Conservation of cofitness between A4249_RS06610 and A4249_RS07640 in Brevundimonas sp. GW460-12-10-14-LB2

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Brevundimonas sp. GW460-12-10-14-LB2 1.0 A4249_RS06610 histidine utilization repressor 1.0 A4249_RS07640 MFS transporter 0.57 2
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_01013 histidine utilization repressor 0.76 CCNA_01576 major facilitator superfamily transporter low > 67
Caulobacter crescentus NA1000 0.54 CCNA_01013 histidine utilization repressor 0.76 CCNA_01576 major facilitator superfamily transporter low > 66
Xanthomonas campestris pv. campestris strain 8004 0.43 Xcc-8004.3293.1 Histidine utilization repressor 0.53 Xcc-8004.5239.1 Hexuronate transporter low > 74
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_3966 Transcriptional regulators 0.61 Ga0059261_2977 Sugar phosphate permease low > 68
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS16925 histidine utilization repressor 0.25 RR42_RS11305 hexuronate transporter low > 128
Pseudomonas simiae WCS417 0.29 PS417_01710 histidine utilization repressor 0.39 PS417_14775 major facilitator transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS01765 histidine utilization repressor 0.40 PFLU_RS16770 MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS01765 histidine utilization repressor 0.40 PFLU_RS16770 MFS transporter low > 109
Variovorax sp. SCN45 0.28 GFF6410 Histidine utilization repressor 0.13 GFF7272 D-glucarate permease low > 127
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS07755 histidine utilization repressor 0.47 QEN71_RS37700 MFS transporter low > 153
Dickeya dadantii 3937 0.28 DDA3937_RS15020 histidine utilization repressor 0.23 DDA3937_RS02820 MFS transporter low > 74
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_05296 GntR family transcriptional regulator, histidine utilization repressor 0.49 H281DRAFT_03828 MFS transporter, ACS family, hexuronate transporter low > 103
Enterobacter sp. TBS_079 0.27 MPMX20_01398 HTH-type transcriptional repressor NagR 0.23 MPMX20_04002 Hexuronate transporter low > 85
Paraburkholderia graminis OAS925 0.27 ABIE53_006530 GntR family histidine utilization transcriptional repressor 0.48 ABIE53_003984 ACS family hexuronate transporter-like MFS transporter low > 113
Dickeya dianthicola 67-19 0.27 HGI48_RS15100 histidine utilization repressor 0.23 HGI48_RS02795 MFS transporter low > 71
Dickeya dianthicola ME23 0.27 DZA65_RS15850 histidine utilization repressor 0.24 DZA65_RS02950 MFS transporter low > 75
Pantoea sp. MT58 0.26 IAI47_13270 histidine utilization repressor 0.23 IAI47_02905 MFS transporter low > 76
Pseudomonas putida KT2440 0.26 PP_5035 Histidine utilization repressor 0.40 PP_2604 major facilitator family transporter low > 96
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS24030 histidine utilization repressor 0.43 BPHYT_RS31135 hexuranate MFS transporter — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0366 transcriptional regulator, GntR family 0.40 Psyr_2129 Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0366 transcriptional regulator, GntR family 0.40 Psyr_2129 Major facilitator superfamily low > 86
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_329 Histidine utilization repressor 0.39 PfGW456L13_1423 Hexuronate transporter low > 87
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_12240 histidine utilization repressor 0.39 AO353_06195 hypothetical protein low > 101
Rahnella sp. WP5 0.26 EX31_RS06725 histidine utilization repressor 0.23 EX31_RS12670 MFS transporter low > 89
Pseudomonas sp. RS175 0.26 PFR28_04963 HTH-type transcriptional repressor NagR 0.39 PFR28_03815 Hexuronate transporter low > 88
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_09640 histidine utilization repressor 0.39 AO356_15575 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.26 Pf1N1B4_1590 Histidine utilization repressor 0.39 Pf1N1B4_2746 Hexuronate transporter low > 87
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3807 Histidine utilization repressor 0.39 Pf6N2E2_5056 Hexuronate transporter low > 103
Enterobacter asburiae PDN3 0.25 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.23 EX28DRAFT_3161 D-galactonate transporter low > 76
Vibrio cholerae E7946 ATCC 55056 0.25 CSW01_06100 histidine utilization repressor 0.08 CSW01_17615 MFS transporter family glucose-6-phosphate receptor UhpC low > 62
Klebsiella michiganensis M5al 0.25 BWI76_RS08730 histidine utilization repressor 0.23 BWI76_RS24735 MFS transporter low > 92
Serratia liquefaciens MT49 0.25 IAI46_10615 histidine utilization repressor 0.23 IAI46_22225 MFS transporter low > 86
Pseudomonas sp. S08-1 0.24 OH686_16760 histidine utilization repressor 0.13 OH686_06110 Uncharacterized MFS-type transporter low > 80
Ralstonia solanacearum GMI1000 0.23 RS_RS13260 histidine utilization repressor 0.38 RS_RS23860 MFS transporter low > 80
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS05400 histidine utilization repressor 0.38 RALBFv3_RS17455 MFS transporter low > 76
Ralstonia solanacearum UW163 0.23 UW163_RS08225 histidine utilization repressor 0.38 UW163_RS21695 MFS transporter — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF665 Histidine utilization repressor 0.24 GFF3092 Hexuronate transporter low > 78
Ralstonia solanacearum PSI07 0.22 RPSI07_RS11905 histidine utilization repressor 0.38 RPSI07_RS06195 MFS transporter low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.21 GFF3591 Histidine utilization repressor 0.09 GFF4428 Nitrate/nitrite transporter low > 90
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS01035 histidine utilization repressor 0.28 ABZR87_RS20305 MFS transporter low > 80
Lysobacter sp. OAE881 0.20 ABIE51_RS01625 GntR family transcriptional regulator 0.52 ABIE51_RS03695 MFS transporter low > 62
Castellaniella sp019104865 MT123 0.17 ABCV34_RS12825 histidine utilization repressor 0.06 ABCV34_RS12010 nitrate/nitrite transporter low > 48
Rhodanobacter denitrificans FW104-10B01 0.15 LRK54_RS07865 GntR family transcriptional regulator 0.08 LRK54_RS14015 NarK/NasA family nitrate transporter low > 59
Rhodanobacter denitrificans MT42 0.15 LRK55_RS07595 GntR family transcriptional regulator 0.08 LRK55_RS13735 nitrate/nitrite transporter low > 63
Rhodanobacter sp. FW510-T8 0.15 OKGIIK_14355 mngR GntR family transcriptional regulator 0.08 OKGIIK_05325 MFS transporter low > 52
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS14920 GntR family transcriptional regulator 0.28 HSERO_RS23010 D-galacturonate transporter ExuT (from data) — —
Azospirillum brasilense Sp245 0.12 AZOBR_RS15620 GntR family transcriptional regulator 0.24 AZOBR_RS23835 hexuronate transporter ExuT low > 97

Not shown: 16 genomes with orthologs for A4249_RS06610 only; 28 genomes with orthologs for A4249_RS07640 only