Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Brevundimonas sp. GW460-12-10-14-LB2 | 1.0 | A4249_RS00615 | | threonine ammonia-lyase, biosynthetic | 1.0 | A4249_RS05460 | | iron ABC transporter permease | 0.99 | 20 |
Azospirillum sp. SherDot2 | 0.60 | MPMX19_02807 | | L-threonine dehydratase biosynthetic IlvA | 0.17 | MPMX19_05164 | | putative ABC transporter permease protein | low | > 112 |
Pseudomonas stutzeri RCH2 | 0.58 | Psest_3866 | | threonine ammonia-lyase, biosynthetic, long form | 0.19 | Psest_1024 | | ABC-type Fe3+-siderophore transport system, permease component | low | > 67 |
Castellaniella sp019104865 MT123 | 0.58 | ABCV34_RS14460 | | threonine ammonia-lyase, biosynthetic | 0.21 | ABCV34_RS11140 | | iron ABC transporter permease | low | > 48 |
Acidovorax sp. GW101-3H11 | 0.56 | Ac3H11_2042 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.20 | Ac3H11_989 | | Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) | low | > 79 |
Dechlorosoma suillum PS | 0.56 | Dsui_0728 | | threonine ammonia-lyase, biosynthetic, long form | 0.19 | Dsui_0530 | | ABC-type Fe3+-siderophore transport system, permease component | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.56 | AO353_08485 | | threonine dehydratase | 0.21 | AO353_13550 | | ABC transporter permease | — | — |
Marinobacter adhaerens HP15 | 0.55 | HP15_3213 | | threonine dehydratase biosynthetic | 0.21 | HP15_3582 | | transport system permease protein | low | > 73 |
Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_949 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.21 | PfGW456L13_80 | | ABC transporter (iron.B12.siderophore.hemin) , permease component | low | > 87 |
Pseudomonas putida KT2440 | 0.55 | PP_5149 | | threonine deaminase | 0.20 | PP_2417 | | putative Iron ABC transporter, permease protein | low | > 96 |
Pseudomonas fluorescens SBW25 | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.23 | PFLU_RS20715 | | iron ABC transporter permease | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.55 | PFLU_RS28665 | | threonine ammonia-lyase, biosynthetic | 0.23 | PFLU_RS20715 | | iron ABC transporter permease | low | > 109 |
Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_2280 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.22 | Pf1N1B4_4814 | | Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) | low | > 87 |
Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_3938 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.22 | Pf6N2E2_1686 | | Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_10330 | | threonine dehydratase | 0.23 | AO356_16425 | | ABC transporter permease | low | > 104 |
Ralstonia solanacearum GMI1000 | 0.54 | RS_RS02225 | | threonine ammonia-lyase, biosynthetic | 0.15 | RS_RS12045 | | iron ABC transporter permease | — | — |
Pseudomonas sp. RS175 | 0.54 | PFR28_04834 | | L-threonine dehydratase biosynthetic IlvA | 0.21 | PFR28_05188 | | Hemin transport system permease protein HmuU | — | — |
Variovorax sp. SCN45 | 0.54 | GFF5246 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.20 | GFF446 | | Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) | low | > 127 |
Pseudomonas simiae WCS417 | 0.54 | PS417_27010 | | threonine dehydratase | 0.23 | PS417_18730 | | ABC transporter permease | low | > 88 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.25 | Psyr_3095 | | transport system permease protein | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_4846 | | L-threonine ammonia-lyase | 0.25 | Psyr_3095 | | transport system permease protein | low | > 86 |
Ralstonia solanacearum PSI07 | 0.54 | RPSI07_RS21810 | | threonine ammonia-lyase, biosynthetic | 0.21 | RPSI07_RS00910 | | iron ABC transporter permease | low | > 81 |
