Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella amazonensis SB2B | 1.0 | Sama_2008 | | cystathionine beta-lyase (RefSeq) | 1.0 | Sama_3169 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.82 | 18 |
Shewanella oneidensis MR-1 | 0.83 | SO2191 | metC | cystathionine beta-lyase (NCBI ptt file) | 0.92 | SO4054 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) | 0.98 | 2 |
Shewanella sp. ANA-3 | 0.82 | Shewana3_2414 | | cystathionine beta-lyase (RefSeq) | 0.92 | Shewana3_3612 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.92 | 6 |
Shewanella loihica PV-4 | 0.82 | Shew_1789 | | cystathionine beta-lyase (RefSeq) | 0.91 | Shew_0522 | metF | 5,10-methylenetetrahydrofolate reductase (RefSeq) | 0.98 | 2 |
Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_08400 | | cystathionine beta-lyase | 0.77 | CSW01_13560 | | methylenetetrahydrofolate reductase | low | > 62 |
Dickeya dadantii 3937 | 0.55 | DDA3937_RS01815 | | cystathionine beta-lyase | 0.76 | DDA3937_RS00960 | | methylenetetrahydrofolate reductase | low | > 74 |
Dickeya dianthicola 67-19 | 0.55 | HGI48_RS01710 | | cystathionine beta-lyase | 0.76 | HGI48_RS20415 | | methylenetetrahydrofolate reductase | low | > 71 |
Dickeya dianthicola ME23 | 0.55 | DZA65_RS01785 | | cystathionine beta-lyase | 0.76 | DZA65_RS21460 | | methylenetetrahydrofolate reductase | 0.75 | 52 |
Pectobacterium carotovorum WPP14 | 0.54 | HER17_RS19690 | | cystathionine beta-lyase | 0.74 | HER17_RS00950 | | methylenetetrahydrofolate reductase | low | > 75 |
Serratia liquefaciens MT49 | 0.53 | IAI46_21725 | | cystathionine beta-lyase | 0.75 | IAI46_24530 | | methylenetetrahydrofolate reductase | low | > 86 |
Rahnella sp. WP5 | 0.52 | EX31_RS08025 | | cystathionine beta-lyase | 0.76 | EX31_RS14205 | | methylenetetrahydrofolate reductase | low | > 89 |
Escherichia coli ECRC99 | 0.52 | KEDOAH_09185 | metC | cystathionine beta-lyase | 0.76 | KEDOAH_14495 | metF | methylenetetrahydrofolate reductase | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF3120 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.77 | GFF2329 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 78 |
Escherichia coli ECRC101 | 0.52 | OKFHMN_18960 | metC | cystathionine beta-lyase | 0.76 | OKFHMN_13665 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS17315 | | cystathionine beta-lyase | 0.76 | ECOLIN_RS22760 | | methylenetetrahydrofolate reductase | low | > 52 |
Escherichia coli ECRC101 | 0.52 | MCAODC_09475 | metC | cystathionine beta-lyase | 0.76 | MCAODC_04165 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECRC98 | 0.52 | JDDGAC_22595 | metC | cystathionine beta-lyase | 0.76 | JDDGAC_17290 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia fergusonii Becca | 0.52 | EFB2_00802 | | Cystathionine beta-lyase MetC | 0.76 | EFB2_04672 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Escherichia coli ECRC102 | 0.52 | NIAGMN_16725 | metC | cystathionine beta-lyase | 0.76 | NIAGMN_11420 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli ECOR38 | 0.52 | HEPCGN_17825 | metC | cystathionine beta-lyase | 0.76 | HEPCGN_12310 | metF | methylenetetrahydrofolate reductase | low | > 85 |
Escherichia coli ECOR27 | 0.52 | NOLOHH_10735 | metC | cystathionine beta-lyase | 0.76 | NOLOHH_05810 | metF | methylenetetrahydrofolate reductase | low | > 57 |
Escherichia coli BL21 | 0.52 | ECD_02881 | | cystathionine beta-lyase, PLP-dependent | 0.76 | ECD_03827 | | 5,10-methylenetetrahydrofolate reductase | low | > 60 |
Escherichia coli ECRC62 | 0.52 | BNILDI_00780 | metC | cystathionine beta-lyase | 0.76 | BNILDI_05725 | metF | methylenetetrahydrofolate reductase | — | — |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_00693 | | Cystathionine beta-lyase MetC | 0.76 | OHPLBJKB_04109 | | 5,10-methylenetetrahydrofolate reductase | low | > 73 |
Escherichia coli BW25113 | 0.51 | b3008 | metC | cystathionine beta-lyase (NCBI) | 0.76 | b3941 | metF | 5,10-methylenetetrahydrofolate reductase (NCBI) | 0.93 | 17 |
Klebsiella michiganensis M5al | 0.51 | BWI76_RS24285 | | cystathionine beta-lyase | 0.76 | BWI76_RS00805 | | 5,10-methylenetetrahydrofolate reductase | 0.91 | 12 |
Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_3046 | | cystathionine beta-lyase, bacterial | 0.76 | EX28DRAFT_4413 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | 0.56 | 68 |
Enterobacter sp. TBS_079 | 0.50 | MPMX20_03852 | | Cystathionine beta-lyase MetC | 0.75 | MPMX20_04529 | | 5,10-methylenetetrahydrofolate reductase | 0.79 | 58 |
Sphingomonas koreensis DSMZ 15582 | 0.50 | Ga0059261_1388 | | cystathionine beta-lyase, bacterial | 0.54 | Ga0059261_0992 | | 5,10-methylenetetrahydrofolate reductase, prokaryotic form | low | > 68 |
Magnetospirillum magneticum AMB-1 | 0.50 | AMB_RS06585 | | cystathionine beta-lyase | 0.54 | AMB_RS02230 | | methylenetetrahydrofolate reductase | — | — |
Erwinia tracheiphila SCR3 | 0.49 | LU632_RS20545 | metC | cystathionine beta-lyase | 0.75 | LU632_RS19630 | metF | methylenetetrahydrofolate reductase | low | > 74 |
Rhodopseudomonas palustris CGA009 | 0.47 | TX73_013235 | | cystathionine beta-lyase | 0.46 | TX73_019175 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 86 |
