Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Shewanella amazonensis SB2B | 1.0 | Sama_2008 | | cystathionine beta-lyase (RefSeq) | 1.0 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 0.83 | 8 |
Shewanella oneidensis MR-1 | 0.83 | SO2191 | metC | cystathionine beta-lyase (NCBI ptt file) | 0.85 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.95 | 9 |
Shewanella sp. ANA-3 | 0.82 | Shewana3_2414 | | cystathionine beta-lyase (RefSeq) | 0.86 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | 0.91 | 8 |
Shewanella loihica PV-4 | 0.82 | Shew_1789 | | cystathionine beta-lyase (RefSeq) | 0.86 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.97 | 5 |
Vibrio cholerae E7946 ATCC 55056 | 0.65 | CSW01_08400 | | cystathionine beta-lyase | 0.70 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | low | > 62 |
Dickeya dadantii 3937 | 0.55 | DDA3937_RS01815 | | cystathionine beta-lyase | 0.71 | DDA3937_RS18125 | | 3-isopropylmalate dehydratase large subunit | 0.73 | 70 |
Dickeya dianthicola 67-19 | 0.55 | HGI48_RS01710 | | cystathionine beta-lyase | 0.70 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.72 | 50 |
Dickeya dianthicola ME23 | 0.55 | DZA65_RS01785 | | cystathionine beta-lyase | 0.70 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.88 | 10 |
Pectobacterium carotovorum WPP14 | 0.54 | HER17_RS19690 | | cystathionine beta-lyase | 0.70 | HER17_RS03075 | | 3-isopropylmalate dehydratase large subunit | 0.96 | 18 |
Serratia liquefaciens MT49 | 0.53 | IAI46_21725 | | cystathionine beta-lyase | 0.71 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | low | > 86 |
Rahnella sp. WP5 | 0.52 | EX31_RS08025 | | cystathionine beta-lyase | 0.72 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.43 | 38 |
Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS17315 | | cystathionine beta-lyase | 0.73 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | low | > 52 |
Escherichia coli ECRC101 | 0.52 | OKFHMN_18960 | metC | cystathionine beta-lyase | 0.72 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC101 | 0.52 | MCAODC_09475 | metC | cystathionine beta-lyase | 0.72 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC99 | 0.52 | KEDOAH_09185 | metC | cystathionine beta-lyase | 0.72 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC102 | 0.52 | NIAGMN_16725 | metC | cystathionine beta-lyase | 0.72 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.52 | GFF3120 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.72 | GFF166 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 78 |
Escherichia fergusonii Becca | 0.52 | EFB2_00802 | | Cystathionine beta-lyase MetC | 0.73 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | 0.38 | 28 |
Escherichia coli ECRC98 | 0.52 | JDDGAC_22595 | metC | cystathionine beta-lyase | 0.72 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli ECRC62 | 0.52 | BNILDI_00780 | metC | cystathionine beta-lyase | 0.73 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
Escherichia coli BL21 | 0.52 | ECD_02881 | | cystathionine beta-lyase, PLP-dependent | 0.73 | ECD_00074 | | 3-isopropylmalate dehydratase large subunit | low | > 60 |
Escherichia coli ECOR38 | 0.52 | HEPCGN_17825 | metC | cystathionine beta-lyase | 0.73 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 85 |
Escherichia coli ECOR27 | 0.52 | NOLOHH_10735 | metC | cystathionine beta-lyase | 0.73 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 57 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_00693 | | Cystathionine beta-lyase MetC | 0.73 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | low | > 73 |
Escherichia coli BW25113 | 0.51 | b3008 | metC | cystathionine beta-lyase (NCBI) | 0.73 | b0072 | leuC | isopropylmalate isomerase large subunit (NCBI) | 0.94 | 7 |
Klebsiella michiganensis M5al | 0.51 | BWI76_RS24285 | | cystathionine beta-lyase | 0.72 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.92 | 7 |
Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_3046 | | cystathionine beta-lyase, bacterial | 0.72 | EX28DRAFT_3668 | | 3-isopropylmalate dehydratase, large subunit | 0.92 | 6 |
Enterobacter sp. TBS_079 | 0.50 | MPMX20_03852 | | Cystathionine beta-lyase MetC | 0.72 | MPMX20_00767 | | 3-isopropylmalate dehydratase large subunit 1 | 0.95 | 4 |
Magnetospirillum magneticum AMB-1 | 0.50 | AMB_RS06585 | | cystathionine beta-lyase | 0.61 | AMB_RS20560 | | 3-isopropylmalate dehydratase large subunit | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.50 | Ga0059261_1388 | | cystathionine beta-lyase, bacterial | 0.55 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | low | > 68 |
Erwinia tracheiphila SCR3 | 0.49 | LU632_RS20545 | metC | cystathionine beta-lyase | 0.68 | LU632_RS02870 | leuC | 3-isopropylmalate dehydratase large subunit | 0.86 | 14 |