Paraburkholderia sabiae LMG 24235 | 0.54 | QEN71_RS01985 | | threonine ammonia-lyase, biosynthetic | 0.19 | QEN71_RS31160 | | iron ABC transporter permease | low | > 153 |
Paraburkholderia graminis OAS925 | 0.54 | ABIE53_002293 | | threonine dehydratase | 0.15 | ABIE53_001247 | | iron complex transport system permease protein | low | > 113 |
Herbaspirillum seropedicae SmR1 | 0.54 | HSERO_RS19510 | | threonine dehydratase | 0.20 | HSERO_RS21915 | | iron-siderophore ABC transporter permease | low | > 78 |
Cupriavidus basilensis FW507-4G11 | 0.54 | RR42_RS02315 | | threonine dehydratase | 0.18 | RR42_RS16135 | | ABC transporter permease | low | > 128 |
Ralstonia sp. UNC404CL21Col | 0.53 | ABZR87_RS07360 | | threonine ammonia-lyase, biosynthetic | 0.17 | ABZR87_RS00090 | | iron ABC transporter permease | low | > 80 |
Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS15925 | | threonine ammonia-lyase, biosynthetic | 0.18 | ABZR86_RS04590 | | iron ABC transporter permease | low | > 74 |
Variovorax sp. OAS795 | 0.53 | ABID97_RS07000 | | threonine ammonia-lyase, biosynthetic | 0.17 | ABID97_RS17405 | | iron ABC transporter permease | — | — |
Dickeya dadantii 3937 | 0.53 | DDA3937_RS20150 | | threonine ammonia-lyase, biosynthetic | 0.22 | DDA3937_RS14665 | | Fe(3+)-siderophore ABC transporter permease | low | > 74 |
Dickeya dianthicola 67-19 | 0.53 | HGI48_RS20290 | | threonine ammonia-lyase, biosynthetic | 0.23 | HGI48_RS14610 | | Fe(3+)-siderophore ABC transporter permease | low | > 71 |
Shewanella amazonensis SB2B | 0.53 | Sama_3278 | | threonine dehydratase (RefSeq) | 0.20 | Sama_0761 | | iron-compound ABC transporter, permease protein (RefSeq) | low | > 62 |
Ralstonia solanacearum IBSBF1503 | 0.52 | RALBFv3_RS11395 | | threonine ammonia-lyase, biosynthetic | 0.16 | RALBFv3_RS04490 | | iron ABC transporter permease | low | > 76 |
Ralstonia solanacearum UW163 | 0.52 | UW163_RS02190 | | threonine ammonia-lyase, biosynthetic | 0.16 | UW163_RS09180 | | iron ABC transporter permease | — | — |
Shewanella oneidensis MR-1 | 0.52 | SO4344 | ilvA | threonine dehydratase (NCBI ptt file) | 0.22 | SO1034 | | iron-compound ABC transporter, permease protein (NCBI ptt file) | low | > 76 |
Escherichia coli ECOR27 | 0.51 | NOLOHH_06770 | ilvA | threonine ammonia-lyase, biosynthetic | 0.20 | NOLOHH_17620 | btuC | vitamin B12 ABC transporter permease BtuC | low | > 75 |
Escherichia coli ECRC100 | 0.51 | OKFHMN_14635 | ilvA | threonine ammonia-lyase, biosynthetic | 0.25 | OKFHMN_16325 | chuU | heme permease protein ChuU | low | > 80 |
Escherichia coli BW25113 | 0.51 | b3772 | ilvA | threonine dehydratase (NCBI) | 0.21 | b4288 | fecD | KpLE2 phage-like element; iron-dicitrate transporter subunit (NCBI) | low | > 76 |
Escherichia coli ECRC101 | 0.51 | MCAODC_05140 | ilvA | threonine ammonia-lyase, biosynthetic | 0.25 | MCAODC_06840 | chuU | heme permease protein ChuU | low | > 87 |
Escherichia coli ECRC62 | 0.51 | BNILDI_04755 | ilvA | threonine ammonia-lyase, biosynthetic | 0.16 | BNILDI_21975 | fepD | ferrienterobactin ABC transporter permease | low | > 75 |
Escherichia coli ECRC102 | 0.51 | NIAGMN_12390 | ilvA | threonine ammonia-lyase, biosynthetic | 0.25 | NIAGMN_14090 | chuU | heme permease protein ChuU | — | — |
Escherichia coli ECOR38 | 0.51 | HEPCGN_13345 | ilvA | threonine ammonia-lyase, biosynthetic | 0.24 | HEPCGN_15225 | shuU | heme ABC transporter permease ShuU/ChuU | low | > 87 |
Escherichia coli ECRC98 | 0.51 | JDDGAC_18255 | ilvA | threonine ammonia-lyase, biosynthetic | 0.25 | JDDGAC_19955 | chuU | heme permease protein ChuU | low | > 86 |
