Conservation of cofitness between ABZR87_RS05070 and ABZR87_RS15330 in Ralstonia sp. UNC404CL21Col

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS05070 class I SAM-dependent rRNA methyltransferase 1.0 ABZR87_RS15330 biotin-dependent carboxyltransferase family protein 0.47 5
Ralstonia solanacearum PSI07 0.95 RPSI07_RS23695 class I SAM-dependent rRNA methyltransferase 0.87 RPSI07_RS13785 allophanate hydrolase low > 81
Ralstonia solanacearum UW163 0.95 UW163_RS03910 class I SAM-dependent rRNA methyltransferase 0.85 UW163_RS10240 allophanate hydrolase — —
Ralstonia solanacearum IBSBF1503 0.95 RALBFv3_RS09670 class I SAM-dependent rRNA methyltransferase 0.85 RALBFv3_RS03430 allophanate hydrolase low > 76
Ralstonia solanacearum GMI1000 0.94 RS_RS00255 class I SAM-dependent rRNA methyltransferase 0.85 RS_RS10890 allophanate hydrolase low > 80
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS00350 class I SAM-dependent rRNA methyltransferase 0.48 QEN71_RS28655 biotin-dependent carboxyltransferase family protein low > 153
Cupriavidus basilensis FW507-4G11 0.77 RR42_RS01670 23S rRNA methyltransferase 0.56 RR42_RS00645 allophanate hydrolase low > 128
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS01650 23S rRNA methyltransferase 0.46 BPHYT_RS18630 allophanate hydrolase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_02203 SAM-dependent methyltransferase /23S rRNA m(5)C-1962 methyltransferase 0.47 H281DRAFT_05812 biotin-dependent carboxylase uncharacterized domain-containing protein low > 103
Paraburkholderia graminis OAS925 0.74 ABIE53_000425 23S rRNA (cytosine1962-C5)-methyltransferase 0.47 ABIE53_000048 biotin-dependent carboxylase-like uncharacterized protein low > 113
Shewanella amazonensis SB2B 0.49 Sama_2965 putative SAM-dependent methyltransferase (RefSeq) 0.35 Sama_0022 Urea carboxylase (RefSeq) low > 62
Klebsiella michiganensis M5al 0.49 BWI76_RS10045 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.43 BWI76_RS08355 hypothetical protein low > 92
Escherichia coli BL21 0.48 ECD_00971 23S rRNA m(5)C1962 methyltransferase, SAM-dependent 0.42 ECD_00672 putative allophanate hydrolase, subunit 2 low > 61
Escherichia coli BW25113 0.48 b0967 yccW predicted methyltransferase (RefSeq) 0.42 b0712 ybgK predicted enzyme subunit (NCBI) low > 76
Erwinia tracheiphila SCR3 0.48 LU632_RS10090 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.36 LU632_RS16140 biotin-dependent carboxyltransferase family protein low > 74
Escherichia coli Nissle 1917 0.48 ECOLIN_RS05085 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 ECOLIN_RS03810 5-oxoprolinase subunit PxpC — —
Escherichia coli ECRC102 0.48 NIAGMN_02905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 NIAGMN_05055 pxpC 5-oxoprolinase subunit PxpC — —
Escherichia coli ECOR38 0.48 HEPCGN_23335 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.43 HEPCGN_01210 pxpC 5-oxoprolinase subunit PxpC low > 87
Escherichia coli ECRC101 0.48 MCAODC_24575 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 MCAODC_26220 pxpC 5-oxoprolinase subunit PxpC low > 87
Escherichia coli ECRC98 0.48 JDDGAC_08795 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 JDDGAC_10655 pxpC 5-oxoprolinase subunit PxpC low > 86
Escherichia coli ECRC100 0.48 OKFHMN_05185 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 OKFHMN_07000 pxpC 5-oxoprolinase subunit PxpC low > 80
Escherichia coli ECRC62 0.48 BNILDI_19905 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 BNILDI_21380 pxpC 5-oxoprolinase subunit PxpC low > 75
Enterobacter asburiae PDN3 0.48 EX28DRAFT_1976 Predicted SAM-dependent methyltransferases 0.42 EX28DRAFT_2275 biotin-dependent carboxylase uncharacterized domain low > 76
Escherichia coli ECOR27 0.48 NOLOHH_21740 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 NOLOHH_23385 pxpC 5-oxoprolinase subunit PxpC low > 75
Escherichia coli ECRC99 0.48 KEDOAH_22550 rlmI 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 KEDOAH_20965 pxpC 5-oxoprolinase subunit PxpC — —
Variovorax sp. SCN45 0.48 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) 0.43 GFF2323 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) — —
Escherichia fergusonii Becca 0.48 EFB2_03104 Ribosomal RNA large subunit methyltransferase I 0.42 EFB2_03391 5-oxoprolinase subunit C low > 86
Variovorax sp. OAS795 0.48 ABID97_RS06155 class I SAM-dependent methyltransferase 0.42 ABID97_RS23845 biotin-dependent carboxyltransferase family protein low > 91
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_02699 Ribosomal RNA large subunit methyltransferase I 0.42 OHPLBJKB_03005 putative protein YbgK low > 73
Enterobacter sp. TBS_079 0.48 MPMX20_01617 Ribosomal RNA large subunit methyltransferase I 0.42 MPMX20_01346 5-oxoprolinase subunit C low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF3258 LSU m5C1962 methyltransferase RlmI 0.41 GFF4617 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 78
