Conservation of cofitness between Dshi_1649 and Dshi_2132 in Dinoroseobacter shibae DFL-12

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_1649 alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) 1.0 Dshi_2132 amidophosphoribosyltransferase (RefSeq) 0.43 20
Phaeobacter inhibens DSM 17395 0.73 PGA1_c07890 cytoplasmic trehalase (AlgA) (from data) 0.82 PGA1_c10810 amidophosphoribosyltransferase PurF 0.32 11
Rhizobium sp. OAE497 0.63 ABIE40_RS03175 alpha-glucosidase 0.51 ABIE40_RS06270 amidophosphoribosyltransferase low > 107
Sinorhizobium meliloti 1021 0.63 SMc03064 alpha-glucosidase 0.50 SMc00554 amidophosphoribosyltransferase low > 103
Agrobacterium fabrum C58 0.62 Atu0594 alpha-glucosidase 0.49 Atu1075 amidophosphoribosyltransferase low > 89
Shewanella amazonensis SB2B 0.51 Sama_1662 alpha amylase, catalytic region (RefSeq) 0.27 Sama_2146 amidophosphoribosyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.51 Shew_1889 alpha amylase, catalytic region (RefSeq) 0.27 Shew_2302 amidophosphoribosyltransferase (RefSeq) 0.62 30
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_02445 amyA alpha-glucosidase 0.28 OKGIIK_05570 purF amidophosphoribosyltransferase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.2057.1 Maltodextrin glucosidase (EC 3.2.1.20) 0.28 Xcc-8004.4073.1 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 74
Lysobacter sp. OAE881 0.51 ABIE51_RS18995 alpha-glucosidase family protein 0.27 ABIE51_RS06180 amidophosphoribosyltransferase low > 62
Rhodanobacter denitrificans MT42 0.50 LRK55_RS12785 alpha-glucosidase family protein 0.28 LRK55_RS01105 amidophosphoribosyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS13085 alpha-glucosidase family protein 0.28 LRK54_RS01340 amidophosphoribosyltransferase low > 59
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS16975 alpha-glucosidase 0.27 ABZR86_RS06775 amidophosphoribosyltransferase low > 74
Pseudomonas stutzeri RCH2 0.49 Psest_0870 Alpha-glucosidase (EC 3.2.1.20) (from data) 0.26 Psest_2579 amidophosphoribosyltransferase low > 67
Shewanella sp. ANA-3 0.49 Shewana3_2311 Alpha-glucosidase (EC 3.2.1.20) (from data) 0.28 Shewana3_1483 amidophosphoribosyltransferase (RefSeq) 0.30 36
Variovorax sp. SCN45 0.49 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) 0.27 GFF3089 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 127
Shewanella oneidensis MR-1 0.48 SO2213 oligo-1,6-glucosidase (NCBI ptt file) 0.28 SO3064 purF amidophosphoribosyltransferase (NCBI ptt file) low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS09955 alpha-amylase family glycosyl hydrolase 0.49 A4249_RS03735 amidophosphoribosyltransferase
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_1580 Glycosidases 0.53 Ga0059261_3626 amidophosphoribosyltransferase (EC 2.4.2.14)
Caulobacter crescentus NA1000 0.44 CCNA_02368 alpha-glucosidase 0.52 CCNA_01730 amidophosphoribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_02368 alpha-glucosidase 0.52 CCNA_01730 amidophosphoribosyltransferase low > 67
Azospirillum sp. SherDot2 0.37 MPMX19_04220 Oligo-1,6-glucosidase 1 0.55 MPMX19_00906 Amidophosphoribosyltransferase low > 112
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS19395 alpha-amylase family glycosyl hydrolase 0.28 QEN71_RS17680 amidophosphoribosyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_02777 alpha-glucosidase 0.29 H281DRAFT_06060 amidophosphoribosyltransferase low > 103
Azospirillum brasilense Sp245 0.35 AZOBR_RS25735 alpha-amylase 0.56 AZOBR_RS08310 amidophosphoribosyltransferase low > 97
Rhodopseudomonas palustris CGA009 0.35 TX73_024730 alpha-amylase family glycosyl hydrolase 0.53 TX73_015990 amidophosphoribosyltransferase
