Conservation of cofitness between b1849 and b3406 in Escherichia coli BW25113

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1849 purT phosphoribosylglycinamide formyltransferase 2 (NCBI) 1.0 b3406 greB transcription elongation factor GreB (NCBI) 0.17 20
Escherichia coli ECRC62 0.99 BNILDI_15655 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 BNILDI_02700 greB transcription elongation factor GreB — —
Escherichia coli BL21 0.99 ECD_01820 phosphoribosylglycinamide formyltransferase 2 1.00 ECD_03258 transcript cleavage factor low > 60
Escherichia coli ECOR27 0.99 NOLOHH_16860 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 NOLOHH_08820 greB transcription elongation factor GreB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01880 Formate-dependent phosphoribosylglycinamide formyltransferase 1.00 OHPLBJKB_00297 Transcription elongation factor GreB low > 73
Escherichia coli ECRC98 0.99 JDDGAC_00925 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 JDDGAC_20660 greB transcription elongation factor GreB — —
Escherichia fergusonii Becca 0.99 EFB2_02094 Formate-dependent phosphoribosylglycinamide formyltransferase 1.00 EFB2_00422 Transcription elongation factor GreB low > 86
Escherichia coli ECRC102 0.99 NIAGMN_01710 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 NIAGMN_14800 greB transcription elongation factor GreB — —
Escherichia coli ECRC101 0.99 OKFHMN_26350 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 OKFHMN_17030 greB transcription elongation factor GreB — —
Escherichia coli ECRC101 0.99 MCAODC_19055 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 MCAODC_07560 greB transcription elongation factor GreB — —
Escherichia coli ECOR38 0.99 HEPCGN_04755 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 HEPCGN_15840 greB transcription elongation factor GreB low > 85
Escherichia coli ECRC99 0.99 KEDOAH_01755 purT formate-dependent phosphoribosylglycinamide formyltransferase 1.00 KEDOAH_11110 greB transcription elongation factor GreB — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF1628 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.94 GFF612 Transcription elongation factor GreB low > 78
Klebsiella michiganensis M5al 0.86 BWI76_RS18090 phosphoribosylglycinamide formyltransferase 2 0.92 BWI76_RS26660 transcription elongation factor GreB 0.16 49
Enterobacter sp. TBS_079 0.84 MPMX20_02754 Formate-dependent phosphoribosylglycinamide formyltransferase 0.93 MPMX20_04293 Transcription elongation factor GreB low > 85
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0707 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) 0.93 EX28DRAFT_4137 transcription elongation factor GreB low > 76
Erwinia tracheiphila SCR3 0.82 LU632_RS13350 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.89 LU632_RS22950 greB transcription elongation factor GreB low > 74
Pantoea sp. MT58 0.80 IAI47_08505 formate-dependent phosphoribosylglycinamide formyltransferase 0.85 IAI47_01810 transcription elongation factor GreB low > 76
Dickeya dianthicola ME23 0.78 DZA65_RS10590 formate-dependent phosphoribosylglycinamide formyltransferase 0.74 DZA65_RS20845 transcription elongation factor GreB low > 75
Dickeya dadantii 3937 0.78 DDA3937_RS10145 formate-dependent phosphoribosylglycinamide formyltransferase 0.75 DDA3937_RS19625 transcription elongation factor GreB low > 74
Serratia liquefaciens MT49 0.77 IAI46_14770 formate-dependent phosphoribosylglycinamide formyltransferase 0.88 IAI46_23795 transcription elongation factor GreB low > 86
Dickeya dianthicola 67-19 0.77 HGI48_RS10175 formate-dependent phosphoribosylglycinamide formyltransferase 0.74 HGI48_RS19755 transcription elongation factor GreB low > 71
Pectobacterium carotovorum WPP14 0.77 HER17_RS11770 formate-dependent phosphoribosylglycinamide formyltransferase 0.70 HER17_RS01650 transcription elongation factor GreB low > 75
Rahnella sp. WP5 0.77 EX31_RS24735 formate-dependent phosphoribosylglycinamide formyltransferase 0.86 EX31_RS04835 transcription elongation factor GreB low > 89
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_06215 phosphoribosylglycinamide formyltransferase 2 0.72 CSW01_13700 transcription elongation factor GreB low > 62
Shewanella sp. ANA-3 0.69 Shewana3_3197 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) 0.60 Shewana3_4014 transcription elongation factor GreB (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_2807 purT phosphoribosylglycinamide formyltransferase 2 (RefSeq) 0.64 Sama_3509 GreA/GreB family elongation factor (RefSeq) low > 62
Pseudomonas putida KT2440 0.68 PP_1457 Phosphoribosylglycinamide formyltransferase 2 0.75 PP_2315 Transcription elongation factor GreB low > 96
Shewanella oneidensis MR-1 0.68 SO3613 purT phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) 0.61 SO4631 greB transcription elongation factor GreB (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_5444 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.48 Pf6N2E2_2479 Transcription elongation factor GreB low > 103
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_879 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.75 Pf1N1B4_298 Transcription elongation factor GreB low > 87
