Conservation of cofitness between ABZR87_RS01855 and ABZR87_RS03460 in Ralstonia sp. UNC404CL21Col

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS01855 A24 family peptidase 1.0 ABZR87_RS03460 type II secretion system inner membrane protein GspF 0.71 9
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS06190 prepilin peptidase 0.93 RALBFv3_RS07755 type II secretion system protein GspF 0.78 2
Ralstonia solanacearum UW163 0.86 UW163_RS07435 prepilin peptidase 0.93 UW163_RS05870 type II secretion system protein GspF — —
Ralstonia solanacearum GMI1000 0.83 RS_RS14140 prepilin peptidase 0.93 RS_RS15650 type II secretion system protein GspF 0.46 15
Ralstonia solanacearum PSI07 0.83 RPSI07_RS11050 prepilin peptidase 0.92 RPSI07_RS09505 type II secretion system protein GspF 0.59 3
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS17990 methyltransferase 0.78 RR42_RS19530 general secretion pathway protein GspF 0.89 5
Pseudomonas sp. S08-1 0.48 OH686_16495 Leader peptidase (Prepilin peptidase) / N-methyltransferase 0.42 OH686_11780 type II secretion system protein F — —
Pseudomonas fluorescens GW456-L13 0.48 PfGW456L13_1508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.42 PfGW456L13_264 General secretion pathway protein F low > 87
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS27315 A24 family peptidase 0.68 QEN71_RS29520 type II secretion system inner membrane protein GspF low > 153
Vibrio cholerae E7946 ATCC 55056 0.46 CSW01_12285 prepilin peptidase 0.42 CSW01_13780 type II secretion system protein GspF — —
Pseudomonas fluorescens SBW25 0.46 PFLU_RS03940 prepilin peptidase 0.54 PFLU_RS11900 type II secretion system protein GspF low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS03940 prepilin peptidase 0.54 PFLU_RS11900 type II secretion system protein GspF low > 109
Pseudomonas putida KT2440 0.45 PP_0632 leader peptidase/N-methyltransferase 0.32 PP_1048 putative protein secretion protein for export low > 96
Pseudomonas stutzeri RCH2 0.45 Psest_3286 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.47 Psest_4201 general secretion pathway protein F low > 67
Pseudomonas simiae WCS417 0.44 PS417_03895 methyltransferase 0.53 PS417_11305 general secretion pathway protein GspF low > 88
Shewanella sp. ANA-3 0.44 Shewana3_0417 type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A (RefSeq) 0.43 Shewana3_0153 general secretion pathway protein F (RefSeq) 0.80 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF1281 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.47 GFF1392 General secretion pathway protein F / Type II secretory pathway, component PulF low > 90
Shewanella oneidensis MR-1 0.43 SO0414 pilD type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) 0.42 SO0168 gspF general secretion pathway protein F (NCBI ptt file) 0.87 1
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS17155 peptidase A24 0.69 BPHYT_RS19605 general secretion pathway protein F 0.54 1
Marinobacter adhaerens HP15 0.43 HP15_2411 type IV pilus prepilin peptidase PilD 0.48 HP15_1603 general secretion pathway protein F 0.78 3
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2140 type 4 prepilin peptidase 1 (EC:3.4.23.43). Aspartic peptidase. MEROPS family A24A 0.40 B158DRAFT_0691 general secretion pathway protein F — —
Shewanella amazonensis SB2B 0.43 Sama_0367 prepilin peptidase (RefSeq) 0.42 Sama_0171 general secretion pathway protein F (RefSeq) 0.75 4
Paraburkholderia graminis OAS925 0.42 ABIE53_003596 leader peptidase (prepilin peptidase)/N-methyltransferase 0.69 ABIE53_000298 general secretion pathway protein F 0.91 1
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_06255 leader peptidase (prepilin peptidase) / N-methyltransferase 0.68 H281DRAFT_02354 general secretion pathway protein F 0.63 2
Acidovorax sp. GW101-3H11 0.42 Ac3H11_4764 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.49 Ac3H11_4054 General secretion pathway protein F / Type II secretory pathway, component PulF — —
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_16005 methyltransferase 0.53 AO356_24800 type II secretion system protein GspF low > 104
Pseudomonas fluorescens FW300-N2E3 0.41 AO353_14320 methyltransferase 0.41 AO353_12555 type II secretion system protein GspF low > 101
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_5140 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.54 Pf6N2E2_653 General secretion pathway protein F low > 103
Pseudomonas sp. RS175 0.41 PFR28_03733 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.52 PFR28_01752 Type II secretion system protein F low > 88