Pantoea sp. MT58 | 0.47 | IAI47_03215 | | cystathionine beta-lyase | 0.75 | IAI47_00890 | | methylenetetrahydrofolate reductase | low | > 76 |
Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_24330 | | cystathionine beta-lyase | 0.37 | AO353_08015 | | 5,10-methylenetetrahydrofolate reductase | low | > 101 |
Rhodospirillum rubrum S1H | 0.46 | Rru_A1613 | | Cystathionine beta-lyase (NCBI) | 0.51 | Rru_A1530 | | 5,10-methylenetetrahydrofolate reductase (NCBI) | low | > 58 |
Rhizobium sp. OAE497 | 0.45 | ABIE40_RS08820 | | cystathionine beta-lyase | 0.41 | ABIE40_RS11950 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 107 |
Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS08650 | | cystathionine beta-lyase | 0.54 | AZOBR_RS09540 | | 5 10-methylenetetrahydrofolate reductase | 0.76 | 28 |
Sinorhizobium meliloti 1021 | 0.45 | SMc02117 | | cystathionine beta-lyase | 0.35 | SMc01843 | | 5,10-methylenetetrahydrofolate reductase | 0.65 | 12 |
Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS11250 | | cystathionine beta-lyase | 0.36 | ABZR87_RS04865 | | methylenetetrahydrofolate reductase [NAD(P)H] | 0.33 | 33 |
Agrobacterium fabrum C58 | 0.43 | Atu1575 | | cystathionine beta lyase | 0.38 | Atu2123 | | methylenetetrahydrofolate reductase | low | > 89 |
Variovorax sp. OAS795 | 0.43 | ABID97_RS22430 | | cystathionine beta-lyase | 0.31 | ABID97_RS25015 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 91 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF5026 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.33 | GFF1692 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | — | — |
Azospirillum sp. SherDot2 | 0.42 | MPMX19_01339 | | Cystathionine beta-lyase MetC | 0.53 | MPMX19_00635 | | 5,10-methylenetetrahydrofolate reductase | low | > 112 |
Variovorax sp. SCN45 | 0.41 | GFF1749 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.31 | GFF2055 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 127 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_0607 | | cystathionine beta-lyase | 0.35 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_0607 | | cystathionine beta-lyase | 0.35 | Psyr_0459 | | 5,10-methylenetetrahydrofolate reductase | low | > 86 |
Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS02185 | | cystathionine beta-lyase | 0.36 | RPSI07_RS23495 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 81 |
Ralstonia solanacearum UW163 | 0.38 | UW163_RS18620 | | cystathionine beta-lyase | 0.36 | UW163_RS03705 | | methylenetetrahydrofolate reductase [NAD(P)H] | — | — |
Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS20555 | | cystathionine beta-lyase | 0.36 | RALBFv3_RS09875 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 76 |
Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS30610 | | cystathionine beta-lyase | 0.36 | RR42_RS01385 | | 5,10-methylenetetrahydrofolate reductase | low | > 128 |
Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS22165 | | cystathionine beta-lyase | 0.37 | QEN71_RS28715 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 153 |
Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_00859 | | cystathionine beta-lyase | 0.36 | H281DRAFT_05801 | | 5,10-methylenetetrahydrofolate reductase (NAD(P)) | low | > 103 |
Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_01491 | | cystathionine beta-lyase | 0.47 | CCNA_02224 | | methylenetetrahydrofolate reductase | low | > 67 |
Caulobacter crescentus NA1000 | 0.37 | CCNA_01491 | | cystathionine beta-lyase | 0.47 | CCNA_02224 | | methylenetetrahydrofolate reductase | low | > 66 |
Burkholderia phytofirmans PsJN | 0.36 | BPHYT_RS09190 | | cystathionine beta-lyase | 0.35 | BPHYT_RS18705 | | 5,10-methylenetetrahydrofolate reductase | low | > 109 |
Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS12385 | | PLP-dependent aspartate aminotransferase family protein | 0.34 | ABCV34_RS13550 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 48 |
Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS14995 | | cystathionine beta-lyase | 0.32 | HSERO_RS21425 | | 5,10-methylenetetrahydrofolate reductase | low | > 78 |
Ralstonia solanacearum GMI1000 | 0.34 | RS_RS08260 | | cystathionine beta-lyase | 0.36 | RS_RS00460 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 80 |
Bosea sp. OAE506 | 0.33 | ABIE41_RS01480 | | cystathionine beta-lyase | 0.51 | ABIE41_RS12475 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 77 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS05585 | | cystathionine beta-lyase | 0.46 | A4249_RS07925 | | methylenetetrahydrofolate reductase [NAD(P)H] | low | > 48 |
Acidovorax sp. GW101-3H11 | 0.26 | Ac3H11_4146 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.33 | Ac3H11_3045 | | 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) | low | > 79 |
Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02724 | | Cystathionine beta-lyase | 0.31 | MPMX26_01002 | | 5,10-methylenetetrahydrofolate reductase | low | > 36 |
Not shown: 0 genomes with orthologs for Sama_2008 only; 38 genomes with orthologs for Sama_3169 only