Rhodopseudomonas palustris CGA009 | 0.47 | TX73_013235 | | cystathionine beta-lyase | 0.61 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | — | — |
Pantoea sp. MT58 | 0.47 | IAI47_03215 | | cystathionine beta-lyase | 0.72 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | low | > 76 |
Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_24330 | | cystathionine beta-lyase | 0.59 | AO353_20620 | | isopropylmalate isomerase | low | > 101 |
Rhodospirillum rubrum S1H | 0.46 | Rru_A1613 | | Cystathionine beta-lyase (NCBI) | 0.63 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | low | > 58 |
Rhizobium sp. OAE497 | 0.45 | ABIE40_RS08820 | | cystathionine beta-lyase | 0.60 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | low | > 107 |
Azospirillum brasilense Sp245 | 0.45 | AZOBR_RS08650 | | cystathionine beta-lyase | 0.62 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.90 | 12 |
Sinorhizobium meliloti 1021 | 0.45 | SMc02117 | | cystathionine beta-lyase | 0.61 | SMc03823 | | isopropylmalate isomerase large subunit | 0.63 | 26 |
Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS11250 | | cystathionine beta-lyase | 0.59 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.32 | 42 |
Agrobacterium fabrum C58 | 0.43 | Atu1575 | | cystathionine beta lyase | 0.61 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.31 | 6 |
Variovorax sp. OAS795 | 0.43 | ABID97_RS22430 | | cystathionine beta-lyase | 0.58 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | — | — |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.43 | GFF5026 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.59 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 90 |
Azospirillum sp. SherDot2 | 0.42 | MPMX19_01339 | | Cystathionine beta-lyase MetC | 0.64 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | low | > 112 |
Variovorax sp. SCN45 | 0.41 | GFF1749 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.58 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 127 |
Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_0607 | | cystathionine beta-lyase | 0.60 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_0607 | | cystathionine beta-lyase | 0.60 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | low | > 86 |
Ralstonia solanacearum PSI07 | 0.39 | RPSI07_RS02185 | | cystathionine beta-lyase | 0.59 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | low | > 81 |
Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS20555 | | cystathionine beta-lyase | 0.59 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | low | > 76 |
Ralstonia solanacearum UW163 | 0.38 | UW163_RS18620 | | cystathionine beta-lyase | 0.59 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | — | — |
Cupriavidus basilensis FW507-4G11 | 0.38 | RR42_RS30610 | | cystathionine beta-lyase | 0.60 | RR42_RS14400 | | isopropylmalate isomerase | low | > 128 |
Paraburkholderia sabiae LMG 24235 | 0.38 | QEN71_RS22165 | | cystathionine beta-lyase | 0.59 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | low | > 153 |
Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_00859 | | cystathionine beta-lyase | 0.59 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | low | > 103 |
Caulobacter crescentus NA1000 | 0.37 | CCNA_01491 | | cystathionine beta-lyase | 0.57 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_01491 | | cystathionine beta-lyase | 0.57 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | low | > 67 |
Burkholderia phytofirmans PsJN | 0.36 | BPHYT_RS09190 | | cystathionine beta-lyase | 0.59 | BPHYT_RS33915 | | isopropylmalate isomerase | low | > 109 |
Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS12385 | | PLP-dependent aspartate aminotransferase family protein | 0.61 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | low | > 48 |
Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS14995 | | cystathionine beta-lyase | 0.59 | HSERO_RS16515 | | isopropylmalate isomerase | low | > 78 |
Ralstonia solanacearum GMI1000 | 0.34 | RS_RS08260 | | cystathionine beta-lyase | 0.59 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | low | > 80 |
Bosea sp. OAE506 | 0.33 | ABIE41_RS01480 | | cystathionine beta-lyase | 0.59 | ABIE41_RS11660 | | 3-isopropylmalate dehydratase large subunit | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.31 | A4249_RS05585 | | cystathionine beta-lyase | 0.51 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | low | > 48 |
Acidovorax sp. GW101-3H11 | 0.26 | Ac3H11_4146 | | Cystathionine beta-lyase (EC 4.4.1.8) | 0.58 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 79 |
Acinetobacter radioresistens SK82 | 0.24 | MPMX26_02724 | | Cystathionine beta-lyase | 0.58 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | low | > 36 |
Not shown: 0 genomes with orthologs for Sama_2008 only; 41 genomes with orthologs for Sama_0337 only