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_17605 phosphoribosylglycinamide formyltransferase 0.48 AO356_03240 transcription elongation factor GreB low > 104
Pseudomonas sp. RS175 0.67 PFR28_03502 Formate-dependent phosphoribosylglycinamide formyltransferase 0.48 PFR28_00955 Transcription elongation factor GreB low > 88
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS24605 formate-dependent phosphoribosylglycinamide formyltransferase 0.75 PFLU_RS08340 transcription elongation factor GreB low > 109
Pseudomonas fluorescens SBW25 0.67 PFLU_RS24605 formate-dependent phosphoribosylglycinamide formyltransferase 0.75 PFLU_RS08340 transcription elongation factor GreB low > 109
Pseudomonas simiae WCS417 0.67 PS417_22945 phosphoribosylglycinamide formyltransferase 0.75 PS417_08390 transcription elongation factor GreB low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_04410 phosphoribosylglycinamide formyltransferase 0.48 AO353_18990 transcription elongation factor GreB low > 101
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1277 formate-dependent phosphoribosylglycinamide formyltransferase 0.75 Psyr_2065 transcription elongation factor GreB low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1277 formate-dependent phosphoribosylglycinamide formyltransferase 0.75 Psyr_2065 transcription elongation factor GreB low > 86
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4820 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.49 PfGW456L13_2216 Transcription elongation factor GreB low > 87
Pseudomonas sp. S08-1 0.67 OH686_17700 phosphoribosylglycinamide formyltransferase 2 0.52 OH686_01805 transcription elongation factor GreB low > 80
Kangiella aquimarina DSM 16071 0.66 B158DRAFT_2254 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) 0.47 B158DRAFT_1929 transcription elongation factor GreB low > 40
Marinobacter adhaerens HP15 0.65 HP15_1245 phosphoribosylglycinamide formyltransferase 2 0.48 HP15_3481 transcription elongation factor GreB low > 73
Pseudomonas stutzeri RCH2 0.64 Psest_3137 phosphoribosylglycinamide formyltransferase 2 0.51 Psest_2339 transcription elongation factor GreB low > 67
Xanthomonas campestris pv. campestris strain 8004 0.63 Xcc-8004.3846.1 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.46 Xcc-8004.1941.1 Transcription elongation factor GreB low > 74
Rhodanobacter denitrificans MT42 0.63 LRK55_RS14260 formate-dependent phosphoribosylglycinamide formyltransferase 0.46 LRK55_RS01545 transcription elongation factor GreB low > 63
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS14545 formate-dependent phosphoribosylglycinamide formyltransferase 0.45 LRK54_RS01765 transcription elongation factor GreB low > 59
Rhodanobacter sp. FW510-T8 0.63 OKGIIK_03390 purT formate-dependent phosphoribosylglycinamide formyltransferase 0.47 OKGIIK_04765 greB transcription elongation factor GreB low > 52
Lysobacter sp. OAE881 0.62 ABIE51_RS14525 formate-dependent phosphoribosylglycinamide formyltransferase 0.44 ABIE51_RS08175 transcription elongation factor GreB low > 62
Dechlorosoma suillum PS 0.59 Dsui_1003 phosphoribosylglycinamide formyltransferase 2 0.39 Dsui_3005 transcription elongation factor GreB low > 51
Paraburkholderia graminis OAS925 0.58 ABIE53_001433 phosphoribosylglycinamide formyltransferase 2 0.43 ABIE53_003228 transcription elongation factor GreB low > 113
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS06125 phosphoribosylglycinamide formyltransferase 0.43 BPHYT_RS15285 transcription elongation factor GreB low > 109
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS11090 phosphoribosylglycinamide formyltransferase 0.44 HSERO_RS10615 transcription elongation factor GreB low > 78
Variovorax sp. SCN45 0.54 GFF3604 Formate-dependent phosphoribosylglycinamide formyltransferase 0.39 GFF2374 Transcription elongation factor GreB low > 127
Acinetobacter radioresistens SK82 0.53 MPMX26_01866 Formate-dependent phosphoribosylglycinamide formyltransferase 0.65 MPMX26_00813 Transcription elongation factor GreB — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.53 GFF363 Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-) 0.38 GFF1033 Transcription elongation factor GreB 0.45 14
Variovorax sp. OAS795 0.52 ABID97_RS00805 formate-dependent phosphoribosylglycinamide formyltransferase 0.38 ABID97_RS23675 transcription elongation factor GreB low > 91
Azospirillum sp. SherDot2 0.51 MPMX19_05086 Formate-dependent phosphoribosylglycinamide formyltransferase 0.42 MPMX19_00337 Transcription elongation factor GreB low > 112
Sphingomonas koreensis DSMZ 15582 0.51 Ga0059261_3309 formate-dependent phosphoribosylglycinamide formyltransferase (EC 6.3.4.-) 0.36 Ga0059261_0216 transcription elongation factor GreB low > 68
Azospirillum brasilense Sp245 0.51 AZOBR_RS29810 phosphoribosylglycinamide formyltransferase 0.42 AZOBR_RS11855 transcription elongation factor GreB low > 97
Bifidobacterium breve UCC2003 0.43 BBR_RS13455 formate-dependent phosphoribosylglycinamide formyltransferase 0.22 BBR_RS14165 transcription elongation factor GreA — —

Not shown: 17 genomes with orthologs for b1849 only; 9 genomes with orthologs for b3406 only