Conservation of cofitness between Dshi_1649 and Dshi_1888 in Dinoroseobacter shibae DFL-12

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dinoroseobacter shibae DFL-12 1.0 Dshi_1649 alpha-glucosidase / maltase / trehalase / sucrase (EC 3.2.1.48; EC 3.2.1.20; EC 3.2.1.28) (from data) 1.0 Dshi_1888 phosphoribosylglycinamide formyltransferase (RefSeq) 0.44 16
Phaeobacter inhibens DSM 17395 0.73 PGA1_c07890 cytoplasmic trehalase (AlgA) (from data) 0.71 PGA1_c13270 phosphoribosylglycinamide formyltransferase PurN 0.36 7
Rhizobium sp. OAE497 0.63 ABIE40_RS03175 alpha-glucosidase 0.51 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase low > 107
Sinorhizobium meliloti 1021 0.63 SMc03064 alpha-glucosidase 0.48 SMc00614 phosphoribosylglycinamide formyltransferase low > 103
Agrobacterium fabrum C58 0.62 Atu0594 alpha-glucosidase 0.42 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase low > 89
Shewanella amazonensis SB2B 0.51 Sama_1662 alpha amylase, catalytic region (RefSeq) 0.46 Sama_2098 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.51 Shew_1889 alpha amylase, catalytic region (RefSeq) 0.44 Shew_1512 phosphoribosylglycinamide formyltransferase (RefSeq) 0.60 47
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_02445 amyA alpha-glucosidase 0.44 OKGIIK_02310 purN phosphoribosylglycinamide formyltransferase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.2057.1 Maltodextrin glucosidase (EC 3.2.1.20) 0.38 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 74
Lysobacter sp. OAE881 0.51 ABIE51_RS18995 alpha-glucosidase family protein 0.36 ABIE51_RS15895 phosphoribosylglycinamide formyltransferase low > 62
Rhodanobacter denitrificans MT42 0.50 LRK55_RS12785 alpha-glucosidase family protein 0.42 LRK55_RS12640 phosphoribosylglycinamide formyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS13085 alpha-glucosidase family protein 0.42 LRK54_RS12940 phosphoribosylglycinamide formyltransferase low > 59
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS16975 alpha-glucosidase 0.42 ABZR86_RS19860 phosphoribosylglycinamide formyltransferase low > 74
Pseudomonas stutzeri RCH2 0.49 Psest_0870 Alpha-glucosidase (EC 3.2.1.20) (from data) 0.51 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 67
Shewanella sp. ANA-3 0.49 Shewana3_2311 Alpha-glucosidase (EC 3.2.1.20) (from data) 0.44 Shewana3_2546 purN phosphoribosylglycinamide formyltransferase (RefSeq) low > 73
Variovorax sp. SCN45 0.49 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) 0.44 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 127
Shewanella oneidensis MR-1 0.48 SO2213 oligo-1,6-glucosidase (NCBI ptt file) 0.44 SO2761 purN phosphoribosylglycinamide formyltransferase (NCBI ptt file) low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS09955 alpha-amylase family glycosyl hydrolase 0.45 A4249_RS08220 phosphoribosylglycinamide formyltransferase low > 48
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_1580 Glycosidases 0.47 Ga0059261_0229 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent low > 68
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_02368 alpha-glucosidase 0.47 CCNA_01774 phosphoribosylglycinamide formyltransferase low > 67
Caulobacter crescentus NA1000 0.44 CCNA_02368 alpha-glucosidase 0.47 CCNA_01774 phosphoribosylglycinamide formyltransferase low > 66
Azospirillum sp. SherDot2 0.37 MPMX19_04220 Oligo-1,6-glucosidase 1 0.49 MPMX19_01305 Phosphoribosylglycinamide formyltransferase
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS19395 alpha-amylase family glycosyl hydrolase 0.46 QEN71_RS03040 phosphoribosylglycinamide formyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_02777 alpha-glucosidase 0.42 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase low > 103
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_04855 alpha-amylase 0.28 CA264_18635 phosphoribosylglycinamide formyltransferase low > 74
Azospirillum brasilense Sp245 0.35 AZOBR_RS25735 alpha-amylase 0.49 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase low > 97
Rhodopseudomonas palustris CGA009 0.35 TX73_024730 alpha-amylase family glycosyl hydrolase 0.46 TX73_015790 phosphoribosylglycinamide formyltransferase
Variovorax sp. OAS795 0.33 ABID97_RS27345 alpha-amylase family glycosyl hydrolase 0.44 ABID97_RS07775 phosphoribosylglycinamide formyltransferase low > 91