Variovorax sp. OAS795 0.33 ABID97_RS27345 alpha-amylase family glycosyl hydrolase 0.26 ABID97_RS21635 amidophosphoribosyltransferase
Rhodospirillum rubrum S1H 0.32 Rru_A2294 Alpha amylase, catalytic region (NCBI) 0.55 Rru_A0404 Amidophosphoribosyl transferase (NCBI) low > 58
Pseudomonas sp. RS175 0.30 PFR28_01852 Oligo-1,6-glucosidase 1 0.27 PFR28_02811 Amidophosphoribosyltransferase low > 88
Bifidobacterium breve UCC2003 0.28 BBR_RS13250 alpha-glucosidase 0.43 BBR_RS13380 amidophosphoribosyltransferase low > 34
Rahnella sp. WP5 0.27 EX31_RS10265 alpha-glucosidase 0.27 EX31_RS19570 amidophosphoribosyltransferase low > 89
Serratia liquefaciens MT49 0.26 IAI46_12925 alpha-glucosidase 0.28 IAI46_17810 amidophosphoribosyltransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.27 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas fluorescens SBW25 0.25 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.27 PFLU_RS20515 amidophosphoribosyltransferase low > 109
Pseudomonas simiae WCS417 0.24 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.27 PS417_18535 amidophosphoribosyltransferase
Klebsiella michiganensis M5al 0.24 BWI76_RS02960 glucohydrolase 0.28 BWI76_RS20350 amidophosphoribosyltransferase
Escherichia fergusonii Becca 0.24 EFB2_04294 Trehalose-6-phosphate hydrolase 0.27 EFB2_01546 Amidophosphoribosyltransferase low > 86
Mycobacterium tuberculosis H37Rv 0.24 Rv2471 Probable alpha-glucosidase AglA (maltase) (glucoinvertase) (glucosidosucrase) (maltase-glucoamylase) (lysosomal alpha-glucosidase) (acid maltase) 0.37 Rv0808 Amidophosphoribosyltransferase PurF (glutamine phosphoribosylpyrophosphate amidotransferase) (ATASE) (gpatase)
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_03796 Trehalose-6-phosphate hydrolase 0.27 OHPLBJKB_01393 Amidophosphoribosyltransferase low > 73
Escherichia coli Nissle 1917 0.24 ECOLIN_RS24595 alpha,alpha-phosphotrehalase 0.27 ECOLIN_RS13405 amidophosphoribosyltransferase
Escherichia coli ECOR38 0.24 HEPCGN_10095 treC alpha,alpha-phosphotrehalase 0.27 HEPCGN_21910 purF amidophosphoribosyltransferase low > 85
Escherichia coli BL21 0.24 ECD_04107 trehalose-6-P hydrolase 0.27 ECD_02237 amidophosphoribosyltransferase low > 60
Escherichia coli ECOR27 0.24 NOLOHH_04165 treC alpha,alpha-phosphotrehalase 0.27 NOLOHH_14335 purF amidophosphoribosyltransferase
Escherichia coli ECRC62 0.24 BNILDI_07345 treC alpha,alpha-phosphotrehalase 0.27 BNILDI_13255 purF amidophosphoribosyltransferase
Escherichia coli BW25113 0.24 b4239 treC trehalose-6-P hydrolase (NCBI) 0.27 b2312 purF amidophosphoribosyltransferase (NCBI) low > 76
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.27 AO353_20690 amidophosphoribosyltransferase
Escherichia coli ECRC101 0.23 MCAODC_02405 treC alpha,alpha-phosphotrehalase 0.27 MCAODC_13755 purF amidophosphoribosyltransferase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF921 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.28 GFF1927 Amidophosphoribosyltransferase (EC 2.4.2.14) low > 78
Escherichia coli ECRC98 0.23 JDDGAC_15540 treC alpha,alpha-phosphotrehalase 0.27 JDDGAC_26675 purF amidophosphoribosyltransferase
Escherichia coli ECRC99 0.23 KEDOAH_16255 treC alpha,alpha-phosphotrehalase 0.27 KEDOAH_05480 purF amidophosphoribosyltransferase
Escherichia coli ECRC101 0.23 OKFHMN_11900 treC alpha,alpha-phosphotrehalase 0.27 OKFHMN_22715 purF amidophosphoribosyltransferase
Escherichia coli ECRC102 0.23 NIAGMN_09750 treC alpha,alpha-phosphotrehalase 0.27 NIAGMN_20485 purF amidophosphoribosyltransferase
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_04665 alpha,alpha-phosphotrehalase 0.27 CSW01_05115 amidophosphoribosyltransferase

Not shown: 3 genomes with orthologs for Dshi_1649 only; 46 genomes with orthologs for Dshi_2132 only