Escherichia coli ECRC99 | 0.51 | KEDOAH_13515 | ilvA | threonine ammonia-lyase, biosynthetic | 0.25 | KEDOAH_11820 | chuU | heme permease protein ChuU | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.51 | OHPLBJKB_04281 | | L-threonine dehydratase biosynthetic IlvA | 0.20 | OHPLBJKB_02022 | | Vitamin B12 import system permease protein BtuC | low | > 73 |
Escherichia coli BL21 | 0.51 | ECD_03650 | | l-threonine dehydratase, biosynthetic; also known as threonine deaminase | 0.21 | ECD_04154 | | ferric citrate ABC transporter permease | low | > 61 |
Klebsiella michiganensis M5al | 0.51 | BWI76_RS00980 | | PLP-dependent threonine dehydratase | 0.24 | BWI76_RS17110 | | vitamin B12 ABC transporter permease BtuC | low | > 92 |
Escherichia coli Nissle 1917 | 0.51 | ECOLIN_RS21670 | | threonine ammonia-lyase, biosynthetic | 0.25 | ECOLIN_RS20060 | | heme ABC transporter permease ShuU/ChuU | low | > 55 |
Escherichia fergusonii Becca | 0.51 | EFB2_04864 | | L-threonine dehydratase biosynthetic IlvA | 0.24 | EFB2_00303 | | Hemin transport system permease protein HmuU | low | > 86 |
Rhodanobacter sp. FW510-T8 | 0.50 | OKGIIK_13620 | ilvA | threonine ammonia-lyase, biosynthetic | 0.17 | OKGIIK_05365 | | Fe3+-siderophore ABC transporter permease | low | > 52 |
Enterobacter asburiae PDN3 | 0.50 | EX28DRAFT_4444 | | threonine ammonia-lyase, biosynthetic, long form | 0.25 | EX28DRAFT_1718 | | ABC-type cobalamin transport system, permease component | low | > 76 |
Pantoea sp. MT58 | 0.50 | IAI47_01040 | | threonine ammonia-lyase, biosynthetic | 0.23 | IAI47_03525 | | iron ABC transporter permease | low | > 76 |
Erwinia tracheiphila SCR3 | 0.50 | LU632_RS24395 | ilvA | threonine ammonia-lyase, biosynthetic | 0.24 | LU632_RS20345 | | iron ABC transporter permease | low | > 74 |
Enterobacter sp. TBS_079 | 0.50 | MPMX20_04498 | | L-threonine dehydratase biosynthetic IlvA | 0.24 | MPMX20_01902 | | Vitamin B12 import system permease protein BtuC | low | > 85 |
Shewanella loihica PV-4 | 0.50 | Shew_0293 | | threonine dehydratase (RefSeq) | 0.23 | Shew_0713 | | transport system permease protein (RefSeq) | low | > 60 |
Serratia liquefaciens MT49 | 0.50 | IAI46_24340 | | threonine ammonia-lyase, biosynthetic | 0.25 | IAI46_11075 | | iron ABC transporter permease | low | > 86 |
Dickeya dianthicola ME23 | 0.50 | DZA65_RS21330 | | threonine ammonia-lyase, biosynthetic | 0.23 | DZA65_RS15550 | | Fe(3+)-siderophore ABC transporter permease | low | > 75 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF2900 | | Threonine dehydratase biosynthetic (EC 4.3.1.19) | 0.23 | GFF3529 | | Vitamin B12 ABC transporter, permease component BtuC | low | > 78 |
Vibrio cholerae E7946 ATCC 55056 | 0.49 | CSW01_00135 | | threonine ammonia-lyase, biosynthetic | 0.24 | CSW01_06285 | | vitamin B12 ABC transporter permease BtuC | low | > 62 |
Pectobacterium carotovorum WPP14 | 0.49 | HER17_RS01080 | | threonine ammonia-lyase, biosynthetic | 0.23 | HER17_RS08820 | | vitamin B12 ABC transporter permease BtuC | low | > 75 |
Rahnella sp. WP5 | 0.49 | EX31_RS15010 | | threonine ammonia-lyase, biosynthetic | 0.24 | EX31_RS13960 | | iron ABC transporter permease | low | > 89 |
Alteromonas macleodii MIT1002 | 0.47 | MIT1002_04040 | | L-threonine dehydratase biosynthetic IlvA | 0.19 | MIT1002_01385 | | Hemin transport system permease protein HmuU | low | > 70 |
Acinetobacter radioresistens SK82 | 0.45 | MPMX26_01278 | | L-threonine dehydratase biosynthetic IlvA | 0.12 | MPMX26_01195 | | Petrobactin import system permease protein YclN | — | — |
Not shown: 6 genomes with orthologs for A4249_RS00615 only; 21 genomes with orthologs for A4249_RS05460 only