Conservation of cofitness between ABZR87_RS01605 and ABZR87_RS09450 in Ralstonia sp. UNC404CL21Col

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS01605 shikimate dehydrogenase 1.0 ABZR87_RS09450 prephenate dehydratase 0.65 8
Ralstonia solanacearum PSI07 0.87 RPSI07_RS11300 shikimate dehydrogenase 0.94 RPSI07_RS19710 prephenate dehydratase 0.76 11
Ralstonia solanacearum GMI1000 0.84 RS_RS13890 shikimate dehydrogenase 0.93 RS_RS04495 prephenate dehydratase 0.59 8
Ralstonia solanacearum UW163 0.82 UW163_RS07680 shikimate dehydrogenase 0.93 UW163_RS16050 chorismate mutase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS05945 shikimate dehydrogenase 0.93 RALBFv3_RS13760 chorismate mutase low > 76
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS27130 shikimate dehydrogenase 0.56 QEN71_RS04070 prephenate dehydratase 0.69 46
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS16975 shikimate 5-dehydrogenase 0.57 BPHYT_RS14910 chorismate mutase 0.77 1
Paraburkholderia graminis OAS925 0.50 ABIE53_003560 shikimate dehydrogenase 0.58 ABIE53_003157 chorismate mutase/prephenate dehydratase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25) 0.58 H281DRAFT_03925 chorismate mutase — —
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS17645 shikimate dehydrogenase 0.75 RR42_RS04460 chorismate mutase 0.78 19
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS01990 shikimate 5-dehydrogenase 0.59 HSERO_RS18430 chorismate mutase 0.76 11
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.46 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.68 2
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.46 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.79 16
Pseudomonas sp. RS175 0.43 PFR28_04655 Shikimate dehydrogenase (NADP(+)) 0.47 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_10670 shikimate dehydrogenase 0.46 AO353_02070 prephenate dehydratase 0.89 1
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_11315 shikimate dehydrogenase 0.46 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.46 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas simiae WCS417 0.42 PS417_00125 shikimate dehydrogenase 0.46 PS417_08125 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0025 shikimate dehydrogenase 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0025 shikimate dehydrogenase 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas sp. S08-1 0.41 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.46 OH686_20870 Chorismate mutase I / Prephenate dehydratase low > 80
Pseudomonas putida KT2440 0.41 PP_0074 shikimate 5-dehydrogenase 0.47 PP_1769 chorismate mutase/Prephenate dehydratase — —
Pseudomonas fluorescens SBW25 0.41 PFLU_RS00120 shikimate dehydrogenase 0.46 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS00120 shikimate dehydrogenase 0.46 PFLU_RS08095 prephenate dehydratase — —
Castellaniella sp019104865 MT123 0.41 ABCV34_RS11630 shikimate dehydrogenase 0.51 ABCV34_RS07110 prephenate dehydratase low > 48
Marinobacter adhaerens HP15 0.40 HP15_3750 shikimate dehydrogenase 0.42 HP15_1362 chorismate mutase / prephenate dehydratase — —
Pseudomonas stutzeri RCH2 0.40 Psest_0029 shikimate 5-dehydrogenase 0.46 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_00280 shikimate dehydrogenase 0.23 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Acidovorax sp. GW101-3H11 0.38 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.51 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.90 16
Escherichia fergusonii Becca 0.36 EFB2_00542 Shikimate dehydrogenase (NADP(+)) 0.23 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Rahnella sp. WP5 0.36 EX31_RS15950 shikimate dehydrogenase 0.20 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase — —
Klebsiella michiganensis M5al 0.36 BWI76_RS25645 shikimate dehydrogenase 0.21 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase 0.69 64
Pantoea sp. MT58 0.36 IAI47_02315 shikimate dehydrogenase 0.22 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC62 0.36 BNILDI_02165 aroE shikimate dehydrogenase 0.23 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase 0.92 18
Escherichia coli ECOR27 0.36 NOLOHH_09355 aroE shikimate dehydrogenase 0.23 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase 0.88 24
Dickeya dadantii 3937 0.36 DDA3937_RS19100 shikimate dehydrogenase 0.21 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase — —
Dickeya dianthicola ME23 0.35 DZA65_RS20315 shikimate dehydrogenase 0.20 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase — —
Dickeya dianthicola 67-19 0.35 HGI48_RS19190 shikimate dehydrogenase 0.20 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC98 0.35 JDDGAC_21185 aroE shikimate dehydrogenase 0.23 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase 0.77 64
Escherichia coli ECRC99 0.35 KEDOAH_10585 aroE shikimate dehydrogenase 0.23 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC102 0.35 NIAGMN_15325 aroE shikimate dehydrogenase 0.23 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC100 0.35 OKFHMN_17565 aroE shikimate dehydrogenase 0.23 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase 0.96 13
Escherichia coli ECRC101 0.35 MCAODC_08085 aroE shikimate dehydrogenase 0.23 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase 0.84 20
Serratia liquefaciens MT49 0.35 IAI46_23240 shikimate dehydrogenase 0.20 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase 0.57 66
Escherichia coli BW25113 0.35 b3281 aroE dehydroshikimate reductase, NAD(P)-binding (NCBI) 0.23 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.92 28
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_00422 Shikimate dehydrogenase (NADP(+)) 0.23 OHPLBJKB_01109 P-protein low > 73
Escherichia coli BL21 0.35 ECD_03132 dehydroshikimate reductase, NAD(P)-binding 0.23 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.62 15
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.19 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Escherichia coli ECOR38 0.35 HEPCGN_16385 aroE shikimate dehydrogenase 0.23 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase 0.81 34
Variovorax sp. SCN45 0.34 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.51 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Erwinia tracheiphila SCR3 0.34 LU632_RS22445 aroE shikimate dehydrogenase 0.22 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase 0.63 6
Pectobacterium carotovorum WPP14 0.33 HER17_RS02250 shikimate dehydrogenase 0.20 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.94 14
Variovorax sp. OAS795 0.32 ABID97_RS06300 shikimate dehydrogenase 0.51 ABID97_RS09515 prephenate dehydratase — —
Acinetobacter radioresistens SK82 0.31 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) 0.40 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase 0.96 1
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.42 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.84 21
Kangiella aquimarina DSM 16071 0.29 B158DRAFT_0259 shikimate 5-dehydrogenase 0.18 B158DRAFT_1385 Prephenate dehydratase low > 40
Lysobacter sp. OAE881 0.28 ABIE51_RS01815 shikimate dehydrogenase 0.42 ABIE51_RS12145 prephenate dehydratase 0.73 10
Alteromonas macleodii MIT1002 0.28 MIT1002_00029 Shikimate dehydrogenase 0.23 MIT1002_01316 P-protein — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS14985 shikimate dehydrogenase 0.42 ABZR86_RS02225 prephenate dehydratase 0.98 4
Desulfovibrio vulgaris Hildenborough JW710 0.19 DVU0115 aroE shikimate 5-dehydrogenase (TIGR) 0.34 DVU0462 chorismate mutase/prephenate dehydratase (TIGR) — —
Desulfovibrio vulgaris Miyazaki F 0.16 DvMF_1962 shikimate 5-dehydrogenase (RefSeq) 0.33 DvMF_1749 prephenate dehydratase (RefSeq) — —

Not shown: 31 genomes with orthologs for ABZR87_RS01605 only; 8 genomes with orthologs for ABZR87_RS09450 only