Conservation of cofitness between b2346 and b2494 in Escherichia coli BW25113

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2346 vacJ predicted lipoprotein (NCBI) 1.0 b2494 yfgC predicted peptidase (NCBI) 0.42 9
Escherichia coli ECRC99 1.00 KEDOAH_05660 mlaA phospholipid-binding lipoprotein MlaA 1.00 KEDOAH_06385 bepA beta-barrel assembly-enhancing protease
Escherichia coli ECRC98 1.00 JDDGAC_26495 mlaA phospholipid-binding lipoprotein MlaA 1.00 JDDGAC_25780 bepA beta-barrel assembly-enhancing protease
Escherichia coli ECRC101 1.00 OKFHMN_22535 mlaA phospholipid-binding lipoprotein MlaA 1.00 OKFHMN_21835 bepA beta-barrel assembly-enhancing protease
Escherichia coli ECRC101 1.00 MCAODC_13565 mlaA phospholipid-binding lipoprotein MlaA 1.00 MCAODC_12365 bepA beta-barrel assembly-enhancing protease
Escherichia coli BL21 1.00 ECD_02272 ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component 1.00 ECD_02386 OM protein maintenance and assembly metalloprotease and chaperone, periplasmic
Escherichia coli ECRC102 1.00 NIAGMN_20310 mlaA phospholipid-binding lipoprotein MlaA 1.00 NIAGMN_19605 bepA beta-barrel assembly-enhancing protease
Escherichia coli ECRC62 1.00 BNILDI_13080 mlaA phospholipid-binding lipoprotein MlaA 1.00 BNILDI_12295 bepA beta-barrel assembly-enhancing protease
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01360 putative phospholipid-binding lipoprotein MlaA 1.00 OHPLBJKB_01232 Beta-barrel assembly-enhancing protease 0.56 19
Escherichia coli ECOR27 1.00 NOLOHH_14170 mlaA phospholipid-binding lipoprotein MlaA 1.00 NOLOHH_13485 bepA beta-barrel assembly-enhancing protease low > 57
Escherichia coli ECOR38 0.99 HEPCGN_21730 mlaA phospholipid-binding lipoprotein MlaA 1.00 HEPCGN_21000 bepA beta-barrel assembly-enhancing protease low > 85
Escherichia fergusonii Becca 0.99 EFB2_01514 Intermembrane phospholipid transport system lipoprotein MlaA 0.99 EFB2_01404 Beta-barrel assembly-enhancing protease low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13570 phospholipid-binding lipoprotein MlaA 0.99 ECOLIN_RS14165 beta-barrel assembly-enhancing protease low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF1958 Lipoprotein 0.93 GFF2175 Exported zinc metalloprotease YfgC precursor low > 78
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0267 Surface lipoprotein 0.91 EX28DRAFT_0178 Putative Zn-dependent protease, contains TPR repeats low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03272 Intermembrane phospholipid transport system lipoprotein MlaA 0.90 MPMX20_03344 Beta-barrel assembly-enhancing protease low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS20475 phospholipid-binding lipoprotein MlaA 0.86 BWI76_RS20925 peptidase M48 0.39 32
Serratia liquefaciens MT49 0.79 IAI46_18065 phospholipid-binding lipoprotein MlaA 0.70 IAI46_18840 M48 family metallopeptidase low > 86
Pantoea sp. MT58 0.77 IAI47_06110 phospholipid-binding lipoprotein MlaA 0.74 IAI47_05205 M48 family metallopeptidase low > 76
Rahnella sp. WP5 0.76 EX31_RS19725 phospholipid-binding lipoprotein MlaA 0.69 EX31_RS22720 M48 family metallopeptidase low > 89
Pectobacterium carotovorum WPP14 0.73 HER17_RS06855 phospholipid-binding lipoprotein MlaA 0.70 HER17_RS15440 M48 family metallopeptidase low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS14625 phospholipid-binding lipoprotein MlaA 0.67 DDA3937_RS06050 M48 family metallopeptidase 0.64 11
Dickeya dianthicola ME23 0.71 DZA65_RS15515 phospholipid-binding lipoprotein MlaA 0.66 DZA65_RS06445 M48 family metallopeptidase low > 75
Erwinia tracheiphila SCR3 0.70 LU632_RS07300 mlaA phospholipid-binding lipoprotein MlaA 0.71 LU632_RS08305 M48 family metallopeptidase low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS14575 phospholipid-binding lipoprotein MlaA 0.66 HGI48_RS06095 M48 family metallopeptidase low > 71
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_10245 ABC transporter 0.42 CSW01_10785 hypothetical protein low > 62
Shewanella amazonensis SB2B 0.32 Sama_2268 vacJ lipoprotein, putative (RefSeq) 0.37 Sama_1913 peptidase M48, Ste24p (RefSeq) 0.50 22
Shewanella loihica PV-4 0.31 Shew_1395 VacJ family lipoprotein (RefSeq) 0.40 Shew_1841 peptidase M48, Ste24p (RefSeq) low > 60
