuclease ABC subunit UvrA 0.32 BNILDI_11895 recO DNA repair protein RecO low > 75
Escherichia coli BW25113 0.77 b4058 uvrA excinuclease ABC subunit A (NCBI) 0.32 b2565 recO DNA repair protein RecO (NCBI) 0.75 5
Escherichia coli ECRC100 0.77 OKFHMN_12895 uvrA excinuclease ABC subunit UvrA 0.32 OKFHMN_21420 recO DNA repair protein RecO low > 80
Escherichia coli BL21 0.77 ECD_03930 ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC 0.32 ECD_02459 gap repair protein 0.56 28
Klebsiella michiganensis M5al 0.77 BWI76_RS01950 excinuclease ABC subunit A 0.31 BWI76_RS21310 DNA repair protein RecO low > 92
Dickeya dianthicola ME23 0.77 DZA65_RS18735 excinuclease ABC subunit UvrA 0.32 DZA65_RS16890 DNA repair protein RecO low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS17605 excinuclease ABC subunit UvrA 0.32 DDA3937_RS15725 DNA repair protein RecO low > 74
Dickeya dianthicola 67-19 0.77 HGI48_RS17610 excinuclease ABC subunit UvrA 0.33 HGI48_RS15810 DNA repair protein RecO low > 71
Marinobacter adhaerens HP15 0.77 HP15_406 excinuclease ABC, ATPase subunit (A) 0.29 HP15_786 DNA repair protein RecO 0.61 21
Enterobacter sp. TBS_079 0.77 MPMX20_00276 UvrABC system protein A 0.26 MPMX20_03436 DNA repair protein RecO 0.37 37
Pectobacterium carotovorum WPP14 0.76 HER17_RS03550 excinuclease ABC subunit UvrA 0.31 HER17_RS05825 DNA repair protein RecO low > 75
Kangiella aquimarina DSM 16071 0.76 B158DRAFT_0885 excinuclease ABC, A subunit 0.24 B158DRAFT_2189 DNA replication and repair protein RecO 0.78 4
Alteromonas macleodii MIT1002 0.76 MIT1002_00179 Excinuclease ABC subunit A 0.29 MIT1002_00790 Recombination protein O low > 70
Enterobacter asburiae PDN3 0.76 EX28DRAFT_4246 excinuclease ABC, A subunit 0.31 EX28DRAFT_0081 DNA replication and repair protein RecO low > 76
Serratia liquefaciens MT49 0.76 IAI46_22905 excinuclease ABC subunit UvrA 0.29 IAI46_19540 DNA repair protein RecO 0.43 35
Vibrio cholerae E7946 ATCC 55056 0.76 CSW01_02080 UvrABC system protein A 0.30 CSW01_12445 DNA repair protein RecO low > 62
Pantoea sp. MT58 0.76 IAI47_17815 excinuclease ABC subunit UvrA 0.33 IAI47_04890 DNA repair protein RecO low > 76
Shewanella amazonensis SB2B 0.75 Sama_0514 excinuclease ABC, A subunit (RefSeq) 0.27 Sama_0882 DNA repair protein RecO (RefSeq) 0.61 10
Shewanella oneidensis MR-1 0.75 SO4030 uvrA excinuclease ABC, A subunit (NCBI ptt file) 0.28 SO1350 recO DNA repair protein RecO (NCBI ptt file) 0.49 8
Shewanella sp. ANA-3 0.75 Shewana3_3592 excinuclease ABC subunit A (RefSeq) 0.28 Shewana3_3024 DNA repair protein RecO (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.75 LU632_RS23685 uvrA excinuclease ABC subunit UvrA 0.31 LU632_RS15375 recO DNA repair protein RecO low > 74
Shewanella loihica PV-4 0.74 Shew_0533 excinuclease ABC, A subunit (RefSeq) 0.29 Shew_1056 DNA repair protein RecO (RefSeq) 0.84 8
Dechlorosoma suillum PS 0.73 Dsui_1622 excinuclease ABC, A subunit 0.28 Dsui_2462 DNA repair protein RecO 0.95 2
Xanthomonas campestris pv. campestris strain 8004 0.72 Xcc-8004.3830.1 Excinuclease ABC subunit A 0.26 Xcc-8004.3671.1 DNA recombination and repair protein RecO low > 74
Dyella japonica UNC79MFTsu3.2 0.72 ABZR86_RS00910 excinuclease ABC subunit UvrA 0.31 ABZR86_RS07140 DNA repair protein RecO 0.89 6
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_03980 uvrA excinuclease ABC subunit UvrA 0.31 OKGIIK_07860 recO DNA repair protein RecO low > 52
Rhodanobacter denitrificans FW104-10B01 0.71 LRK54_RS15210 excinuclease ABC subunit UvrA 0.31 LRK54_RS16980 DNA repair protein RecO low > 59
Rhodanobacter denitrificans MT42 0.71 LRK55_RS14925 excinuclease ABC subunit UvrA 0.31 LRK55_RS16695 DNA repair protein RecO low > 63
Ralstonia sp. UNC404CL21Col 0.70 ABZR87_RS07120 excinuclease ABC subunit UvrA 0.31 ABZR87_RS10215 DNA repair protein RecO low > 80
Ralstonia solanacearum PSI07 0.70 RPSI07_RS22065 excinuclease ABC subunit UvrA 0.32 RPSI07_RS18965 DNA repair protein RecO low > 81
Ralstonia solanacearum GMI1000 0.70 RS_RS02080 excinuclease ABC subunit UvrA 0.32 RS_RS05275 DNA repair protein RecO low > 80
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS11235 excinuclease ABC subunit UvrA 0.32 RALBFv3_RS14495 DNA repair protein RecO low > 76
Ralstonia solanacearum UW163 0.70 UW163_RS02345 excinuclease ABC subunit UvrA 0.32 UW163_RS11960 DNA repair protein RecO — —
Acinetobacter radioresistens SK82 0.69 MPMX26_02892 UvrABC system protein A 0.28 MPMX26_02153 DNA repair protein RecO low > 36
Variovorax sp. SCN45 0.66 GFF4944 Excinuclease ABC subunit A 0.12 GFF3872 DNA recombination and repair protein RecO low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF2755 Excinuclease ABC subunit A 0.16 GFF3348 DNA recombination and repair protein RecO low > 90
Acidovorax sp. GW101-3H11 0.65 Ac3H11_4387 Excinuclease ABC subunit A 0.12 Ac3H11_1564 DNA recombination and repair protein RecO 0.41 21

Not shown: 41 genomes with orthologs for AO356_14785 only; 1 genomes with orthologs for AO356_17505 only