Rhodospirillum rubrum S1H 0.32 Rru_A2294 Alpha amylase, catalytic region (NCBI) 0.49 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI)
Pseudomonas sp. RS175 0.30 PFR28_01852 Oligo-1,6-glucosidase 1 0.50 PFR28_03218 Phosphoribosylglycinamide formyltransferase low > 88
Rahnella sp. WP5 0.27 EX31_RS10265 alpha-glucosidase 0.45 EX31_RS22690 phosphoribosylglycinamide formyltransferase low > 89
Serratia liquefaciens MT49 0.26 IAI46_12925 alpha-glucosidase 0.44 IAI46_18890 phosphoribosylglycinamide formyltransferase low > 86
Pseudomonas fluorescens SBW25-INTG 0.25 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.50 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas fluorescens SBW25 0.25 PFLU_RS24710 alpha,alpha-phosphotrehalase 0.50 PFLU_RS22070 phosphoribosylglycinamide formyltransferase low > 109
Pseudomonas simiae WCS417 0.24 PS417_23045 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.50 PS417_20125 phosphoribosylglycinamide formyltransferase low > 88
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_835 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.50 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 87
Klebsiella michiganensis M5al 0.24 BWI76_RS02960 glucohydrolase 0.40 BWI76_RS20970 phosphoribosylglycinamide formyltransferase
Escherichia fergusonii Becca 0.24 EFB2_04294 Trehalose-6-phosphate hydrolase 0.42 EFB2_01398 Phosphoribosylglycinamide formyltransferase low > 86
Mycobacterium tuberculosis H37Rv 0.24 Rv2471 Probable alpha-glucosidase AglA (maltase) (glucoinvertase) (glucosidosucrase) (maltase-glucoamylase) (lysosomal alpha-glucosidase) (acid maltase) 0.28 Rv0956 Probable 5'-phosphoribosylglycinamide formyltransferase PurN (GART) (gar transformylase) (5'-phosphoribosylglycinamide transformylase)
Escherichia coli Nissle 1917 0.24 ECOLIN_RS24595 alpha,alpha-phosphotrehalase 0.42 ECOLIN_RS14195 phosphoribosylglycinamide formyltransferase low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_03796 Trehalose-6-phosphate hydrolase 0.42 OHPLBJKB_01226 Phosphoribosylglycinamide formyltransferase low > 73
Escherichia coli ECOR38 0.24 HEPCGN_10095 treC alpha,alpha-phosphotrehalase 0.42 HEPCGN_20970 purN phosphoribosylglycinamide formyltransferase low > 85
Escherichia coli BL21 0.24 ECD_04107 trehalose-6-P hydrolase 0.42 ECD_02392 phosphoribosylglycinamide formyltransferase 1 low > 60
Escherichia coli ECOR27 0.24 NOLOHH_04165 treC alpha,alpha-phosphotrehalase 0.42 NOLOHH_13455 purN phosphoribosylglycinamide formyltransferase
Escherichia coli ECRC62 0.24 BNILDI_07345 treC alpha,alpha-phosphotrehalase 0.42 BNILDI_12265 purN phosphoribosylglycinamide formyltransferase
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_15985 Alpha,alpha-phosphotrehalase (EC 3.2.1.93) (from data) 0.48 AO353_02685 phosphoribosylglycinamide formyltransferase low > 101
Escherichia coli BW25113 0.24 b4239 treC trehalose-6-P hydrolase (NCBI) 0.42 b2500 purN phosphoribosylglycinamide formyltransferase (NCBI) low > 76
Escherichia coli ECRC101 0.23 MCAODC_02405 treC alpha,alpha-phosphotrehalase 0.41 MCAODC_12335 purN phosphoribosylglycinamide formyltransferase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.23 GFF921 Trehalose-6-phosphate hydrolase (EC 3.2.1.93) 0.42 GFF2168 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) low > 78
Escherichia coli ECRC101 0.23 OKFHMN_11900 treC alpha,alpha-phosphotrehalase 0.41 OKFHMN_21805 purN phosphoribosylglycinamide formyltransferase
Escherichia coli ECRC98 0.23 JDDGAC_15540 treC alpha,alpha-phosphotrehalase 0.41 JDDGAC_25750 purN phosphoribosylglycinamide formyltransferase
Escherichia coli ECRC102 0.23 NIAGMN_09750 treC alpha,alpha-phosphotrehalase 0.41 NIAGMN_19575 purN phosphoribosylglycinamide formyltransferase
Escherichia coli ECRC99 0.23 KEDOAH_16255 treC alpha,alpha-phosphotrehalase 0.42 KEDOAH_06415 purN phosphoribosylglycinamide formyltransferase
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_04665 alpha,alpha-phosphotrehalase 0.42 CSW01_11355 phosphoribosylglycinamide formyltransferase
Echinicola vietnamensis KMM 6221, DSM 17526 0.19 Echvi_2850 Alpha-amylase (EC 3.2.1.1) (from data) 0.26 Echvi_1470 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent

Not shown: 1 genomes with orthologs for Dshi_1649 only; 43 genomes with orthologs for Dshi_1888 only