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_06820 ribosomal RNA large subunit methyltransferase I 0.28 CSW01_18065 allophanate hydrolase low > 62
Pantoea sp. MT58 0.47 IAI47_12595 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.43 IAI47_13800 biotin-dependent carboxyltransferase family protein low > 76
Rahnella sp. WP5 0.47 EX31_RS17990 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.43 EX31_RS23390 biotin-dependent carboxyltransferase family protein low > 89
Serratia liquefaciens MT49 0.47 IAI46_08925 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI 0.42 IAI46_06220 biotin-dependent carboxyltransferase family protein low > 86
Alteromonas macleodii MIT1002 0.47 MIT1002_01688 Ribosomal RNA large subunit methyltransferase I 0.21 MIT1002_02296 KipI antagonist low > 70
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS19815 RlmI/RlmK family 23S rRNA methyltransferase 0.25 CA265_RS10105 urea amidolyase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS22040 class I SAM-dependent rRNA methyltransferase 0.30 ABZR88_RS12610 biotin-dependent carboxyltransferase family protein low > 71
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_05605 RlmI/RlmK family 23S rRNA methyltransferase 0.33 CA264_08795 KipI antagonist low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.31 Echvi_3350 Predicted SAM-dependent methyltransferases 0.19 Echvi_3008 Allophanate hydrolase subunit 2 low > 79
Lysobacter sp. OAE881 0.26 ABIE51_RS00980 class I SAM-dependent rRNA methyltransferase 0.28 ABIE51_RS08140 biotin-dependent carboxyltransferase family protein low > 62
Fusobacterium nucleatum SB010 0.26 HUW76_04950 class I SAM-dependent rRNA methyltransferase 0.29 HUW76_07950 biotin-dependent carboxyltransferase family protein low > 35
Pseudomonas sp. RS175 0.25 PFR28_04274 Ribosomal RNA large subunit methyltransferase I 0.22 PFR28_00730 5-oxoprolinase subunit C low > 88
Pseudomonas sp. S08-1 0.25 OH686_14110 23S rRNA (cytosine(1962)-C(5))-methyltransferase 0.24 OH686_08740 Allophanate hydrolase 2 subunit 2 low > 80
Magnetospirillum magneticum AMB-1 0.25 AMB_RS22065 class I SAM-dependent rRNA methyltransferase 0.24 AMB_RS15090 allophanate hydrolase low > 64
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_4764 SAM-dependent methyltransferase 0.26 Psyr_2720 Urea amidolyase-related protein 0.50 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_4764 SAM-dependent methyltransferase 0.26 Psyr_2720 Urea amidolyase-related protein low > 86
Pseudomonas putida KT2440 0.25 PP_5127 ribosomal RNA large subunit methyltransferase I 0.26 PP_2922 Urea amidolyase-related protein low > 96
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_977 LSU m5C1962 methyltransferase RlmI 0.22 PfGW456L13_4476 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 87
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_4566 LSU m5C1962 methyltransferase RlmI 0.22 Pf6N2E2_2706 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 103
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_13260 SAM-dependent methyltransferase 0.26 AO356_07585 allophanate hydrolase low > 104
Pseudomonas simiae WCS417 0.25 PS417_26880 SAM-dependent methyltransferase 0.28 PS417_21900 allophanate hydrolase low > 88
Azospirillum sp. SherDot2 0.25 MPMX19_00203 Ribosomal RNA large subunit methyltransferase I 0.28 MPMX19_03380 5-oxoprolinase subunit C low > 112
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_08330 SAM-dependent methyltransferase 0.26 AO353_28800 allophanate hydrolase low > 101
Pseudomonas fluorescens SBW25 0.24 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.34 PFLU_RS19650 biotin-dependent carboxyltransferase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS28525 class I SAM-dependent rRNA methyltransferase 0.34 PFLU_RS19650 biotin-dependent carboxyltransferase family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_2307 LSU m5C1962 methyltransferase RlmI 0.21 Pf1N1B4_3368 Allophanate hydrolase 2 subunit 2 (EC 3.5.1.54) low > 87
Pseudomonas stutzeri RCH2 0.24 Psest_0236 Predicted SAM-dependent methyltransferases 0.25 Psest_1540 biotin-dependent carboxylase uncharacterized domain low > 67
Rhodospirillum rubrum S1H 0.23 Rru_A3333 hypothetical protein (NCBI) 0.21 Rru_A1505 Allophanate hydrolase subunit 2 (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.23 PGA1_c19990 ribosomal RNA large subunit methyltransferase I 0.16 PGA1_c28710 allophanate hydrolase, subunit 2 low > 62
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_16710 rlmK RlmI/RlmK family 23S rRNA methyltransferase 0.24 OKGIIK_04735 AHS2 domain-containing protein low > 52
Marinobacter adhaerens HP15 0.22 HP15_460 SAM-dependent methyltransferase 0.23 HP15_2687 urea amidolyase related protein low > 73
Dinoroseobacter shibae DFL-12 0.22 Dshi_1771 hypothetical protein (RefSeq) 0.19 Dshi_2027 Allophanate hydrolase subunit 2 (RefSeq) low > 64

Not shown: 19 genomes with orthologs for ABZR87_RS05070 only; 11 genomes with orthologs for ABZR87_RS15330 only