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS10050 A24 family peptidase 0.25 ABZR86_RS13110 type II secretion system inner membrane protein GspF 0.65 9
Shewanella loihica PV-4 0.40 Shew_3440 prepilin peptidase (RefSeq) 0.44 Shew_3617 general secretion pathway protein F (RefSeq) low > 60
Dickeya dadantii 3937 0.39 DDA3937_RS14750 prepilin peptidase 0.42 DDA3937_RS14790 type II secretion system inner membrane protein GspF 0.41 56
Alteromonas macleodii MIT1002 0.38 MIT1002_03011 Pectic enzymes secretion protein OutO 0.40 MIT1002_03978 General secretion pathway protein F — —
Variovorax sp. SCN45 0.38 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.48 GFF5233 General secretion pathway protein F / Type II secretory pathway, component PulF low > 127
Dickeya dianthicola 67-19 0.38 HGI48_RS14685 prepilin peptidase 0.42 HGI48_RS14725 type II secretion system inner membrane protein GspF low > 71
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_10830 pulO prepilin peptidase 0.24 OKGIIK_16220 gspF type II secretion system inner membrane protein GspF low > 52
Pectobacterium carotovorum WPP14 0.38 HER17_RS06740 A24 family peptidase 0.42 HER17_RS06695 type II secretion system inner membrane protein GspF low > 75
Acinetobacter radioresistens SK82 0.38 MPMX26_00244 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.39 MPMX26_00283 Type II secretion system protein F low > 36
Variovorax sp. OAS795 0.38 ABID97_RS23440 A24 family peptidase 0.48 ABID97_RS06940 type II secretion system inner membrane protein GspF low > 91
Dickeya dianthicola ME23 0.37 DZA65_RS15630 prepilin peptidase 0.42 DZA65_RS15670 type II secretion system inner membrane protein GspF low > 75
Rhodanobacter denitrificans MT42 0.36 LRK55_RS03730 A24 family peptidase 0.24 LRK55_RS09605 type II secretion system inner membrane protein GspF low > 63
Rhodanobacter denitrificans FW104-10B01 0.36 LRK54_RS03960 A24 family peptidase 0.25 LRK54_RS09965 type II secretion system inner membrane protein GspF low > 59
Klebsiella michiganensis M5al 0.35 BWI76_RS05035 prepilin peptidase 0.39 BWI76_RS05080 type II secretion protein F — —
Rahnella sp. WP5 0.35 EX31_RS16215 prepilin peptidase 0.33 EX31_RS16175 type II secretion system inner membrane protein GspF low > 89
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.1345.1 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) 0.32 Xcc-8004.944.1 General secretion pathway protein F — —
Enterobacter sp. TBS_079 0.32 MPMX20_01525 Type 4 prepilin-like proteins leader peptide-processing enzyme 0.33 MPMX20_01517 Putative type II secretion system protein F low > 85
Escherichia coli ECRC98 0.31 JDDGAC_30345 pulO prepilin peptidase 0.38 JDDGAC_30305 gspF type II secretion system inner membrane protein GspF low > 86
Escherichia coli ECRC100 0.31 OKFHMN_00235 pulO prepilin peptidase 0.38 OKFHMN_00275 gspF type II secretion system inner membrane protein GspF low > 80
Escherichia coli ECRC101 0.31 MCAODC_15315 pulO prepilin peptidase 0.38 MCAODC_15275 gspF type II secretion system inner membrane protein GspF low > 87
Escherichia coli ECRC102 0.31 NIAGMN_28555 pulO prepilin peptidase 0.38 NIAGMN_28595 gspF type II secretion system inner membrane protein GspF — —
Erwinia tracheiphila SCR3 0.31 LU632_RS25275 A24 family peptidase 0.33 LU632_RS25240 gspF type II secretion system inner membrane protein GspF low > 74
Enterobacter asburiae PDN3 0.30 EX28DRAFT_2069 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases 0.34 EX28DRAFT_2077 type II secretion system protein F low > 76
Escherichia coli Nissle 1917 0.27 ECOLIN_RS17100 prepilin peptidase PppA 0.36 ECOLIN_RS17075 type II secretion system inner membrane protein GspF low > 55
Escherichia coli ECOR38 0.27 HEPCGN_18035 pppA prepilin peptidase PppA 0.36 HEPCGN_18060 gspF general secretion pathway protein F 0.89 8
Escherichia coli BL21 0.27 ECD_02841 bifunctional prepilin leader peptidase/ methylase 0.36 ECD_02836 putative type II secretion protein GspF 0.92 5
Escherichia fergusonii Becca 0.27 EFB2_00842 Prepilin peptidase PppA 0.36 EFB2_00847 Type II secretion system protein F low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00736 Leader peptidase PppA 0.36 OHPLBJKB_00741 Type II secretion system protein F low > 73
Escherichia coli BW25113 0.26 b2972 b2972 putative peptidase (VIMSS) 0.34 b3327 gspF general secretory pathway component, cryptic (NCBI) low > 76

Not shown: 11 genomes with orthologs for ABZR87_RS01855 only; 4 genomes with orthologs for ABZR87_RS03460 only