Shewanella oneidensis MR-1 0.31 SO3197 vacJ lipoprotein, putative (NCBI ptt file) 0.39 SO2869 conserved hypothetical protein (NCBI ptt file) 0.35 34
Shewanella sp. ANA-3 0.30 Shewana3_1371 VacJ family lipoprotein (RefSeq) 0.38 Shewana3_1649 peptidase M48, Ste24p (RefSeq) 0.35 66
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS20385 ABC transporter 0.18 HSERO_RS03305 peptidase M48
Dechlorosoma suillum PS 0.25 Dsui_1401 surface lipoprotein 0.21 Dsui_0003 putative Zn-dependent protease 0.80 13
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS02540 VacJ family lipoprotein 0.17 ABZR87_RS08020 M48 family metalloprotease low > 80
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS06885 ABC transporter 0.17 RALBFv3_RS12125 peptidase M48 low > 76
Marinobacter adhaerens HP15 0.23 HP15_1860 VacJ family lipoprotein 0.16 HP15_2031 putative Zn-dependent protease, contains TPR repeats 0.51 18
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_00330 hypothetical protein 0.23 AO353_17645 peptidase M48 low > 101
Ralstonia solanacearum UW163 0.23 UW163_RS06730 ABC transporter 0.17 UW163_RS01485 peptidase M48
Pseudomonas sp. S08-1 0.23 OH686_22720 Outer-membrane-phospholipid-binding lipoprotein MlaA 0.24 OH686_19195 Exported zinc metalloprotease YfgC precursor low > 80
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4012 VacJ-like lipoprotein precursor 0.23 PfGW456L13_4512 Exported zinc metalloprotease YfgC precursor low > 87
Pseudomonas simiae WCS417 0.23 PS417_07710 membrane protein 0.21 PS417_07140 peptidase M48 low > 88
Ralstonia solanacearum PSI07 0.23 RPSI07_RS10350 ABC transporter 0.17 RPSI07_RS21205 peptidase M48 low > 81
Acidovorax sp. GW101-3H11 0.22 Ac3H11_4715 VacJ family lipoprotein 0.11 Ac3H11_1239 Peptidase M48, Ste24p precursor low > 79
Pseudomonas fluorescens SBW25 0.22 PFLU_RS07785 VacJ family lipoprotein 0.21 PFLU_RS07250 M48 family metallopeptidase 0.77 91
Pseudomonas fluorescens SBW25-INTG 0.22 PFLU_RS07785 VacJ family lipoprotein 0.21 PFLU_RS07250 M48 family metallopeptidase 0.35 78
Pseudomonas stutzeri RCH2 0.22 Psest_2712 Surface lipoprotein 0.22 Psest_1510 Putative Zn-dependent protease, contains TPR repeats 0.32 23
Pseudomonas putida KT2440 0.22 PP_2163 VacJ lipoprotein 0.24 PP_1232 conserved exported protein of unknown function 0.46 15
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS11860 VacJ family lipoprotein 0.18 ABZR86_RS00725 M48 family metalloprotease low > 74
Rhodanobacter denitrificans FW104-10B01 0.22 LRK54_RS11785 VacJ family lipoprotein 0.19 LRK54_RS15035 M48 family metalloprotease low > 59
Rhodanobacter denitrificans MT42 0.22 LRK55_RS11510 VacJ family lipoprotein 0.19 LRK55_RS14750 M48 family metalloprotease low > 63
Pseudomonas fluorescens FW300-N2C3 0.22 AO356_02190 hypothetical protein 0.24 AO356_04555 peptidase M48 0.59 5
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_62 VacJ-like lipoprotein precursor 0.22 Pf1N1B4_3327 Exported zinc metalloprotease YfgC precursor
Pseudomonas sp. RS175 0.21 PFR28_01139 Intermembrane phospholipid transport system lipoprotein MlaA 0.24 PFR28_00694 Beta-barrel assembly-enhancing protease low > 88
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_1910 VacJ-like lipoprotein 0.22 Psyr_1543 Peptidase M48, Ste24p low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_1910 VacJ-like lipoprotein 0.22 Psyr_1543 Peptidase M48, Ste24p low > 86
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2261 VacJ-like lipoprotein precursor 0.24 Pf6N2E2_2752 Exported zinc metalloprotease YfgC precursor 0.35 13
Variovorax sp. SCN45 0.21 GFF5337 Outer-membrane-phospholipid-binding lipoprotein MlaA 0.12 GFF5421 Peptidase M48, Ste24p precursor low > 127
Phaeobacter inhibens DSM 17395 0.21 PGA1_c29360 VacJ-like lipoprotein 0.08 PGA1_c20310 putative metalloprotease low > 62
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_12110 ABC transporter 0.18 OKGIIK_03795 Putative beta-barrel assembly-enhancing protease low > 52
Variovorax sp. OAS795 0.21 ABID97_RS23200 VacJ family lipoprotein 0.14 ABID97_RS02095 M48 family metalloprotease low > 91
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_1335 Surface lipoprotein 0.24 B158DRAFT_2440 Putative Zn-dependent protease, contains TPR repeats low > 40

Not shown: 7 genomes with orthologs for b2346 only; 6 genomes with orthologs for b2494 only