Conservation of cofitness between b1232 and b3008 in Escherichia coli BW25113

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1232 purU formyltetrahydrofolate deformylase (NCBI) 1.0 b3008 metC cystathionine beta-lyase (NCBI) 0.75 8
Escherichia coli ECOR27 1.00 NOLOHH_20480 purU formyltetrahydrofolate deformylase 1.00 NOLOHH_10735 metC cystathionine beta-lyase low > 57
Escherichia coli BL21 1.00 ECD_01208 formyltetrahydrofolate hydrolase 0.99 ECD_02881 cystathionine beta-lyase, PLP-dependent low > 60
Escherichia coli ECOR38 1.00 HEPCGN_25030 purU formyltetrahydrofolate deformylase 0.99 HEPCGN_17825 metC cystathionine beta-lyase low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS07460 formyltetrahydrofolate deformylase 1.00 ECOLIN_RS17315 cystathionine beta-lyase low > 52
Escherichia fergusonii Becca 1.00 EFB2_02694 Formyltetrahydrofolate deformylase 0.99 EFB2_00802 Cystathionine beta-lyase MetC 0.25 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02453 Formyltetrahydrofolate deformylase 1.00 OHPLBJKB_00693 Cystathionine beta-lyase MetC low > 73
Escherichia coli ECRC102 1.00 NIAGMN_27665 purU formyltetrahydrofolate deformylase 0.99 NIAGMN_16725 metC cystathionine beta-lyase — —
Escherichia coli ECRC99 1.00 KEDOAH_25565 purU formyltetrahydrofolate deformylase 0.99 KEDOAH_09185 metC cystathionine beta-lyase — —
Escherichia coli ECRC98 1.00 JDDGAC_06005 purU formyltetrahydrofolate deformylase 0.99 JDDGAC_22595 metC cystathionine beta-lyase — —
Escherichia coli ECRC101 1.00 MCAODC_21690 purU formyltetrahydrofolate deformylase 0.99 MCAODC_09475 metC cystathionine beta-lyase — —
Escherichia coli ECRC101 1.00 OKFHMN_28570 purU formyltetrahydrofolate deformylase 0.99 OKFHMN_18960 metC cystathionine beta-lyase — —
Escherichia coli ECRC62 0.99 BNILDI_18635 purU formyltetrahydrofolate deformylase 1.00 BNILDI_00780 metC cystathionine beta-lyase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.90 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) 0.44 15
Klebsiella michiganensis M5al 0.96 BWI76_RS17290 formyltetrahydrofolate deformylase 0.88 BWI76_RS24285 cystathionine beta-lyase 0.43 23
Enterobacter sp. TBS_079 0.95 MPMX20_02596 Formyltetrahydrofolate deformylase 0.87 MPMX20_03852 Cystathionine beta-lyase MetC 0.58 20
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0858 formyltetrahydrofolate deformylase 0.88 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.60 4
Serratia liquefaciens MT49 0.90 IAI46_14265 formyltetrahydrofolate deformylase 0.76 IAI46_21725 cystathionine beta-lyase low > 86
Pectobacterium carotovorum WPP14 0.90 HER17_RS11065 formyltetrahydrofolate deformylase 0.78 HER17_RS19690 cystathionine beta-lyase 0.72 50
Pantoea sp. MT58 0.90 IAI47_09010 formyltetrahydrofolate deformylase 0.75 IAI47_03215 cystathionine beta-lyase low > 76
Dickeya dadantii 3937 0.90 DDA3937_RS10325 formyltetrahydrofolate deformylase 0.77 DDA3937_RS01815 cystathionine beta-lyase 0.81 22
Erwinia tracheiphila SCR3 0.89 LU632_RS12940 purU formyltetrahydrofolate deformylase 0.73 LU632_RS20545 metC cystathionine beta-lyase 0.62 60
Dickeya dianthicola ME23 0.89 DZA65_RS10810 formyltetrahydrofolate deformylase 0.76 DZA65_RS01785 cystathionine beta-lyase 0.66 38
Dickeya dianthicola 67-19 0.89 HGI48_RS10335 formyltetrahydrofolate deformylase 0.76 HGI48_RS01710 cystathionine beta-lyase low > 71
Rahnella sp. WP5 0.89 EX31_RS10115 formyltetrahydrofolate deformylase 0.77 EX31_RS08025 cystathionine beta-lyase low > 89
Vibrio cholerae E7946 ATCC 55056 0.73 CSW01_09940 formyltetrahydrofolate deformylase 0.61 CSW01_08400 cystathionine beta-lyase low > 62
Shewanella sp. ANA-3 0.70 Shewana3_2821 purU formyltetrahydrofolate deformylase (RefSeq) 0.51 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.53 46
Shewanella amazonensis SB2B 0.69 Sama_1134 purU formyltetrahydrofolate deformylase (RefSeq) 0.50 Sama_2008 cystathionine beta-lyase (RefSeq) 0.39 32
Shewanella oneidensis MR-1 0.68 SO1624 purU formyltetrahydrofolate deformylase (NCBI ptt file) 0.52 SO2191 metC cystathionine beta-lyase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.65 Shew_2640 purU formyltetrahydrofolate deformylase (RefSeq) 0.53 Shew_1789 cystathionine beta-lyase (RefSeq) 0.48 38
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_03710 formyltetrahydrofolate deformylase 0.38 AO353_24330 cystathionine beta-lyase low > 101
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS33925 formyltetrahydrofolate deformylase 0.34 QEN71_RS22165 cystathionine beta-lyase low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_4018 Formyltetrahydrofolate deformylase 0.33 Psyr_0607 cystathionine beta-lyase low > 86
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_4018 Formyltetrahydrofolate deformylase 0.33 Psyr_0607 cystathionine beta-lyase low > 86
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_01917 formyltetrahydrofolate deformylase 0.34 H281DRAFT_00859 cystathionine beta-lyase — —
Azospirillum sp. SherDot2 0.38 MPMX19_04711 Formyltetrahydrofolate deformylase 0.40 MPMX19_01339 Cystathionine beta-lyase MetC low > 112
Magnetospirillum magneticum AMB-1 0.38 AMB_RS18080 formyltetrahydrofolate deformylase 0.40 AMB_RS06585 cystathionine beta-lyase low > 64
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS02955 formyltetrahydrofolate deformylase 0.34 BPHYT_RS09190 cystathionine beta-lyase low > 109
Agrobacterium fabrum C58 0.38 Atu2464 formyltetrahydrofolate deformylase 0.38 Atu1575 cystathionine beta lyase low > 89
Sinorhizobium meliloti 1021 0.37 SMc04154 formyltetrahydrofolate deformylase 0.40 SMc02117 cystathionine beta-lyase — —
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4485 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.28 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8) — —
Azospirillum brasilense Sp245 0.37 AZOBR_RS21685 formyltetrahydrofolate deformylase 0.44 AZOBR_RS08650 cystathionine beta-lyase — —
Rhodospirillum rubrum S1H 0.37 Rru_A0556 Formyltetrahydrofolate deformylase (NCBI) 0.40 Rru_A1613 Cystathionine beta-lyase (NCBI) low > 58
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_1821 formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.44 Ga0059261_1388 cystathionine beta-lyase, bacterial low > 68
Variovorax sp. SCN45 0.37 GFF3790 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.36 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) low > 127
Ralstonia solanacearum UW163 0.37 UW163_RS11420 formyltetrahydrofolate deformylase 0.35 UW163_RS18620 cystathionine beta-lyase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS02305 formyltetrahydrofolate deformylase 0.35 RALBFv3_RS20555 cystathionine beta-lyase low > 76
Ralstonia solanacearum PSI07 0.36 RPSI07_RS15065 formyltetrahydrofolate deformylase 0.35 RPSI07_RS02185 cystathionine beta-lyase low > 81
Bosea sp. OAE506 0.36 ABIE41_RS02615 formyltetrahydrofolate deformylase 0.29 ABIE41_RS01480 cystathionine beta-lyase low > 77
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_03745 formyltetrahydrofolate deformylase 0.37 CCNA_01491 cystathionine beta-lyase low > 67
Rhizobium sp. OAE497 0.36 ABIE40_RS00960 formyltetrahydrofolate deformylase 0.40 ABIE40_RS08820 cystathionine beta-lyase low > 107
Caulobacter crescentus NA1000 0.36 CCNA_03745 formyltetrahydrofolate deformylase 0.37 CCNA_01491 cystathionine beta-lyase low > 66
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS13800 formyltetrahydrofolate deformylase 0.34 RR42_RS07655 cystathionine beta-lyase low > 128
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS14235 formyltetrahydrofolate deformylase 0.37 ABZR87_RS11250 cystathionine beta-lyase low > 80
Variovorax sp. OAS795 0.36 ABID97_RS00100 formyltetrahydrofolate deformylase 0.36 ABID97_RS22430 cystathionine beta-lyase — —
Ralstonia solanacearum GMI1000 0.36 RS_RS09460 formyltetrahydrofolate deformylase 0.32 RS_RS08260 cystathionine beta-lyase low > 80
Acinetobacter radioresistens SK82 0.36 MPMX26_00378 Formyltetrahydrofolate deformylase 0.22 MPMX26_02724 Cystathionine beta-lyase low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF2737 Formyltetrahydrofolate deformylase (EC 3.5.1.10) 0.41 GFF5026 Cystathionine beta-lyase (EC 4.4.1.8) low > 90
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS07970 formyltetrahydrofolate deformylase 0.31 HSERO_RS14995 cystathionine beta-lyase low > 78
Castellaniella sp019104865 MT123 0.35 ABCV34_RS06320 formyltetrahydrofolate deformylase 0.33 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein low > 48
Rhodopseudomonas palustris CGA009 0.34 TX73_020890 formyltetrahydrofolate deformylase 0.41 TX73_013235 cystathionine beta-lyase low > 86

Not shown: 29 genomes with orthologs for b1232 only; 2 genomes with orthologs for b3008 only